Research Article |
Corresponding author: Gizelle Amora ( gizelleamora@gmail.com ) Academic editor: Fabio Laurindo Da Silva
© 2015 Gizelle Amora, Neusa Hamada, Lívia Maria Fusari, Vanderly Andrade-Souza.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Amora G, Hamada N, Fusari LM, Andrade-Souza V (2015) An Asiatic Chironomid in Brazil: morphology, DNA barcode and bionomics. ZooKeys 514: 129-144. https://doi.org/10.3897/zookeys.514.9925
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In most freshwater ecosystems, aquatic insects are dominant in terms of diversity; however, there is a disproportionately low number of records of alien species when compared to other freshwater organisms. The Chironomidae is one aquatic insect family that includes some examples of alien species around the world. During a study on aquatic insects in Amazonas state (Brazil), we collected specimens of Chironomidae that are similar, at the morphological level, to Chironomus kiiensis Tokunaga and Chironomus striatipennis Kieffer, both with distributions restricted to Asia. The objectives of this study were to provide morphological information on this Chironomus population, to investigate its identity using DNA barcoding and, to provide bionomic information about this species. Chironomus DNA barcode data were obtained from GenBank and Barcode of Life Data Systems (BOLD) and, together with our data, were analyzed using the neighbor-joining method with 1000 bootstrap replicates and the genetic distances were estimated using the Kimura-2-parameter. At the morphological level, the Brazilian population cannot be distinguished either from C. striatipennis or C. kiiensis, configuring a species complex but, at the molecular level our studied population is placed in a clade together with C. striatipennis, from South Korea. Bionomic characteristics of the Brazilian Chironomus population differ from the ones of C. kiiensis from Japan, the only species in this species complex with bionomic information available. The Brazilian Chironomus population has a smaller size, the double of the number of eggs and inhabits oligotrophic water, in artificial container. In the molecular analysis, populations of C. striatipennis and C. kiiensis are placed in a clade, formed by two groups: Group A (which includes populations from both named species, from different Asiatic regions and our Brazilian population) and Group B (with populations of C. kiiensis from Japan and South Korea). Genetic distance between the Brazilian population and specimens in Group A suggests that it was recently introduced in Brazil, and that its country of origin is probably South Korea.
Aquatic insects, non-native species, Amazonas, Chironomus kiiensis , Chironomus striatipennis , sibling species
Alien species represent one of the most serious threats to biodiversity at different taxonomic levels (
Despite their dominance in terms of diversity in most freshwater ecosystems, aquatic insects have a disproportionately low number of alien species when compared to other freshwater macroinvertebrates (
Among the necessary characteristics for a species to become a successful invasive alien are: phenotypic plasticity, ability for uniparental reproduction and fast growth in disturbed habitats (
During a study on aquatic insects in Amazonas state (Brazil), we collected specimens of Chironomidae that were similar, at the morphological level, to Chironomus kiiensis Tokunaga and, we have named it as such (
In view of this complex situation, our objectives were to register a Chironomus population of this Asiatic species complex in Brazil, to provide morphological information on this population, to investigate its identity using DNA barcoding and, to provide bionomic information about this species.
Egg masses of the Chironomus Brazilian population were collected in tap water accumulated in a 10 L plastic container, for several days (5th, 6th, 8th, 10th and 14th), in January 2011 in the urban area of Manaus municipality Amazonas, Brazil (03°06'50.17"S, 59°58'30.99"W). The egg masses were placed individually in 80 mL plastic vials, which were labeled with collection information, covered with a screen and observed daily until the larvae hatched and abandoned the gelatinous mass. Larvae from each egg batch were transferred to a plastic tray (19.5×31×6.5 cm) containing burned sand as substrate and 1.5 L of water (pH = 5.9; electrical conductivity of 20.7 µS cm-1). The trays were covered with wooden structures (40×21×32 cm) serving as frames for screens (2 mm mesh), following a model modified from
Larvae were fed fish food (TETRAMIM®) every 48 hours. The colony established using this collected material was kept in the insect-raising facility at the Coordenação de Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), at environmental conditions similar to those of the climate in Manaus during the months from May to September 2011: temperature of 26 ± 0.3 °C; air humidity of 75 ± 7.7% and photoperiod of 12/12 hours (data obtained from http://www.inmet.gov.br). The specimens analyzed in the present study were obtained from this colony.
Emerged adults with pupal and larval exuviae from the colony were dissected and mounted on slides with Euparal® following the procedures outlined by
Molecular analyses were done using the DNeasy Blood & Tissue (Qiagen) kit following the manufacturer’s recommendations. Amplifications of the extracted DNA from three specimens (2 larvae and 1 adult male) of the Brazilian Chironomus population were made using primers developed by
Sequences for 14 Chironomus species and Lipiniella fujiprimus (Sasa, 1985) available at the GenBank and Barcode of Life Data Systems (BOLD) were used in the analysis (accession numbers in Table
Voucher specimens of the Brazilian population are deposited in the Coleção de Invertebrados do Instituto Nacional de Pesquisas da Amazônia. Haplotype sequences are deposited in GenBank under the accession numbers KJ424334–KJ424336.
GenBank and BOLD accession numbers of the sequences from species of Chironomus and Lipiniella fujiprimus included in the analysis.
Species | Accession numbers | Reference |
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C. kiiensis |
JF412086–JF412089*; KC407765*; AB838642–AB838646*; JQ350720*; AB740240–AB740241* |
- |
C. striatipennis | COTW008-08, COTW011-08, COTW012-08, COTW027-10** | - |
C. balatonicus | JN016827* | - |
C. calligraphus |
KF278357*; COTW041-11–COTW042-11** |
- |
C. columbiensis | COTW001-08–COTW002-08** | - |
C. curabilis | JN016822* | - |
C. flaviplumus | JF412077* |
|
C. javanus | JF412085* |
|
C. nipponensis | JN887053* | - |
C. plumosus | JF412198* |
|
C. salinarius | KC250756* |
|
C. usenicus | JN016819* | - |
C. xanthus | DQ648209* | - |
L. fujiprimus | JF412078* |
|
The egg masses were characterized by their shape, length, width and number of eggs; the maximum length and width of eggs were measured. In order to determine the development time of the egg stage, five egg masses were isolated and observed every hour until first instar hatched.
Ten egg masses were isolated to determine the development time of each of the four larval instars; starting from the moment at which the first instar hatched, three larvae were fixed (in 80% ethanol) daily, until the last larva of the egg mass pupated. To identify the instar of each of the fixed larvae; they were mounted between slide and coverslip (using Hoyer as the mounting medium) to measure the ventral length of the head capsule, following the methodology of
To estimate pupal development time, 50 pupae were observed every 12 hours from the moment of pupation until adult emergence. Longevity of adults was estimated using 50 adults that emerged in the laboratory on the same day; these were isolated in pairs (male and female) in cages made of PET bottles and observed until there were no more survivors.
The morphology of the Brazilian Chironomus population (adult, pupal and larval) is identical to that presented in the original descriptions of C. striatipennis and of C. kiiensis (
Adult male and pupae. Chironomus striatipennis, Indian population. A Wing D Hypopygium, dorsal view G Anal spur, dorsal view. Chironomus kiiensis, Japanese population B Wing E Hypopygium, dorsal view H Anal spur, dorsal view. Chironomus striatipennis, Brazilian population C Wing F Hypopygium, dorsal view I Anal spur, dorsal view. Scale bar: 500 µm (A, B, C, G, H, I); 200 µm (D, E, F).
In the neighbor-joining tree (Fig.
NJ tree based on the COI sequences of the mtDNA of Chironomus (Diptera: Chironomidae) species. The sequence of Lipiniella fujiprimus was used as the outgroup. Bootstrap values > 50% are shown on branches. Accession numbers and countries are provided beside the species names. Species flagged with an asterisk (*) are neotropical species. Brazilian Chironomus population: C. sp1BRA; C. sp2BRA; C. sp3BRA
Chironomus species from other regions, including the three specimens from Brazil, were included in a distinct clade (Fig.
Genetic distance between Groups A and B and other Chironomus species based on the COI gene in the mtDNA. Values in bold in the first two lines indicate genetic distance within each group, and in the remaining lines bold values indicate intraspecific genetic distances. Analyses were conducted using Kimura-2-parameter model.
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | ||
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1. | Group A | 1.3 | ||||||||||||
2. | Group B | 9.6 | 1.3 | |||||||||||
3. | C. nipponensis | 17.0 | 15.6 | |||||||||||
4. | C. plumosus | 17.2 | 19.5 | 12.0 | ||||||||||
5. | C. flaviplumus | 14.4 | 13.3 | 13.5 | 17.9 | |||||||||
6. | C. javanus | 13.3 | 13.6 | 15.4 | 16.7 | 15.0 | ||||||||
7. | C. curabilis | 17.2 | 17.0 | 11.0 | 5.5 | 16.3 | 17.4 | |||||||
8. | C. usenicus | 16.5 | 17.5 | 10.5 | 3.1 | 16.8 | 17.2 | 4.0 | ||||||
9. | C. balatonicus | 18.2 | 17.2 | 12.0 | 8.8 | 16.1 | 16.5 | 8.4 | 8.2 | |||||
10. | C. salinarius | 17.9 | 15.7 | 15.4 | 18.7 | 15.1 | 18.3 | 16.4 | 17.0 | 18.4 | ||||
11. | C. calligraphus | 14.8 | 16.1 | 16.1 | 17.2 | 12.1 | 15.5 | 17.2 | 16.2 | 16.3 | 17.0 | 1.8 | ||
12. | C. columbiensis | 13.7 | 12.2 | 14.3 | 15.7 | 11.7 | 13.8 | 15.6 | 15.0 | 16.6 | 16.6 | 12.3 | 1.2 | |
13. | C. stigmateus | 16.9 | 15.6 | 16.1 | 18.6 | 16.2 | 15.3 | 17.0 | 17.6 | 19.6 | 15.7 | 17.5 | 15.7 | |
14. | C. xanthus | 10.5 | 10.6 | 10.1 | 5.9 | 13.8 | 9.4 | 7.4 | 6.7 | 6.5 | 12.3 | 9.7 | 10.5 | 13.8 |
Pairwise per cent nucleotide differences (p-distance) between all specimens based on the COI gene in the mtDNA. Analyses were conducted using the Kimura-2-parameter model. Values in bold are genetic distances between Groups A and B.
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | C. sp1BRA | |||||||||||||||||||
2. | C. sp2BRA | 0.0 | ||||||||||||||||||
3. | C. sp3BRA | 0.0 | 0.0 | |||||||||||||||||
4. | C. kiiensis_JF412086_South_Korea | 0.8 | 0.8 | 0.8 | ||||||||||||||||
5. | C. kiiensis_JF412087_South_Korea | 0.8 | 0.8 | 0.8 | 0.0 | |||||||||||||||
6. | C. kiiensis_JF412089_South_Korea | 0.8 | 0.8 | 0.8 | 0.0 | 0.0 | ||||||||||||||
7. | C. kiiensis_KC407765_South_Korea | 0.8 | 0.8 | 0.8 | 0.0 | 0.0 | 0.0 | |||||||||||||
8. | C. kiiensis_JF412088_South_Korea | 1.1 | 1.1 | 1.1 | 0.3 | 0.3 | 0.3 | 0.3 | ||||||||||||
9. | C. kiiensis_AB740241_Japan | 1.2 | 1.2 | 1.2 | 0.6 | 0.6 | 0.6 | 0.6 | 0.6 | |||||||||||
10. | C. kiiensis_AB838643_Japan | 1.7 | 1.7 | 1.7 | 0.9 | 0.9 | 0.9 | 0.9 | 1.2 | 1.5 | ||||||||||
11. | C. kiiensis_AB838645_Japan | 0.9 | 0.9 | 0.9 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.5 | 1.1 | |||||||||
12. | C. kiiensis_AB838646_Japan | 0.9 | 0.9 | 0.9 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 0.3 | 1.2 | 0.2 | ||||||||
13. | C. striatipennis_COTW008_Japan | 0.9 | 0.9 | 0.9 | 0.2 | 0.2 | 0.2 | 0.2 | 0.2 | 0.5 | 1.1 | 0.0 | 0.2 | |||||||
14. | C. striatipennis_COTW011_India | 3.0 | 3.0 | 3.0 | 2.5 | 2.5 | 2.5 | 2.5 | 2.8 | 3.1 | 3.3 | 2.6 | 2.8 | 2.6 | ||||||
15. | C. striatipennis_COTW012_India | 2.8 | 2.8 | 2.8 | 2.6 | 2.6 | 2.6 | 2.6 | 2.6 | 2.9 | 3.3 | 2.4 | 2.6 | 2.4 | 1.3 | |||||
16. | C. striatipennis_COTW027_Malaysia | 2.8 | 2.8 | 2.8 | 2.2 | 2.2 | 2.2 | 2.2 | 2.2 | 1.9 | 3.1 | 2.0 | 1.9 | 2.0 | 3.3 | 2.8 | ||||
17. | C. kiiensis_AB740240_Japan | 9.2 | 9.2 | 9.2 | 9.1 | 9.1 | 9.1 | 9.1 | 9.2 | 9.2 | 9.7 | 9.1 | 9.2 | 9.1 | 10.4 | 10.0 | 9.6 | |||
18. | C. kiiensis_AB838642_Japan | 9.1 | 9.1 | 9.1 | 9.2 | 9.2 | 9.2 | 9.2 | 9.4 | 9.4 | 9.9 | 9.2 | 9.4 | 9.2 | 10.3 | 9.8 | 9.9 | 0.6 | ||
19. | C. kiiensis_AB838644_Japan | 9.2 | 9.2 | 9.2 | 9.4 | 9.4 | 9.4 | 9.4 | 9.6 | 9.6 | 10.3 | 9.4 | 9.6 | 9.4 | 10.1 | 9.6 | 9.9 | 0.6 | 0.6 | |
20. | C. kiiensis_JQ350720_South_Korea | 10.1 | 10.1 | 10.1 | 10.1 | 10.1 | 10.1 | 10.1 | 10.3 | 9.9 | 11.2 | 10.1 | 9.9 | 10.1 | 11.1 | 10.7 | 10.3 | 1.9 | 2.2 | 2.0 |
Within Group A there are three specimens of C. striatipennis from Malaysia and India with a mean genetic divergence of 2.6%, a higher value considering that the mean divergence between the remaining group members was 0.6% (Table
Egg masses of the Brazilian Chironomus population were found attached by a stem in the wall of a plastic tray with water. The egg masses measured 16.6 mm (SD = 3.1; n = 5) in length and 1.59 mm (SD = 0.04; n = 5) in width (median region). Each mass contained an average of 600 eggs (SD = 104; n = 5). The eggs were elliptical in shape and measured, on average, 0.24 mm (SD = 0.02; n = 50) in length and 0.10 mm (SD = 0.01; n = 50) in width. The mean incubation time of the eggs was two days (SD = 0.5; n = 50) at 26 °C, with a hatching rate of 89.9%. The eggs were distributed in a pseudo-spiral pattern, in alternate parallel rows along the primary axis of the gelatinous mass (Fig.
The four instars of the Brazilian Chironomus population were well defined using the ventral length of the head capsule. Mean length of the head capsule of the 1st-instar is 54.7 µm (SD = 4.2; n = 81); the 2nd 93.7 µm (SD = 4.5; n = 53); the 3rd 157.1 µm (SD = 7.2; n = 67) and the 4th 257.6 µm (SD = 16.7; n = 316) (Fig.
Development times of the 1st (SD = 0.6; n = 81), 2nd (SD = 1.0; n = 53) and 3rd instars (SD = 1.1; n = 67) were similar, each averaging three days; the 4th instar was the longest, with mean development time of 10 days (SD = 2.5; n = 316). Mean time for complete larval stage development was 19 days (SD = 5.2; n = 517). Mean development time for the pupal stage, at 26 °C, was two days (SD = 0.24, n = 50). The life span of adults, on average, at 26 °C, was three days for both males (SD = 0.70, n = 50) and females (SD = 0.65, n = 50). Development time of the Brazilian Chironomus population from the time larvae hatch to the adult stage was 27 days at 26°C. The emergence percentage was 42.9% for females and 57.1% for males.
High morphological similarities observed between the Brazilian Chironomus population and both C. striatipennis and C. kiiensis (
Studies on the genetic intraspecific divergence in some Chironomidae genera have reported values between 0.5 and 2.3% (
The interspecific genetic divergence observed in our data is in accordance with results for other groups of Chironomidae and other aquatic Diptera families, with values around 15% (
The large genetic distance (mean 9%) between Group B specimens (composed of specimens identified as C. kiiensis from Japan and South Korea) and Group A is a clear indication that each clade represents a distinct species. This is also corroborated by the genetic distance observed between specimens in each species group (maximum = 3.3%), and by the interspecific genetic distance values reported by other studies. For example, a study on three Podonomus populations observed that the genetic distances between them were greater than 7%, indicating the presence of three species (
The placement of the Brazilian Chironomus population in Group A and its small genetic distance from South Korean specimens (0.8%) indicates that this might represents a recently introduced species in Brazil, probably, from a population from South Korea. This could have occurred due to the fact that Manaus is located in a port zone, receiving many cargo ships from different continents, including Asia, due to the presence of industries in the Manaus Tax-Free Zone (SUFRAMA). We therefore assume that specimens of the Brazilian Chironomus species arrived in Brazil by ship. Other exotic species have been entering the country by this way, perhaps using ballast water or some other source of standing water (e.g.
Environmental conditions where the Brazilian Chironomus population and the Japanese C. kiiensis population were collected were different: the Brazilian population was observed inhabiting oligotrophic water and the Japonese population eutrophic water (
The size of last-instar larvae, represented by the ventral length of the head capsule, of the Brazilian Chironomus population was smaller than that of the Japanese C. kiiensis population (Maeda and Yano 1998). Male survival time of the Brazilian Chironomus population under laboratory conditions was shorter (three days) than in the Japanese C. kiiensis population at similar air temperature (25 °C) (
In this study we addressed the taxonomic problem involving the species named C. striatipennis and C. kiiensis from Asia, since these names have been used for specimens morphologically similar and closely related. Regional variation among Asian populations of the two above mentioned species was observed, but only at molecular level, based on the genetic distance estimated using a partial COI sequence. We hypothesize that these two names encompass at least two, and perhaps three, species, based on sequences deposited in GenBank and BOLD. We indicated that the usual way to identify these two species, which are practically indistinguishable at the morphological level, based on geographical distribution is not a feasible approach, since specimens identified with the same name (C. kiiensis) from Japan and South Korea have highly genetic divergent (genetic distance of 9%). A detailed study, including the morphology of all life stages and a multilocus molecular analysis of populations from the entire distribution needs to be done to solve this taxonomic problem. The presence of an Asiatic Chironomus in Brazil might be the consequence of human globalization, where fast and easy global transportation systems are available to any organisms with the minimum characteristics of alien species. This example also demonstrates that the geographic limits of species cannot be considered in isolation, but rather need to be examined from a broad perspective to avoid mistakes.
Financial support was provided by PRONEX-CNPq/FAPEAM, INCT/ADAPTA, MCTI/INPA/PCI and a master’s scholarship provided by CAPES to the first author. We thank Dr. Jon Martin (University of Melbourne) and Dr. Masaru Yamamoto (Yamaguchi Prefecture) for sending specimens that allowed certification of species identities. Jeferson O. da Silva, Renato Tavares and Cláudio Monteiro Jr. helped in the fieldwork. We thank Natsumi H. Fearnside and Philip Fearnside for the English translation and revision. NH is a CNPq research fellow. VAS is a FAPEAM-CNPq DCR fellow. LMF was supported by a Visiting Expert Grant from the National Council for Scientific and Technological Development (PCI-CNPq/ MCTI/ INPA program).