The US Virtual Herbarium: working with individual herbaria to build a national resource

Mary Barkworth; Zack Murrell

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Gil Nelson, Patrick Sweeney, Lisa E. Wallace, Richard K. Rabeler, Dorothy Allard, Herrick Brown, J. Richard Carter, Michael W. Denslow, Elizabeth R. Ellwood, Charlotte C. Germain‐Aubrey, Ed Gilbert, Emily Gillespie, Leslie R. Goertzen, Ben Legler, D. Blaine Marchant, Travis D. Marsico, Ashley B. Morris, Zack Murrell, Mare Nazaire, Chris Neefus, Shanna Oberreiter, Deborah Paul, Brad R. Ruhfel, Thomas Sasek, Joey Shaw, Pamela S. Soltis, Kimberly Watson, Andrea Weeks, Austin R. Mast (2015)
Digitization workflows for flat sheets and packets of plants, algae, and fungi. Applications in Plant Sciences 3: .

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Ho Lam Wang, Tin Hang Wong, Yiu Man Chan, Yat Sum Cheng, David Tai Wai Lau, Antonio Agudo (2022)
Photogrammetric reconstruction of 3D carpological collection in high resolution for plants authentication and species discovery. PLOS ONE 17: e0270199.

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Michael Balke, Stefan Schmidt, Axel Hausmann, Emmanuel FA Toussaint, Johannes Bergsten, Matthew Buffington, Christoph L Häuser, Alexander Kroupa, Gregor Hagedorn, Alexander Riedel, Andrew Polaszek, Rosichon Ubaidillah, Lars Krogmann, Andreas Zwick, Martin Fikáček, Jiří Hájek, Mariano C Michat, Christopher Dietrich, John La Salle, Beth Mantle, Peter KL Ng, Donald Hobern (2013)
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Vincent Smith, Vladimir Blagoderov (2012)
Bringing collections out of the dark. ZooKeys 209: 1.

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Caleb Powell, Joey Shaw (2021)
Performant barcode decoding for herbarium specimen images using vector‐assisted region proposals (VARP). Applications in Plant Sciences 9: .

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Luiza Teixeira‐Costa, J. Mason Heberling, Carol A. Wilson, Charles C. Davis (2023)
Parasitic flowering plant collections embody the extended specimen. Methods in Ecology and Evolution 14: 319.

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Diana L. Soteropoulos, Travis D. Marsico (2022)
Community Science Success for Herbarium Transcription in Arkansas: Building a Network of Students and Volunteers for Notes from Nature. Castanea 87: .

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Jun Wen, Stefanie M. Ickert‐Bond, Marc S. Appelhans, Laurence J. Dorr, Vicki A. Funk (2015)
Collections‐based systematics: Opportunities and outlook for 2050. Journal of Systematics and Evolution 53: 477.

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Yoon-Su KIM, Sang-Hun OH (2022)
Morphometric analysis of the Daphne kiusiana complex (Thymelaeaceae) using digitized herbarium specimens. Korean Journal of Plant Taxonomy 52: 144.

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Karen Thompson, Joanne Birch (2023)
Mapping the Digitisation Workflow in a University Herbarium. Research Ideas and Outcomes 9: .

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Anna K. Monfils, Karen E. Powers, Christopher J. Marshall, Christopher T. Martine, James F. Smith, L. Alan Prather (2017)
Natural History Collections: Teaching about Biodiversity Across Time, Space, and Digital Platforms. Southeastern Naturalist 16: 47.

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Giulia Albani Rocchetti, Chelsey Geralda Armstrong, Thomas Abeli, Simone Orsenigo, Caroline Jasper, Simon Joly, Anne Bruneau, Maria Zytaruk, Jana C. Vamosi (2021)
Reversing extinction trends: new uses of (old) herbarium specimens to accelerate conservation action on threatened species. New Phytologist 230: 433.

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Eric Schuettpelz, Paul Frandsen, Rebecca Dikow, Abel Brown, Sylvia Orli, Melinda Peters, Adam Metallo, Vicki Funk, Laurence Dorr (2017)
Applications of deep convolutional neural networks to digitized natural history collections. Biodiversity Data Journal 5: e21139.

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Patrick W. Sweeney, Binil Starly, Paul J. Morris, Yiming Xu, Aimee Jones, Sridhar Radhakrishnan, Christopher J. Grassa, Charles C. Davis (2018)
Large–scale digitization of herbarium specimens: Development and usage of an automated, high–throughput conveyor system. TAXON 67: 165.

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Alper Tunga Akın, Saliha Ünver, Kamber Can Alkiş (2024)
Cloud database supported virtual herbarium application. Digital Library Perspectives 40: 359.

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Travis D. Marsico, Erica R. Krimmel, J. Richard Carter, Emily L. Gillespie, Phillip D. Lowe, Ross McCauley, Ashley B. Morris, Gil Nelson, Michelle Smith, Diana L. Soteropoulos, Anna K. Monfils (2020)
Small herbaria contribute unique biogeographic records to county, locality, and temporal scales. American Journal of Botany 107: 1577.

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Clayton W. Hale, Joshua J. Granger, Alison K. Paulson, Carlos Ramirez-Reyes, Qin Ma, Jia Yang (2022)
Modeling Habitat Suitability for Stewartia ovata Across the Southeastern United States. Castanea 86: .

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André Luís de Gasper, Gustavo Heiden, Leonardo M. Versieux, Paula M. Leitman, Rafaela C. Forzza (2021)
Challenges and lessons learned from digitizing small Brazilian herbaria. Acta Botanica Brasilica 35: 689.

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Kari M. Harris, Travis D. Marsico (2017)
Digitizing specimens in a small herbarium: A viable workflow for collections working with limited resources. Applications in Plant Sciences 5: .

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Alexander Tianara, Bhisma Gusti Anugra, Wisnu Wardhana (2023)
Gastropod collection in biota collection room Universitas Indonesia (Ruang Koleksi Biota UI/RKBUI): From University’s collection to a greater impact collection. INTERNATIONAL CONFERENCE ON APPLIED COMPUTATIONAL INTELLIGENCE AND ANALYTICS (ACIA-2022) 2705: 020003.

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Rebekah D. Wallace, Charles T. Bargeron, Joseph H. LaForest, Rachel L. Carroll (2021)
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