Data Paper |
Corresponding author: Maria Pitta Groz ( avg.museu@marinha.pt ) Corresponding author: Paula Leandro ( paula.leandro@marinha.pt ) Academic editor: Maria Elina Bichuette
© 2018 Ana Serra Silva, Maria Pitta Groz, Paula Leandro, Carlos A. Assis, Rui Figueira.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Silva AS, Pitta Groz M, Leandro P, Assis CA, Figueira R (2018) Ichthyological collection of the Museu Oceanográfico D. Carlos I. ZooKeys 752: 137-148. https://doi.org/10.3897/zookeys.752.20086
Resource citation:
Silva AS, Pitta Groz M, Leandro P, Assis CA, Figueira R (2017) Ichthyological collection of the Museu Oceanográfico D. Carlos I. 675 records, published online, http://ipt.gbif.pt/ipt/resource?r=codc&v=1.0, released on 18 May 2017. GBIF Key of collection: https://gbif.org/dataset/6005f3b4-da6a-4d88-ac92-81f2e950eb24, Data Paper https://doi.org/10.3897/zookeys.752.20086
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The collection of the Museu Oceanográfico D. Carlos I is a historical specimen, instrument, and document collection that has been housed at the Aquário Vasco da Gama since 1935. The collection is largely the result of several scientific campaigns conducted by Dom Carlos de Bragança between 1896 and 1907. Specifically, the ichthyological collection consists of 675 surviving catalogue records of specimens caught, acquired or offered to D. Carlos I between 1892 to 1907, and includes the type specimen for Odontaspis nasutus Bragança, 1904 (junior synonym of Mitsukurina owstoni Jordan, 1898), along with several specimens of deep sea species. All specimens were captured in coastal Portuguese waters, and were preserved in alcohol, formalin, or mounted.
Natural History collection, D. Carlos I, Animalia , Myxini , Petromyzonti , Elasmobranchii , Holocephali , Actinopterygii , Occurrence, Portugal
Dom Carlos I, king of Portugal and the father of Portuguese oceanography (
The writings of D. Carlos I include eleven detailed annual reports of his oceanographic campaigns (
In his reports, D. Carlos I described, in great detail, the programme and objectives of each campaign, the sampling stations and materials used in each, their depth and benthic characteristics, and listed the specimens collected (
The collection of the Museu Oceanográfico D. Carlos I has been housed at the Aquário Vasco da Gama (AVG) since 1935, but it comprises only a small fraction of the material collected by D. Carlos, as many specimens were lost between the king’s assassination, in 1908, and the collection’s transfer to the AVG (
The wider collection of the Museu Oceanográfico D. Carlos I is made up of ichthyological, mammalian, ornithological, reptilian and a wide variety of invertebrate specimens, along with scientific instruments, and a rich scientific library that includes the king’s manuscripts and copies of his published works. This collection is of incalculable historical and scientific value as it is one of the few surviving royal Natural History collections in Portugal, most of which were destroyed in a fire at the Museu Bocage in 1978 (
Given the historical value of the collection and its wide faunal assemblage, a dataset of the ichthyological specimens housed at the Museu Oceanográfico D. Carlos I was made available on the Global Biodiversity Information Facility (GBIF) data portal. This dataset established the first records of at least 184 species in Portuguese waters as far back as the period between 1892 and 1907.
The objectives of the present paper are: (1) to present the existence and the composition of the ichthyological collection of the Museu Oceanográfico D. Carlos I, which comprises 675 records, captured between 1892 and 1907; and (2) to emphasise its importance, not only because of its historical value, but also due to its diversity and the rarity of some of the specimens within it. We also provide the historical context, and a summary catalogue of the taxa in the collection, and highlight some notable specimens.
The dataset is comprised of the ichthyological specimens from the collection of the Museu Oceanográfico D. Carlos I. These specimens consist of 675 catalogued records, composed of 5 classes, 35 orders, 119 families, 196 genera, and 236 species. There are between 590 and 600 specimens preserved in alcohol and formalin, and between 75 and 90 mounted specimens, collected between 1892 and 1907. Many specimens have accompanying collection data in the king’s manuscripts. The records include the holotype of Odontaspis nasutus Bragança, 1904 (junior synonym of Mitsukurina owstoni Jordan, 1898), an exquisitely preserved Nemichthys scolopaceus Richardson, 1848, and a mounted specimen of Centrophorus lusitanicus Barbosa du Bocage & de Brito Capello, 1864.
Project title: Revisão Taxonómica e Consolidação dos Catálogos das Coleções Ictiológicas do Aquário Vasco da Gama
Funding: No funding was required or used for this study.
General taxonomic coverage description: The collection comprises representatives of the classes Myxini, Petromyzonti, Elasmobranchii, Holocephali and Actinopterygii, with actinopterygians representing over 80% of all specimens (Figure
Kingdom: Animalia
Phylum: Chordata
Class: Actinopterygii, Elasmobranchii, Holocephali, Myxini, Petromyzonti
Order: Anguilliformes, Atheriniformes, Aulopiformes, Batrachoidiformes, Beloniformes, Beryciformes, Carcharhiniformes, Chimaeriformes, Clupeiformes, Gadiformes, Gobiesociformes, Hexanchiformes, Lamniformes, Lampriformes, Lophiiformes, Myctophiformes, Myliobatiformes, Myxiniformes, Notacanthiformes, Ophidiiformes, Osmeriformes, Perciformes, Petromyzontiformes, Pleuronectiformes, Rajiformes, Saccopharyngiformes, Scorpaeniformes, Squaliformes, Squatiniformes, Stephanoberyciformes, Stomiiformes, Syngnathiformes, Tetraodontiformes, Torpediniformes, Zeiformes
Family: Alepisauridae, Alepocephalidae, Alopiidae, Ammodytidae, Anguillidae, Antennariidae, Argentinidae, Atherinidae, Aulopidae, Balistidae, Batrachoididae, Belonidae, Berycidae, Blenniidae, Bothidae, Bramidae, Callionymidae, Caproidae, Carangidae, Carapidae, Carcharhinidae, Caristiidae, Centracanthidae, Centriscidae, Centrolophidae, Centrophoridae, Cepolidae, Cetorhinidae, Chaunacidae, Chiasmodontidae, Chimaeridae, Chlamydoselachidae, Citharidae, Clinidae, Clupeidae, Congridae, Cottidae, Cynoglossidae, Dalatiidae, Diodontidae, Echeneidae, Echinorhinidae, Epigonidae, Etmopteridae, Gadidae, Gempylidae, Gobiesocidae, Gobiidae, Gonostomatidae, Haemulidae, Hexanchidae, Himantolophidae, Labridae, Lamnidae, Lampridae, Lophiidae, Lotidae, Macrouridae, Melamphaidae, Merlucciidae, Mitsukurinidae, Molidae, Moridae, Moronidae, Mugilidae, Mullidae, Muraenidae, Myctophidae, Myliobatidae, Myxinidae, Nemichthyidae, Nomeidae, Notacanthidae, Ophichthidae, Ophidiidae, Oxynotidae, Peristediidae, Petromyzontidae, Phycidae, Polyprionidae, Pomacanthidae, Pomacentridae, Pomatomidae, Pseudotriakidae, Rajidae, Regalecidae, Rhinobatidae, Saccopharyngidae, Sciaenidae, Scomberesocidae, Scombridae, Scophthalmidae, Scorpaenidae, Scyliorhinidae, Sebastidae, Serranidae, Soleidae, Somniosidae, Sparidae, Sphyraenidae, Sphyrnidae, Squalidae, Squatinidae, Sternoptychidae, Stomiidae, Stromateidae, Synaphobranchidae, Syngnathidae, Tetraodontidae, Torpedinidae, Trachichthyidae, Trachinidae, Trachipteridae, Triakidae, Trichiuridae, Triglidae, Uranoscopidae, Xiphiidae, Zeidae
General spatial coverage: The bulk of the specimens were collected at the mouth of the rivers Tagus and Sado, and in the bays of Cascais and Sesimbra, usually within 50 nautical miles of the coast. The collection also features several specimens caught on the Algarve coast, a handful of specimens from the coast north of the Cabo da Roca, and one specimen tentatively identified as being from the Azores. The sampling depths range from surface level to 1875 m deep. Most specimens were captured within the polygon defined by the following coordinates: 36°42'14"N and 42°17'38"N latitude; 10°43'22"W and 6°11'45"W longitude (Figure
July 18, 1892–June 8, 1907
Collection name: Coleção do Museu Oceanográfico D. Carlos I
Collection identifier: bf52e001-eb74-421e-9d51-157d6eb5a358
Specimen preservation method: Alcohol, Formalin, Mounted
Curatorial unit: Between 590 and 600 jars, between 60 and 70 mounted specimens, and 16 jaws
Method step description: The ichthyological collection of the Museu Oceanográfico D. Carlos I was first catalogued for publication by
The first step of the current revision project was to isolate ichthyological records from the electronic catalogue, and check them for synonymy using both FishBase (
Once catalogue crosschecking was complete, specimen labels were compared to the final electronic catalogue, both to confirm the information and to check the location of the specimens. The crosschecking process also identified two mislabelled elasmobranch specimens, which were identified using Compagno’s Sharks of the World (1984). When mismatches were found, the information in the catalogue was substituted with the information from the specimen labels, including species names.
The last step in the creation of the electronic catalogue was to resolve naming inconsistencies. First, the species identification present on labels was checked for synonymy. Once valid names had been identified, the species range for each valid taxon was ascertained using FishBase (
For publication purposes, the records pertaining to the collection of the Museu Oceanográfico D. Carlos I were extracted from the electronic catalogue and transformed into a DarwinCore compatible Excel (Microsoft, Washington, 2016) spread sheet. The dataset was enriched with collection data taken from the king’s records of his oceanographic campaigns (
Study extent description: The specimens belonging to D. Carlos’s ichthyological collection can be divided in three non-taxonomical groups: specimens caught during the king’s oceanographic campaigns, specimens caught by the king outside the campaigns, and those offered to the king. These groups vary in collection data completeness, with the specimens captured during oceanographic campaigns generally having the most information, including navigational bearings and collection depths, and those offered to D. Carlos having the least information attached to them, some have only the collection locality or purchase location. However, all specimens were captured in Portuguese coastal waters, and those caught by the king were captured mostly in the area between the Cabo da Roca and Setúbal, and some in the Algarve. The specimens were captured year-round, between 1892 and 1907, but the oceanographic campaigns were usually held in the spring and summer months, from 1896 to 1907.
Sampling description: The specimens were caught using a variety of fishing nets, lines and traps (côvo). The line fishing methods included longline fishing (espinhel) and angling. The fishing nets used range from bottom and midwater trawls to dragnets. Traditional fishing techniques may also have been used, as some specimens were bought in markets or offered by fishermen, but there is no specific additional information in these cases. Nonetheless, there is record of at least one specimen being harpooned.
Quality control description: The validity of species’ names was checked using both FishBase (
Object name: Darwin Core Archive Ichthyological Collection of the Museu Oceanográfico do Rei D. Carlos I
Character encoding: UTF-8
Format name: Darwin Core Archive format
Format version: 1.0
Distribution: http://ipt.gbif.pt/ipt/archive.do?r=codc
Publication date of data: 2017-05-22
Language: Portuguese
Licences of use: Creative Commons Attribution (CC-BY) 4.0 License
Metadata language: English
Date of metadata creation: 2017-04-11
Hierarchy level: Dataset
We would like to thank Paula Sousa from the Aquário Vasco da Gama for helping with the specimens’ label verification and location. We also thank Patrick Reis Santos, from MARE - Marine and Environmental Sciences Centre, Faculdade de Ciências, Universidade de Lisboa, Portugal and School of Biological Sciences, University of Adelaide, Australia, and Nathan Kenny, from the Natural History Museum, London, United Kingdom, for proof-reading our manuscript. Lastly, we would like to thank André Esguícero, whose comments contributed to the improvement of the manuscript originally submitted.