Research Article |
Corresponding author: Natalia Kirichenko ( nkirichenko@yahoo.com ) Academic editor: Erik J. van Nieukerken
© 2019 Natalia Kirichenko, Paolo Triberti, Carlos Lopez Vaamonde.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Kirichenko N, Triberti P, Lopez-Vaamonde C (2019) New species of leaf-mining Phyllonorycter (Lepidoptera Gracillariidae) from Siberia feeding on Caragana (Fabaceae). ZooKeys 835: 17-41. https://doi.org/10.3897/zookeys.835.33166
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During a DNA barcoding campaign of leaf-mining Gracillariidae from the Asian part of Russia, a new species of Phyllonorycter Hübner, feeding on the Siberian pea shrub, Caragana arborescens Lam. (Fabaceae) was discovered in Siberia. Here, this taxon is described as Phyllonorycter ivani sp. n. Among Fabaceae-feeding Phyllonorycter, so far only P. caraganella (Ermolaev) has been known to develop on Caragana. Phyllonorycter ivani and P. caraganella show a large divergence in morphology (external and male genitalia) and barcode region of the mtDNA-COI gene (8.6%). They feed on different host plants species and have different ranges in Russia. We show that DNA barcode data weakly supports the Fabaceae-feeding species groups. In addition, we show that morphologically (strongly) and genetically (weakly), P. ivani has affinity to the haasi species group, a West Palearctic group with asymmetrical male genitalia.
Leaf-mining micromoths, legume, DNA barcoding, male genitalia morphology, Siberian peashrub
Siberia represents approximately 9% of Earth’s land surface, and its vast boreal forests contain a diverse insect fauna with Lepidoptera being particularly well represented, accounting over 5000 species (
In Siberia, leaf-mining micromoths and particularly the economically important family Gracillariidae have been the focus of recent studies, using DNA barcoding as a main tool to discover new species and host plant associations (
Legumes (Fabaceae) belonging to eight tribes (Desmodieae, Fabeae, Genisteae, Hedysareae, Loteae, Phaseoleae, Robinieae, and Trifolieae) (
The majority of the Palearctic Fabaceae-feeding Phyllonorycter (48 species, i.e., 84%) have asymmetrical male genitalia (Suppl. material
Among Fabaceae-feeding Phyllonorycter, P. caraganella (Ermolaev, 1986) is the only species known to feed on the legume genus Caragana (
During fieldwork in Central and Eastern Siberia, we collected two Phyllonorycter larvae mining leaves of the Siberian pea shrub, C. arborescens Lam. Analysis of the DNA barcodes of those two larvae revealed a large molecular divergence with DNA barcodes of P. caraganella. Further sampling and rearing and detailed morphological examination of adults confirmed the existence of a new Phyllonorycter species feeding on C. arborescens. Here we provide the description of this new species, Phyllonorycter ivani Kirichenko, Triberti & Lopez-Vaamonde sp. n. and expand the morphological description of P. caraganella from the Russian Far East. We also investigate whether DNA barcodes support the different Fabaceae-feeding Phyllonorycter species groups that have been based on the morphology of male genitalia.
Leaves with mines of P. ivani were collected in Central Siberia in Krasnoyarsk Krai (in the suburb of the city Krasnoyarsk, along the Yenisei river bank) and in Eastern Siberia in Transbaikal Krai (in the city Chita, Victory park) on C. arborescens from July to August 2014–2016 (Fig.
The study region in Russia. Sampling locations are indicated by yellow circles: Krasnoyarsk and Chita for Phyllonorycter ivani, Rakovka and Glukhovka for P. caraganella. Number of specimens is given for each sampled location: A adults, L larva. Regions: KK Krasnoyarsk Krai, TK Transbaikal (Zabaikalsky) Krai, PK Primorsky Krai. The Trans-Siberian railway (the total distance of 9288.2 km between Moscow to Vladivostok) is shown by red line.
In total, six larvae (two P. ivani and four P. caraganella) were preserved in 96% ethanol and 17 adult moths (nine P. ivani and eight P. caraganella) were reared from mines (Fig.
We examined the morphology of 17 dried and pinned specimens belonging to P. ivani (nine specimens) and P. caraganella (eight specimens). The adults of both species were photographed with Leica digital microscope DMS1000 and the incorporated digital camera and processed using the stacking system software Leica Application Suite LAS X. Genitalia were dissected from five P. ivani and four P. caraganella moths (Suppl. material
Genitalia dissection and slide mounting followed
SIF SB RAS Sukachev Institute of Forest, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia.
INRA Institut National de Recherche Agronomique, Orléans, France.
We DNA barcoded ten specimens of four Fabaceae-feeding Phyllonorycter species sampled in the Asian part of Russia: P. ivani (two larvae), P. caraganella (two adults and four larvae), P. medicaginella (Gerasimov, 1930) (one larva), and P. viciae (Kumata, 1963) (one larva) (Suppl. material
DNA was extracted from larvae and adults using NucleoSpin® tissue XS kit, Macherey-Nagel, Germany according to the manufacturer’s protocol. The COI barcode fragment (658 bp) was amplified via PCR using the primers LCO (5’ GGT CAA CAA ATC ATA AAG ATA TTG G 3’) and HCO (5’ TAA ACT TCA GGG TGA CCA AAA AAT CA 3’) following standard conditions for the reaction (
Barcode Index Numbers (BINs) were assigned by BOLD (
1 | At least a part of markings margined with dark scales | 2 |
– | Markings not margined with dark scales | 8 |
2 | White dorso-basal spot connected to basal streak | 3 |
– | White dorso-basal spot not connected to basal streak or absent | 4 |
3 | White dorso-basal spot elongate towards base | telinella |
– | White dorso-basal spot not elongate towards base | purgantella |
4 | First costal and dorsal strigulae connected at an obtuse angle | ivani* |
– | First costal and dorsal strigulae not connected and forming an acute angle | 5 |
5 | First and second costal strigulae connected or separated by a few black scales; left valva about 2× as wide as right one | scopariella |
– | First and second costal strigulae well separated; left valva about 6× as wide as right one | 6 |
6 | Apex of first dorsal opposite first costal strigula | 7 |
– | Apex of first dorsal opposite second costal strigula | tridentatae* |
7 | Four costal strigulae | haasi |
– | Five costal strigulae | balansae |
8 | Only two dorsal strigulae, the first forms a zig zag | deschkanus |
– | More than two dorsal strigulae | 9 |
9 | First costal and dorsal strigulae forming a slightly angled fascia, if interrupted, the two strigulae are only slightly inclined | estrela |
– | First costal and dorsal strigulae always separated and inclined at an acute angle | 10 |
10 | Subapical area without dark scales; saccus little differentiated from vinculum | baldensis |
– | Subapical area with suffusion of dark scales; saccus filiform, well distinct from the vinculum | floridae |
Forewing yellow ochre and white markings, with a basal streak, an angulated fascia in the median third and three costal and dorsal strigulae, all margined, often indistinctly, with darkish colour. Male genitalia asymmetric with a wide left valva, long spines apically and a thin right valva. Female genitalia with sterigma membranous and a large ostium bursae, signum consisting of an oval plate with two opposite spines in the centre.
The forewing pattern of P. ivani is similar to P. caraganella and P. viciae. It differs by the reduced or absent dark margins of all markings, a much angulated median fascia, an often present third strigula, and an indistinct apical spot, clearly defined in the other two species. In male genitalia, P. ivani is significantly different from P. caraganella by the asymmetrical valvae. For this character, P. ivani is similar to P. viciae but it is distinguishable for the just outlined saccus, which is very evident in P. viciae, a different curvature of the right valva and the sternum VIII rounded and not rectangular (
Holotype ♂ (Fig.
Adults of Phyllonorycter ivani sp. n. and P. caraganella A, B P. ivani (holotype, ♂) , Russia, Krasnoyarsk, Akademgorodok, the river Yenisei, left bank, “Krasiviy bereg”, ex. Caragana arborescens, 2.VII.2015, NK-69-15-6 (♂) , genitalia slide TRB4117♂ ; same location, date and host, NK-69-15-3 (♀), genitalia slide TRB4290♀ C P. caraganella, Russia, Primorsky Krai, Rakovka, ex. Caragana manshurica, 27.VII.2016, NK-184-16-8A (♀) , genitalia slide TRB4291♀. Scale bar: 1.2 mm.
6♂, 2♀ (Fig.
2 larvae. 1 larva, Russia, Transbaikal (Zabaikalsky) Krai, Chita, Viktory park, 52.03N, 113.50E, 75 m, 11.VIII.2015, C. arborescens, N Kirichenko leg., field ID: NK-261-15, sample ID NK510, process ID: MICRU065-15; 1 larva, Krasnoyarsk Krai, Krasnoyarsk, Akademgorodok, Yenisei river bank, “Krasiviy bereg”, 55.99N, 92.76E, 256 m, 15.VIII.2014, N Kirichenko leg., C. arborescens, filed ID: Kr-22, sample ID NK333, process ID: ISSIK282-14 (INRA).
The species name, ivani is derived from the first name of Natalia Kirichenko’s father, Ivan, who has continuously supported her interest in entomology.
Male and female. Alar expanse: 6.5–7 mm (Fig.
Head. Vertex rough, white, with mixture of ochreous piliform scales anteriorly; frons smooth, with broad, lustrous white scales. Antenna light ochre, length approximately 0.7× that of forewing, each flagellomere ringed with dark brown apically, scape and pedicel yellow white, the first sometimes spotted with dark brown above, pecten of a few piliform scales. Maxillary and labial palpi white, the first very reduced, about 1/5 of the labial palpi.
Thorax (Fig.
Abdomen. Sternum VIII of male shorter than right valve, with a round apex.
Male genitalia (Fig.
Male genitalia of Phyllonorycter ivani sp. n. Russia, Krasnoyarsk, Akademgorodok, the river Yenisei, left bank, “Krasiviy bereg”, ex. Caragana arborescens, 2.VII.2015 A holotype, NK-69-15-6 (♂) , genitalia slide TRB4117♂ , phallus removed B paratype, NK-69-15-1 (♂) , genitalia slide NK- 69- 15- 1♂ . Scale bar: 200 µm.
Female genitalia (Fig.
Female genitalia of Phyllonorycter ivani sp. n. Russia, Krasnoyarsk, Akademgorodok, the river Yenisei, left bank, “Krasiviy bereg”, ex. Caragana arborescens, 2.VII.2015, NK-69-15-3, genitalia slide TRB4290♀ A last segments of abdomen B signum C drawing of female genitalia based on the genitalia slide TRB4290♀ . Scale bar: 300 μm.
(Fig.
Biology of Phyllonorycter ivani sp. n., Caragana arborescens, Russia, Siberia A flat blotch mine (indicated by an arrow) on low side of the leaflet B–C tentiform mine with folded epidermis D the mine and leaf margin folded downward (an arrow) E opened mine with a larva (an arrow) inside F larva before pupation. A Transbaikal Krai, Chita, Viktory park, 11.VIII.2015 B–F Krasnoyarsk, the river Yenisei, left bank, “Krasiviy bereg”, 15.VIII.2014. Scale bars: 20 mm (A–B, D, F); 10 mm (C); 15 mm (E).
In Siberia, in 2014–2015, mines with late instar larvae were found in early July and with young larvae in August suggesting that the insect develops in two generations. The first generation (egg laying) likely starts in late May – beginning of June and lasts till middle of July (adult appearance), the second starts in mid-July and lasts till the end of August – early September. The overwintering stage of this species is unknown.
The host plant is Caragana arborescens (Fabaceae). So far, P. ivani has been found in suburban areas. Indeed, the type locality is on the outskirts of Krasnoyarsk (Krasnoyarsk Krai, Russia) where the bushes of its host plant are planted as an ornamental fence along the promenade on the left river bank of the river Yenisei. In Chita (Transbaikal Krai), the mines were found on bushes of C. arborescens in the city park.
Russia: Central Siberia (Krasnoyarsk Krai, Krasnoyarsk), Eastern Siberia (Transbaikal Krai, Chita). In 2014–2017, no mines of P. ivani were found on Caragana spp. in other regions of Siberia: Tyumen, Omsk, Novosibirsk Oblasts, Khanty-Mansi Autonomous Okrug, Tomsk, Kemerovo, Irkutsk Oblasts, Altai Krai, the Republics of Tuva and Buryatia, neither in the Russian Far East (Amur Oblast, Sakhalin Island). However, it is highly likely that the species occurs in Eastern Siberia, on the territory between Krasnoyarsk and Transbaikal Krais.
Forewing bright yellow ochre, with a basal streak, a not angulated fascia in the median third and three costal and two dorsal strigulae, all markings clearly margined with dark colour. Male genitalia symmetrical with long thin valvae. Female genitalia with a rounded margin of sternum VII, signum consisting of an oval plate with two opposite spines not aligned horizontally.
Because of the symmetrical male genitalia, P. caraganella is close to P. fabaceaella (Kuznetzov, 1978) and P. kuznetzovi Ermolaev (Suppl. material
6♂, 2♀ 4 larvae (Figs
Male and female. Alar expanse: 6.5–7.2 mm (Figs
Head. As in the previous species, dark scales on scape are not present.
Thorax (Fig.
Abdomen. Sternum VIII rectangular, shorter than valva.
Male genitalia (Fig.
Female genitalia (Fig.
(Fig.
Biology of Phyllonorycter caraganella (Ermolaev, 1986) on Caragana manshurica, Russian Far East, Primorsky Krai, 27.VII.2016 A sampling plot B young epidermal tunnel mines on low side of the leaflet (indicated by the arrows) C–D flat blotch mine with the preceding epidermal tunnel (arrow) E tentiform mine with leaf margin folded downwards and with whitish “windows” – the regions of eaten out palisade parenchyma in the mine (arrows) F same mine (see E) from lower side of the leaflet, with pupal exuvium protruding the mine (arrow). Scale bar: 20 mm.
Two generations. In Russian Far East, vacated tentiform mines of the first generation and young mines (epidermial tunnels) of the second generation were found in the end of July 2016. It is unknown how the species hibernates.
(Fig.
Russia, Russian Far East: Khasansky District (Barabash) (
The holotype (♂) and paratypes (4♂ and 7♀) that, according to
We obtained barcode data for 53 Fabaceae-feeding Phyllonorycter specimens belonging to 44 BINs and 39 species (Suppl. material
A Maximum Likelihood COI tree of the Fabaceae-feeding Phyllonorycter generated with the K2P nucleotide substitution model. Each specimen is identified by its Process ID code (see Table S2) and Barcode Index Number (BIN). Branch lengths are proportional to the number of substitutions per site. The percentage of trees in which the associated taxa clustered together is shown next to the branches, with the bootstrap values >70. Species indicated by red arrow highly similar to haasi group morphologically (male genitalia), but not genetically. *P. cerasinella has symmetrical male genitalia, **P. insignitella asymmetrical (
The nearest neighbours of the new species P. ivani were both P. purgantella (Chrétien, 1910) and P. scopariella (Zeller, 1846) from the haasi group (asymmetrical male genitalia) with 6.3% divergence, followed by P. medicaginella (symmetrical male genitalia clade) with 6.4% divergence (Table
Intra- and interspecific genetic divergences in DNA barcode fragments (COI mtDNA) between Phyllonorycter ivani sp. n. and the close neighbours – Phyllonorycter spp. with the asymmetrical male genitalia from haasi group (see Nr. 2, 3, 5, 7-12, 14) and Phyllonorycter spp. with the symmetrical male genitalia (4, 6, 13)*.
№ | Species | P. ivani sp. n. | P. purgantella | P. scopariella | P. medicaginella | P. nevadensis | P. insignitella | P. estrela | P. deschkanus | P. haasi | P. telinella | P. floridae | P. baldensis | P. caraganella | P. tridentatae |
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | ||
1 | P. ivani sp. n. | [0] | |||||||||||||
2 | P. purgantella (Chrétien, 1910) | 6.3 | [−] | ||||||||||||
3 | P. scopariella (Zeller, 1846) | 6.3 | 1.5 | [−] | |||||||||||
4 | P. medicaginella (Gerasimov, 1930) | 6.4 | 7.4 | 7.4 | [−] | ||||||||||
5 | P. nevadensis (Walsingham, 1908) | 6.5 | 6.0 | 5.9 | 7.4 | [−] | |||||||||
6 | P. insignitella (Zeller, 1846) | 7.1 | 8.9 | 8.8 | 7.7 | 9.3 | [−] | ||||||||
7 | P. estrela Laštůvka & Laštůvka, 2006 | 7.2 | 4.3 | 4.4 | 8.7 | 6.5 | 9.6 | [3.1] | |||||||
8 | P. deschkanus Laštůvka & Laštůvka, 2006 | 7.7 | 5.2 | 4.7 | 8.0 | 7.2 | 8.6 | 4.7 | [−] | ||||||
9 | P. haasi (Rebel, 1901) | 7.9 | 5.4 | 5.6 | 9.1 | 6.7 | 9.7 | 2.3 | 5.6 | [−] | |||||
10 | P. telinella Laštůvka & Laštůvka, 2006 | 8.0 | 6.5 | 6.5 | 8.2 | 6.9 | 10.2 | 6.0 | 6.4 | 6.7 | [−] | ||||
11 | P. floridae Laštůvka & Laštůvka, 2006 | 8.2 | 5.7 | 5.7 | 8.4 | 7.4 | 9.4 | 5.4 | 5.1 | 6.3 | 7.0 | [−] | |||
12 | P. baldensis Laštůvka & Laštůvka, 2006 | 8.2 | 5.2 | 5.6 | 8.7 | 7.7 | 10.0 | 6.1 | 5.6 | 7.0 | 7.7 | 3.5 | [−] | ||
13 | P. caraganella (Ermolaev, 1986) | 8.6 | 8.6 | 8.5 | 8.7 | 9.1 | 8.8 | 10.2 | 8.7 | 10.4 | 9.2 | 8.5 | 9.5 | [0−1] | |
14 | P. tridentatae Laštůvka & Laštůvka, 2006 | 8.7 | 7.9 | 8.1 | 8.9 | 8.9 | 10.0 | 8.6 | 8.1 | 10.0 | 8.4 | 8.2 | 9.3 | 10.1 | [−] |
The new species, P. ivani is the second Phyllonorycter species described from Caragana (Fabaceae). This species is clearly distinguishable from the other Caragana-feeding species, P. caraganella by external morphology (forewing pattern) and highly different male genitalia, i.e., asymmetric in P. ivani and symmetrical in P. caraganella. High genetic divergence found between these two gracillariid species, suggests that the plant genus Caragana has been colonized at least twice independently in the Eastern Palearctic.
Despite extensive field surveys in the Asian part of Russia, the new species has so far been detected only in two locations in Central and Eastern Siberia, whereas P. caraganella has been found exclusively in the southern territory of the Russian Far East. Both species are monophagous, feeding exclusively on C. arborescens (P. ivani) and C. manshurica (P. caraganella) respectively. The natural ranges of these plants do not overlap: C. arborescens occurs in the forest and forest-steppe zones in Siberia, China, Mongolia, and Kazakhstan, whereas C. manshurica grows in the Russian Far East, northeast China, and Korea (
The genus Caragana has 96 described species (
DNA barcode data weakly support the different Fabaceae-feeding species groups, but data on more loci are needed to infer the phylogenetic interrelationships of those groups and the evolution of asymmetric genitalia (
By its asymmetric male genitalia and specific valval structures, P. ivani is similar to the haasi group. According to their DNA barcodes, two species of the haasi group, P. purgantella and P. scopariella are the nearest neighbours of P. ivani (Fig.
We thank Svetlana V Gorokhova (Russia) for organizing the field work in the Russian Far East, Svetlana V Baryshnikova (Russia) for checking the collection of the Zoological Institute, Russian Academy of Science for the presence of P. caraganella from its type location and for the fruitful discussions, Erik J van Nieukerken (The Netherlands), Aleš Laštůvka, Zdeněk Laštůvka (Czech Republic), Alain Cama (France), and Gerfried Deschka (Austria) for sharing specimens and/or DNA barcodes of some Fabaceae-feeding Phyllonorycter with us, Irina A Mikhailova (Russia) for the map construction, Vyacheslav I Zyryanov (Russia) for consultations on Photoshop, and Yuri N Baranchikov (Russia) for his support at different stages of the study. Special thanks to Erik J van Nieukerken, Camiel Doorenweerd (Hawaii, USA) and Zdeněk Laštůvka for insightful comments and revision of the manuscript. NK was supported by the Russian Foundation for Basic Research (project No. 15-29-02645), LE STUDIUM® fellowship program, Institute for advanced studies – Loire Valley (Orléans, France) and the French Embassy in Russia, Bourse Metchnikov (grant No. 908981L, Campus France), and the EU program COST Action FP1401 “Global Warning: A Global Network of Nurseries as Early Warning System against Alien Tree Pests”.
Table S1
Explanation note: Fabaceae-feeding Phyllonorycter of the world.
Table S2
Explanation note: Fabaceae-feeding Phyllonorycter species involved in the study. Where relevent, genitalia preparation number is given in square brackets in the Life stage column. Both the Process ID and Sample ID codes link the record in the BOLD database and the voucher specimen from which the sequence is derived.