Research Article |
Corresponding author: Thomas Wesener ( t.wesener@zfmk.de ) Academic editor: Pavel Stoev
© 2016 Thomas Wesener, Karin Voigtländer, Peter Decker, Jan Philip Oeyen, Jörg Spelda.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Wesener T, Voigtländer K, Decker P, Oeyen JP, Spelda J (2016) Barcoding of Central European Cryptops centipedes reveals large interspecific distances with ghost lineages and new species records from Germany and Austria (Chilopoda, Scolopendromorpha). ZooKeys 564: 21-46. https://doi.org/10.3897/zookeys.564.7535
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In order to evaluate the diversity of Central European Myriapoda species in the course of the German Barcode of Life project, 61 cytochrome c oxidase I sequences of the genus Cryptops Leach, 1815, a centipede genus of the order Scolopendromorpha, were successfully sequenced and analyzed. One sequence of Scolopendra cingulata Latreille, 1829 and one of Theatops erythrocephalus Koch, 1847 were utilized as outgroups. Instead of the expected three species (C. parisi Brolemann, 1920; C. anomalans Newport, 1844; C. hortensis (Donovan, 1810)), analyzed samples included eight to ten species. Of the eight clearly distinguishable morphospecies of Cryptops, five (C. parisi; C. croaticus Verhoeff, 1931; C. anomalans; C. umbricus Verhoeff, 1931; C. hortensis) could be tentatively determined to species level, while a further three remain undetermined (one each from Germany, Austria and Croatia, and Slovenia). Cryptops croaticus is recorded for the first time from Austria. A single specimen (previously suspected as being C. anomalans), was redetermined as C. umbricus Verhoeff, 1931, a first record for Germany. All analyzed Cryptops species are monophyletic and show large genetic distances from one another (p-distances of 13.7–22.2%). Clear barcoding gaps are present in lineages represented by >10 specimens, highlighting the usefulness of the barcoding method for evaluating species diversity in centipedes. German specimens formally assigned to C. parisi are divided into three clades differing by 8.4–11.3% from one another; their intra-lineage genetic distance is much lower at 0–1.1%. The three clades are geographically separate, indicating that they might represent distinct species. Aside from C. parisi, intraspecific distances of Cryptops spp. in Central Europe are low (<3.3%).
Barcode, biodiversity, COI, cryptic diversity, introduced species
The German Barcode of Life project – Myriapoda was started in 2012 with the aim to construct a library of reference sequences from the 200 indigenous Diplopoda and Chilopoda species of Germany (
Such a problem of taxonomic confusion applies in particular to the family Cryptopidae of the centipede order Scolopendromorpha. The Cryptopidae show an almost worldwide distribution, as they are present on most continents and many islands (
In Germany and most of Central Europe, the only Scolopendromorpha that occur naturally are two widely distributed species of the genus Cryptops: C. parisi and C. hortensis (
A third species, C. anomalans, is a recent addition to the German fauna (
There are only a handful of barcoding and phylogenetic studies applying molecular data of Scolopendromorpha worldwide (
Barcoding studies inside the Scolopendromorpha consecutively revealed large interspecific distances (
The aim of this study is to see if barcoding of Cryptops allows (a) a clear separation of the species found in Germany; (b) enables the detection of potential cryptic lineages in the widespread German species; as well as (c) facilitating the correct identification of morphologically distinct specimens from Central Europe.
The focus of the project was Cryptops from Germany, which encompass 85% of the here analysed specimens of the genus (Fig.
Distribution map of all successfully sequenced Central European specimens of Cryptops. Numbers refer to each specimen (see Table
GBOL numbers, GenBank codes, locality data. GBOL number refers to DNA extraction and BOLD registration; L Nr refers to number of Map (Figure
L Nr | GBOL | GenBank | Voucher | Species | Locality |
---|---|---|---|---|---|
GBOL02755 | KU497147 |
|
Scolopendra cingulata | Croatia, Istra, Umag | |
GBOL02750 | KU497149 |
|
Theatops erythrocephalus | Croatia, Istra, Brestova | |
1 |
|
KM491707 |
|
Cryptops hortensis | Germany, Waren (Müritz), Nationalpark Müritz |
1 |
|
KM491678 |
|
Cryptops hortensis | Germany, Waren (Müritz), Nationalpark Müritz |
2 |
|
KU342047 |
|
Cryptops hortensis | Germany, Potsdam, Babelsberg |
2 |
|
KU342045 |
|
Cryptops hortensis | Germany, Potsdam, Babelsberg |
3 |
|
KM491700 |
|
Cryptops hortensis | Germany, Ilsenburg |
4 |
|
KM491595 |
|
Cryptops hortensis | Germany, Friedeburg (Saale) |
4 |
|
KM491677 |
|
Cryptops hortensis | Germany, Friedeburg (Saale) |
5 |
|
KU342043 |
|
Cryptops hortensis | Germany, Hoyerswerda, Dubringer Moor |
6 |
|
KM491615 |
|
Cryptops hortensis | Germany, Bonn - Bad Godesberg, Panoramapark |
7 |
|
KU342044 |
|
Cryptops hortensis | Germany, Niederzissen, Bausenberg |
8 | GBOL14853 | KU497144 |
|
Cryptops hortensis | Germany, Enzberg, Kieselbronn |
9 | GBOL02747 | KU497160 |
|
Cryptops hortensis | Germany, Zuckerberg SW Stuttgart-Steinhaldenfeld |
9 | GBOL10885 | KU497162 |
|
Cryptops hortensis | Germany, Zuckerberg SW Stuttgart-Steinhaldenfeld |
10 | GBOL14855 | KU497145 |
|
Cryptops hortensis | Germany, Kenzingen, Forlenwald |
11 | GBOL14854 | KU497155 |
|
Cryptops hortensis | Germany, Badenweiler, Schweighof (Eselsgrabenfelsen), |
12 |
|
KM491565 |
|
Cryptops hortensis | Germany, Mainau island, 4 km NNE Konstanz |
13 | GBOL14858 | KU497146 |
|
Cryptops hortensis | Germany, Mainau island, 4 km NNE Konstanz |
14 |
|
KU342046 |
|
Cryptops hortensis | Italy, Provincia di Sondrio, Chiavenna, Riserva Naturale Marmitte dei Giganti |
15 |
|
KM491610 |
|
Cryptops parisi | Germany, Bochum, Botanical Garden of the Ruhr-University |
16 |
|
|
Cryptops parisi | Germany, Leipzig-Schönefeld, Partheaue | |
17 |
|
KM491698 |
|
Cryptops parisi | Germany, Schwelm-Erlen, nahe Eingang Erlenhöhle, |
18 |
|
KM491624 |
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Cryptops parisi | Germany, Wuppertal, NSG ‚Im Hölken‘ |
19 |
|
KM491666 |
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Cryptops parisi | Germany, Weißenberg, Gröditzer Skala |
20 |
|
KU342051 |
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Cryptops parisi | Germany, Stromberg (Windeck) |
21 |
|
KM491556 |
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Cryptops parisi | Germany, Seelbach bei Hamm (Sieg), Marienthal |
21 |
|
KM491664 |
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Cryptops parisi | Germany, Seelbach bei Hamm (Sieg), Marienthal |
22 |
|
KM491557 |
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Cryptops parisi | Germany, Bonn - Oberkassel, unterhalb Steinbruch, |
23 |
|
KM491702 |
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Cryptops parisi | Germany, Bonn - Röttgen, Kottenforst, Naturwaldzelle‚ Oberm Jägerkreuz‘ |
24 |
|
KM491590 |
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Cryptops parisi | Germany, Wachtberg, Kottenforst bei Pech |
25 |
|
KM491588 |
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Cryptops parisi | Germany, Niederzissen, Bausenberg |
26 |
|
KU342054 |
|
Cryptops parisi | Germany, Lichtenberg, NSG Höllental |
27 | GBOL14862 | KU497148 |
|
Cryptops parisi | Germany, Lusen, Winterweg |
28 |
|
KM491592 |
|
Cryptops parisi | Germany, Ludwigsburg, Salonwald |
29 | GBOL14843 | KU497154 |
|
Cryptops parisi | Germany, Felswandergebiet (siev.) 4 km E Neuschoenau, 10 km NE Grafenau |
30 | GBOL14863 | KU497157 |
|
Cryptops parisi | Germany, 1 km SE Pfuenz, 7 km ESE Eichstaett |
31 | GBOL11259 | KU497163 |
|
Cryptops parisi | Germany, W Unterfrohnstetten, 4 km NNW Hengersberg |
32 | BCZSMMYR00490 | JN266284 |
|
Cryptops parisi | Germany, Esslingen-St. Bernhard, Laienweg 33 |
32 | GBOL11266 | KU497150 |
|
Cryptops parisi | Germany, Esslingen-St. Bernhard, Laienweg 33 |
33 | GBOL14856 | KU497152 |
|
Cryptops parisi | Germany, Esslinger Burg N Esslingen-Stadtmitte |
34 | GBOL14859 | KU497161 |
|
Cryptops parisi | Germany, St. Johann-Fohlenhof, 4 km WSW Bad Urach |
35 |
|
KM491560 |
|
Cryptops parisi | Germany, Wendelstein, Ueber der Glonn, 1 km WSW Glonnbercha |
36 | GBOL02712 | KU497164 |
|
Cryptops parisi | Germany, Schwarzhoelzl, 2 km NE Karlsfeld |
37 |
|
KU342050 |
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Cryptops parisi | Austria, Schneeberg unten |
38 | BCZSMMYR00493 | JN266285 |
|
Cryptops parisi | Austria, NW Weinbachbauernhof 1 km NE Strobl, 8 km WNW Bad Ischl |
39 | GBOL14860 | KU497156 |
|
Cryptops parisi | Austria, Kaltenbach NNE Ruine Wildenstein, 1 km SW Bad Ischl |
40 | GBOL14861 | KU497141 |
|
Cryptops parisi | Germany, W slope of Lercheck, 1 km NW Unterau, 5 km NE Berchtesgaden |
41 | GBOL02742 | KU497140 |
|
Cryptops parisi | Germany, SW Grafenaschau, 8 km SW Murnau |
42 |
|
KU342053 |
|
Cryptops parisi | Germany, Bad Toelz, Altjoch |
43 |
|
KU342055 |
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Cryptops parisi sebini | Italy, Lombardia, Brescia, Pisogne, Type locality |
GBOL12332 | KU497142 |
|
Cryptops parisi | UK, Wales, Aberbargoed, | |
44 |
|
KM491706 |
|
Cryptops anomalans | Germany, Leipzig, Pleißemühlgraben |
45 |
|
KM491703 |
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Cryptops anomalans | Germany, Bonn, Friesdorf |
46 |
|
KM491699 |
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Cryptops anomalans | Germany, Bonn - Bad Godesberg, Panoramapark |
46 |
|
KM491639 |
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Cryptops anomalans | Germany, Bonn - Bad Godesberg, Panoramapark |
47 | BCZSMMYR00489 | JN266286 |
|
Cryptops umbricus | Germany, Langenaltheimer Haardt 1 km W Solnhofen, 4 km S Pappenheim |
48 | GBOL02745 | KU497151 |
|
Cryptops anomalans | Germany, Hummelgraben, Stuttgart-Zuffenhausen |
49 | GBOL14852 | KU497158 |
|
Cryptops anomalans | Germany, SW Stuttgart-Muehlhausen |
50 | GBOL14950 | KU497159 |
|
Cryptops anomalans | Germany, Ailenberg SE Stuttgart-Obertuerkheim, 1 km WSW Ruedern |
51 |
|
KU342049 |
|
Cryptops croaticus | Austria, Leithagebirge, Zeiler Berg |
52 |
|
KU342048 |
|
Cryptops croaticus | Austria, Leithagebirge I |
53 |
|
KM491620 |
|
Cryptops sp. | Austria, Burgenland, Rosaliakapelle |
54 | GBOL14960 | KU497153 |
|
Cryptops sp. | Croatia, NW Baci and Brestova, 10 km NE Labin |
55 |
|
KU342042 |
|
Cryptops sp. | Germany, Saxony, Leipzig, Zoo, Gondwanaland |
56 | GBOL14857 | KU497143 |
|
Cryptops sp. | Slovenia, Osojca 2 km NW Zagon, 5 km NW Postojna |
The specimens were collected by hand and transferred to vials containing 95% undenatured ethanol within days of collection. The vials contain an individual GBOL number with which the specimens can be connected to the accompanying data. After conservation the specimens were either sent to the GBOL facility at the
Maps were created with ArcGIS 10.
At the ZFMK, DNA was extracted from the tissue samples using the BioSprint96 magnetic bead extractor by Qiagen (Germany). After the extraction, samples were outsourced for PCR and sequencing (BGI China). For PCR and sequencing, the degenerated primer pair HCOJJ/LCOJJ (
At the ZSM, a single leg was removed from each specimen and sent in 96 well lysis plates to the Canadian Centre for DNA Barcoding (CCDB, Guelph, Canada) for standardized, high-throughput DNA extraction, PCR amplification and bidirectional Sanger sequencing (http://www.ccdb.ca/resources.php). For PCR and sequencing, a primer cocktail (
List of primers used for amplification and sequencing of the 5’ part of the mitochondrial COI gene.
Primer name | Sequence | Publication | Used at |
---|---|---|---|
LCO1490 | 5‘-GGTCAACAAATCATAAAGATATTGG |
|
CCDB for |
HCO2198 | 5‘-TAAACTTCAGGGTGACCAAAAAATCA |
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CCDB for |
LepF1 | 5‘-ATTCAACCAATCATAAAGATATTGG |
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CCDB for |
LepR1 | 5‘-TAAACTTCTGGATGTCCAAAAAATCA |
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CCDB for |
C_LepFolF | cocktail of LepF1 and LCO1490 | www.boldsystems.org/index.php/Public_Primer_PrimerSearch |
CCDB for |
C_LepFolR | cocktail of LepR1 and HCO2198 | www.boldsystems.org/index.php/Public_Primer_PrimerSearch |
CCDB for |
LCO1490-JJ | 5‘-CHACWAAYCATAAAGATATYGG |
|
|
HCO2198-JJ | 5‘-AWACTTCVGGRTGVCCAAARAATCA |
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Sequences were obtained for 61 Cryptops as well as the two outgroup specimens. The three available sequences of Central European Cryptops were added from a previously published dataset (
Sequences were aligned by hand in Bioedit (
The number of base differences per site between sequences is shown in figures and tables (Fig.
The monophyly of the genus Cryptops is strongly supported (97%) in our tree (Fig.
Maximum likelihood tree under the GTR+G+I model, 1000 bootstrap replicates. Colours and symbols correspond to Maps (Figs
The monophyly of the 18 specimens of C. hortensis is strongly supported (100%). Of the shallow clades inside C. hortensis (Fig.
The clade uniting C. parisi sensu lato and C. croaticus receives high statistical support (96%). While both specimens of C. croaticus show the same haplotype, the 32 specimens of C. parisi s. l. are separated into three statistically well-supported (99–100%) clades. The basalmost clade (Fig.
Cryptops specimens differ from the outgroups Scolopendra and Theatops by 19.8–25.7% (Supplementary Material 2). Interspecific and intraspecific distances of the different nominal Cryptops species show no overlap (Fig.
Clear intraspecific distances in German or even Central European Cryptops are low. The specimens filling the majority of our barcoding gap between 3 and 11.3% are the different lineages of C. parisi, which differ by 8.4–11.3% from one another (Fig.
Cryptops parisi and C. hortensis belong to the South European and Central Asiatic European chorotypes respectively (
Cryptops parisi is generally classified as a mesophilous woodland species (
The two clearly differentiated genetical lineages in C. parisi s. s. in Germany (see below) are reflected in distinct ecological differences in the preferred habitats between the western and eastern parts of Germany. In the more Atlantic areas in the West, the species prefers woodland like in its main distribution area. In the more continental influenced East, C. parisi inhabits open-dry habitats such as dry meadows, mesoxeric meadows and their successional shrub-stages, as well as dwarf-shrub heaths (
C. anomalans is viewed as a species introduced to Germany and England (
Our analyses first showed one outlier C. anomalans specimen from Solnhofen, Bavaria (Fig.
Cryptops sp. 1 is only represented in our dataset by a single specimen from Slovenia, which is unfortunately missing the pre-ultimate legs and can therefore not easily be determined morphologically.
Cryptops sp. 2 is represented by two specimens that are separated by a wide genetic distance of 15.9%. This distance usually falls right into the lower limit observed between different Cryptops species (Fig.
These two specimens are similar to C. hortensis, but are missing the ventral furrow on the prefemora of the ultimate leg pair. An available name for one of these lines might be C. rucneri Matic, 1966. This species was synonymised with C. hortensis by
Maybe this specimen is the same species to which
Of the two specimens of Cryptops sp. 2, the one from Brestova is the most probable to represent C. rucneri. This specimen was collected only 30 kilometres distant from the type locality of C. rucneri and shows the characteristic elongated 20th leg pair, which is unfortunately missing in the other specimen (as well as in our Cryptops sp. 1). Nevertheless, while having only three sequences of these eastern C. hortensis-relatives and without being able to provide a revision of the hortensis/rucneri-complex we prefer at the moment to keep these specimens under the name Cryptops sp.
Cryptops sp. 3, previously determined as C. cf. doriae Pocock, 1891 is only known from the Leipzig Zoo in eastern Germany, where it was collected in a large tropical greenhouse (
Cryptops croaticus was originally described from Bakar (formerly Buccari) in Croatia (
The three lineages of specimens placed in C. parisi by morphological characters differ 8.4–11.3% from one another, while their intra-lineage genetic distance is much lower at 0–1.1%. A large barcoding gap becomes clearly visible in our dataset when we treat the three different lineages of C. parisi as separate species (Figs
One lineage clearly represents the C. parisi sensu stricto (Fig.
A second distinct group (Fig.
The specimens of C. parisi s. l. belonging to a third group (Fig.
However, the large genetic distance of 10–11.3% between C. parisi lineage 3 and C. parisi s. s. as well as to the lineage containing C. parisi sebini, combined with a low intraspecific distance (0–1.1%) are clear indications that these specimens might represent a species of its own.
To find names for our two eastern lines of C. parisi one has to go back to C. L. Koch, who described three Cryptops species from around Regensburg, Germany: C. ochraceus C. L. Koch, 1844 from the Keilstein (a calcareous mountain east of Regensburg), C. sylvaticus C. L. Koch, 1844 from the Naab-valley (north of Regensburg) and C. pallens C. L. Koch, 1847 from the moat of Regensburg. More information on these species, such as the precise type localities and more detailed descriptions, are provided in
It should be noted that
Future prospects should include the parallel sequencing of nuclear genes to confirm the relationships drawn from the mitochondrial barcoding fragment. To clarify the taxonomic relationships within Cryptops parisi, it would be important to collect further samples to enable an extensive morphological evaluation.
We are thankful to H. Mölleken (Ressort Umweltschutz, Stadt Wuppertal), W. Wasch (Personal- und Organisationsamt, Bundesstadt Bonn), M. Ehling (Struktur- und Genehmigungsdirektion Nord, Rhineland-Palatine), F. Makiolczyk (Amt für Natur- und Landschaftsschutz, Rhein-Sieg-Kreis), and J. Müller (Nationalparkverwaltung Bayerischer Wald) for providing collection permits for natural protection areas. We also thank the local authorities in Austria (Amt der Burgenländischen Landesregierung and Niederösterreichischen Landesregierung) for granting us collection permits.
Christan Owen (Aberbargoed, Wales, UK) provided material of C. parisi for this study. T. Klug (
Two reviewers, V. Vahtera and W. Siriwut, as well as the editor P. Stoev provided much advice and corrections that greatly enhanced the quality of this work.
This is a publication of the German Barcode of Life (GBOL) project of the Humboldt Ring, financed by the German Federal Ministry for Education and Research (FKZ 01LI1101A and FKZ 01LI1101B). The publication of this article was funded by the Open Access fund of the Leibniz Association.
Full specimen information
Data type: occurence
Explanation note: Full specimen information.
Uncorrected P-Distance
Data type: measurements
Explanation note: Uncorrected P-Distance between the 66 analyzed specimens.