A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortís Highlands of Mesoamerica

Abstract A new species of palm-pitviper of the genus Bothriechis is described from Refugio de Vida Silvestre Texíguat in northern Honduras. The new species differs from congeners by having 19 dorsal scale rows at midbody, a bright green dorsal coloration in adults, the prelacunal scale fused to the second supralabial, and in representing a northern lineage that is sister to Bothriechis lateralis, which is distributed in Costa Rica and western Panama and is isolated from the new taxon by the Nicaraguan Depression. This represents the 15th endemic species occurring in Refugio de Vida Silvestre Texíguat, one of the richest herpetofaunal sites in Honduras, itself being the country with the highest degree of herpetofaunal endemism in Central America. We name this new species in honor of a Honduran conservationist slain in fighting against illegal logging, highlighting the sacrifices of rural activists in battling these issues and the critical importance of conservation in these areas.

sites in Honduras, itself being the country with the highest degree of herpetofaunal endemism in Central America. We name this new species in honor of a Honduran conservationist slain in fighting against illegal logging, highlighting the sacrifices of rural activists in battling these issues and the critical importance of conservation in these areas.
The green palm-pitvipers (genus Bothriechis) of Mesoamerica have long been a source of taxonomic uncertainty and confusion (Campbell and Lamar 2004). Ambiguities among type specimens and localities, the imprecise provenance of many available specimens, disjunct distributions limited to fragmented highland forests, and misleading external morphology have all contributed to a lack of taxonomic resolution among populations currently assigned to two species from the Chortís Highlands; Bothriechis marchi (Barbour and Loveridge 1929) and B. thalassinus. As currently understood, these two taxa inhabit a number of disjunct localities in the Chortís Highlands Lamar 2004, McCranie 2011a). Available molecular data for these two taxa are limited to a single sample assigned to each nominal form, which indicate the two are sister species nested within a Nuclear Central American clade (also including B. aurifer, B. bicolor, and B. rowleyi) that is, in turn, sister to the highland Bothriechis (i.e. B. lateralis and B. nigroviridis) found in lower Central America (Taggart et al. 2001, Castoe and Parkinson 2006, Castoe et al. 2009).
Bothriechis marchi sensu lato is known from localities in the Cordillera Nombre de Dios, Cordillera de Merendón, and Sierra de Sulaco of Honduras and adjacent areas of Guatemala, with B. thalassinus being found in the Cordillera de Merendón of Guatemala and Honduras, Cerro Santa Bárbara and nearby highland forests in Honduras, Cerro del Mono in eastern Guatemala, and the highlands around the El Salvador-Guatemala-Honduras border area (Campbell and Lamar 2004;McCranie 2011a). Both of these taxa include a number of allopatric highland populations that have not been assessed using phylogenetic methods. Of interest here are populations from the Cordillera Nombre de Dios, found within and around Refugio de Vida Silvestre Texíguat and Parque Nacional Pico Bonito. These two cloud forest reserves are each recognized for their diverse endemic herpetofauna (McCranie and Castañeda 2005;Townsend et al. 2012) and are taxonomically and biogeographically distinctive from that of the northern Cordillera de Merendón, which includes the vicinity of the type locality of B. marchi in the Sierra de Omoa (Townsend and Wilson 2008).
Two expeditions in 2010 provided the first herpetofaunal inventory of the extensively forested windward portions of Refugio de Vida Silvestre Texíguat, one of the most endemism-rich highland forests in Mesoamerica . During two visits to the windward side of Refugio de Vida Silvestre Texíguat in June and July 2010, we collected a series of arboreal pitvipers representative of those assigned to B. marchi. Phylogenetic analyses revealed that the population from Refugio de Vida Silvestre Texíguat is not conspecific with the nominal taxon B. marchi, nor are they part of the Nuclear Central American clade containing B. marchi and B. thalassinus. Remarkably, this population is shown to represent a relict northern lineage that is most closely related to B. lateralis from Costa Rica and western Panama. We herein describe the Refugio de Vida Silvestre Texíguat population of Bothriechis as a new taxon, and discuss the implications for systematics, biogeography, and conservation.

Field-based sampling
The type series was collected during sampling in the vicinity of La Liberación (15.53°N, 87.29°W; camp established at 1,030 m elevation) during 10-21 June (11 participants; 1,320 person-hours sampling) and 26 July-2 August 2010 (13 participants; 880 person hours). Tissue samples were preserved in SED buffer (20% DMSO, 0.25 M EDTA, pH 7.5, NaCl saturated; Seutin et al. 1991, Williams 2007 and whole specimens in 10% formalin and later transferred to 70% ethanol. Specimens were deposited in the Carnegie Museum of Natural History (CM), Museum of Vertebrate Zoology, University of California Berkeley (MVZ), National Museum of Natural History, Smithsonian Institution (USNM), and Amphibian and Reptile Diversity Research Center, University of Texas at Arlington (UTA).

DNA extraction, amplification, and sequencing
Genomic DNA was isolated from muscle tissue taken from eleven specimens of Bothriechis using a Qiagen DNeasy extraction kit and protocol. Four mitochondrial gene fragments (NADH dehydrogenase subunit 4 (ND4), cytochrome b (cyt b), 12S rRNA, and 16S rRNA) were independently PCR-amplified as described in multiple studies (Knight and Mindell 1993;Arévalo et al. 1994;Parkinson et al. 1997;Parkinson et al. 2002) using Promega GoTaq® Green master mix, the primer pairs ND4 + LEU, Gludg + AtrCB3, L1091 + 12E, and 16SF + 16SR, and annealing temperatures 48°C, 48°C, 50°C, and 45°C, respectively. Sequencing was performed in both forward and reverse directions using the PCR primers on a Beckman Coulter automated capillary sequencer, and sequence chromatographs were edited using Sequencher 4.2. Sequences for each gene were aligned separately, first automatically using the program MUSCLE (Edgar 2004), and then manually rechecked using Se-Al v2.0a11. Gaps in alignments were treated as missing data. No internal stop codons were found in the two proteincoding gene fragments. Novel sequences from this study were deposited in GenBank (KC847255-289).
Previously published sequences of Bothriechis were downloaded from GenBank and combined with new sequence data generated in this study (Table 1) (Castoe et al. 2005(Castoe et al. , 2009Daza et al. 2010): Atropoides mexicanus and Cerrophidion wilsoni, both of which are sympatric with Bothriechis in Refugio de Vida Silvestre Texíguat ).

Phylogenetic analyses
Bayesian inference (BI) and maximum likelihood (ML) were implemented to reconstruct phylogenies for the Bothriechis ingroup taxa. To identify appropriate models of nucleotide substitution for both analyses, we used the program MrModeltest v2.2 (Nylander 2004), run in PAUP* v4.0b10 (Swofford 2002). We used Akaike information criterion (AIC) to select the best-fit models, as estimated by MrModeltest ( Table 2). The four gene fragments were concatenated (2,263 total bp), and this combined dataset was partitioned by gene and codon position (for cyt-b and ND4), resulting in a total of eight partitions as was shown to be justified in analysis of a similar dataset that included these four fragments from these species (Castoe and Parkinson 2006). Stems and loops were not partitioned separately due to a lack of informative characters. Phylogenetic analyses using BI were conducted with MrBayes v3.0b4 (Ronquist and Huelsenbeck 2003). Two simultaneous BI runs were conducted (with the default Markov chain Monte Carlo [MCMC] settings), and run for a total of 5.0 × 10 6 generations per run, sampling trees and parameters every 100 generations. We used PSRF values (output by MrBayes), together with plots of cold chain likelihood values and parameter estimates visualized in Tracer v1.5.4 (Rambaut and Drummond 2009), to confirm stationarity and convergence of MCMC runs. Based on this evaluation, the first 1.5 × 10 5 generations from each run were discarded as burn-in.
Phylogenetic relationships were inferred using ML as implemented in RAxML 7.2.8 (Stamatakis 2006, Stamatakis et al. 2008), using the same partitioning scheme described above for BI. Tree support was assessed using the rapid-bootstrapping algorithm with 1000 non-parametric bootstraps; all ML estimates and tests were run under the GTRCAT model, as models available for use in RAxML are limited to variations of the general time-reversible (GTR) model of nucleotide substitution.

Morphological data collection
We examined 34 preserved specimens of Bothriechis for this study (Appendix). Definitions of scale counts and morphological features follow Campbell and Lamar (2004) and bilateral characters are reported as right/left. Unsexed juvenile specimens were considered separately from adult males and females. For the holotype, we dissected and removed the partially everted hemipenis at the base. We then filled the hemipenis with warm water using a blunt-tipped syringe needle in order to attempt full eversion. We then removed the water and injected hot petroleum jelly with blue wax-dye until near maximum expansion was achieved. Finally, we tied the hemipenes and stored them in 70% ethanol. This procedure is modified from that of Myers and Cadle (2003) and Zaher and Prudente (2003) and is further described and illustrated in Smith and Ferrari-Castro (2008) and Jadin and Smith (2010). Hemipenial terminology follows Dowling and Savage (1960), Keogh (1999), and Savage (2002). Comparative morphological data on related species was taken primarily from Campbell and Lamar (2004) and Solórzano (2004). Color names and codes used in descriptions of coloration in life are from Köhler (2012); color notes in life were derived from a series of photographs of the holotype and paratypes.

Results
Bayesian and Maximum Likelihood phylogenetic analyses produced congruent topological results. Our phylogeny ( Fig. 1) is generally congruent with those of Castoe et al. (2009) and Daza et al. (2010), recovering two clades of nominal Bothriechis schlegelii (one Mesoamerican, one from Ecuador) rendered paraphyletic with respect to B. supraciliaris, and showing strong support for a B. marchi-B. thalassinus clade and a B. aurifer-B. rowleyi clade, together forming a B. aurifer-B. bicolor-B. marchi-B. rowleyi-B. thalassinus clade that geographically corresponds to Nuclear Central America ( Fig. 1). Both of our analyses recovered a weakly supported clade that includes the Costa Rica/Panama taxa B. lateralis and B. nigroviridis, along with the Bothriechis population from Refugio de Vida Silvestre Texíguat, Honduras. Within this primarily southern clade, nine samples from Refugio de Vida Silvestre Texíguat show virtually no genetic divergence from one another, and form a monophyletic group with a wellsupported (PP = 1.0; bs = 100) sister clade to B. lateralis from Costa Rica and western Panama (Fig. 1).
Based on the phylogenetic results, we examined morphological variation among populations of Bothriechis marchi sensu lato, which confirm the evolutionary and taxonomic distinctiveness of the Texíguat population as well as its apparent morphological affinity with a specimen from Parque Nacional Pico Bonito, approximately 75 km to the east of Refugio de Vida Silvestre Texíguat. We present the following description of this relict northern lineage as a new species.  (Nylander, 2004) for partitions of the dataset. intersupraoculars (3-7); superciliary scales absent; prelacunal scale fused to second supralabial on both sides; two known color patterns in juveniles, one brown (with a pale paraventral stripe and a series of short darker dorsal blotches and a dark brown postocular stripe bordered by yellow on its lower edge) and the other green (with a series of pale blue blotches and a deep blue postocular stripe bordered by pale blue on its lower edge); dorsal coloration in adults green with pale blue trim on anterior edges of dorsal scales, and pale blue postocular stripe with green along the keels in center of stripe; and iris pale green, pale gray, or pale tan. Description of holotype. An adult male (Figs 2, 3) with hemipenes partially everted, left removed; rostral broader than high (4.38 × 3.26 mm); 2 internasals an- teriorly; 2/2 canthals; 4 posterior intercanthals; supraoculars slightly more than two times as long as broad; 5 intersupraoculars; many scales on head of large size, including large, flat frontal and parietal scales; interrictals 25; single loreal, longer than high, bounded by upper two preoculars, canthal above, prelacunal and prefoveals below, and nasal; prefoveals 3/3, subfoveals 1/1; prelacunal and second supralabial fused; preoculars 3/3, upper largest, middle large and in contact with supralacunal; suboculars 2/2; postoculars 2/2; supralabials 10/10; mental broader than long (4.39 x 3.29 mm); infralabials 11/11; chin shields contacting first four pairs of infralabials; gulars between chin shields and first preventral 6/4; dorsal scale rows 19-19-15; preventrals 2; ventrals 161; cloacal scute undivided; 65 undivided subcaudals; tail spine short and blunt.

Partition Total characters Parsimony-informative characters Best-fit model
Measurement of holotype. Total length 734 mm; tail length 136 mm, comprising 18.5% of total length; head 29.8 mm from front face of rostral to posterior end of mandible; head 19 mm at broadest point; neck 7 mm directly behind jaws.
Hemipenis description of holotype. The partially everted left hemipenis of the holotype is described. Hemipenis at least 20 mm in total length and 13 mm in maximum width at level of crotch; on sulcate side base with several rows of small spines (< 0.5 mm) followed by rows of larger spines and hooks extending for 5 mm, largest protruding ca. 3.5 mm; asulcate side with minutely spined base up to 7 mm before level of bilobation; numerous small mesial spines (< 0.5 mm) arranged in rows present for 4 mm to the calyces, with peripheral section of each lobe containing nine spines and hooks (≥ 2 mm), five of which border lower rim of calyces; calyces follow spines and hooks distally; calyces scalloped, at least 10 rows at least 7 mm to apex of hemipenis on asulcate side; sulcus spermaticus deep and bifurcating ca. 4 mm before site of bilobation and extending upwards through spines and calyces likely to tip of each lobe; sulcus spermaticus bordered by two, occasionally three, columns of minute scales to the beginning of calyces, which form the border likely to the apex of the lobes. Although the majority of the hemipenial characters of this specimen are reported, the lack of a fully everted hemipenis leaves information on the total length and the nature of the calyces incomplete.
Coloration of holotype in life. Middorsal scales of the holotype Yellowish Spectrum Green (Color 128), fading to Light Grass Green (Color 109) laterally and becoming Chartreuse (Color 89) ventrolaterally, with Medium Greenish Yellow (Color 88) ventral scales; dorsal body scales edged anteriorly in Light Caribbean Blue (Color 163), with up to approximately one-fourth of the anterior end of some scales edged in blue; skin concealed between dorsal scales Spectrum Violet (Color 186); postoccipital stripe Light Caribbean Blue (Color 163), with keel and adjacent portion of three scales that lie within the postoccipital stripe Light Emerald Green (Color 142); terminal portion of tail Plumbeous (Color 295); iris Pale Bluish Gray (Color 287) with fine black reticulations most heavily concentrated around the pupil.
Color pattern of holotype in preservative. Scales on dorsal surfaces of the head and body blue-green, becoming more green laterally and yellow-green to yellow ventrally. Tail is mostly green with some grayish blue-green at the dorsal base. Pupil is cloudy and pale, surrounded by lime green iris heavily speckled with black. Two juvenile color patterns are present in this species (Fig. 5), one we refer to as a "green phase", the other as a "brown phase." Both juvenile phases have distinctively colored tail-tips, presumably used in caudal luring, and well-differentiated postocular stripes. The green phase (USNM 579874) has a Chartreuse (Color 89) dorsal ground color with Light Turquoise Green (Color 146) edging on the dorsal scales as well as on a series of irregular middorsal blotches, a Pale Green (Color 99) venter, and a Chartreuse (Color 89) head with a Jet Black (Color 300) postocular stripe, bordered above and below by Light Turquoise Green (Color 146); tip of tail Cobalt Blue (Color 180); the iris is Pale Neutral Gray (Color 296) with fine darker reticulations. The brown phase (USNM 579873) has a Robin Rufous (Color 29) ground color middorsally and anteriorly, becoming Salmon Color (Color 58) laterally and posteriorly, with a series of irregular Ferrunginous (Color 35) middorsal blotches, a Pale Buff (Color 1) ventral surface of head and venter becoming gradually darker (Pale Pinkish Buff [Color 3]) posteriorly, a Dark Salmon Color (Color 59) head with a Chestnut (Color 30) postocular stripe, bordered above and below by Light Buff (Color 2); tip of tail Sepia (Color 286); a Pale Buff (Color 1) paraventral stripe is present on the lower half of the first dorsal scale row and the lateral edge of the ventrals; dark speckling along lateral edge of the ventrals; the iris is Chamois (Color 84) with fine darker reticulations.
The type series of B. guifarroi demonstrates considerable variation in the condition and shape of the scales on the dorsal surface of the head (Fig. 6) Fig. 6D]), one adult male ([ Fig. 6E]), and one neonate (Fig. 6G) all have smaller keeled scales present anterior to the posteriormost edge of the orbits. As a result of demonstrating essentially the full range of dorsal head scale conditions in the type series, we do not consider this characteristic to be of value in diagnosing B. guifarroi from other congeners.
Etymology. The specific name guifarroi is a patronym used to honor our colleague and friend, Honduran environmental leader Mario Guifarro of Olancho. Don Mario fearlessly led grassroots efforts to stop illegal logging in the indigenous Tawahka territory of eastern Honduras, despite repeated assassination attempts and threats on his own life and those of his compatriots. Don Mario was murdered on 15 September 2007, ironically Honduras' Independence Day, while leading a mission to demarcate the boundaries of the Tawahka-Asangni Biosphere and stave off further illegal defor- estation. On 21 July 2008, the only witness to Mario's assassination, his son Shamir Guifarro Ramírez, was also murdered, along with Mario's father-in-law, Henry Arturo Chacón, and mother-in-law, Nelda Ochoa, after they were followed out of the city of Juticalpa by unknown assailants.
Distribution. Populations genetically confirmed to represent Bothriechis guifarroi are found between 1,015-1,450 m elevation in the western portion of the Cordillera Nombre de Dios, Department of Atlántida, Honduras, within the boundaries of Refugio de Vida Silvestre Texíguat (Fig. 7). These localities lie within the Premontane Wet Forest and peripherally in the Lower Montane Wet Forest formations of Holdridge (1967;as applied by McCranie and Wilson 2002).
Natural history. The holotype was found coiled at 2130h approximately 2.5 m above the ground among old leaf sheaths in the crown of a medium-sized understory palm in gallery forest alongside the Río Jilamito (Fig. 4A). Anurans of the genera Duellmanohyla and Ptychohyla were abundant in the immediate vicinity of the holotype. Two adult males (CM 156870 and MVZ 269305) were collected along a ridge on the north side of La Liberacíon on the night of 28 July 2010. CM 156870 was active on a small tree from 0.5-1.5 m above the ground; the second snake (MVZ 269305) was sitting coiled on the ground at the edge of the trail, and attempted to escape by crawling across the path when we approached. In the immediate vicinity of these snakes were numerous Craugastor rostralis active on the ground and Bolitoglossa sp. active on low vegetation. Two neonates were collected on the same night (2100-2200 h) on 18 June 2010, and an adult female (USNM 579875) was collected the next night, in an area of elfin forest at 1,380 m on the ridge called Cerro El Chino (Fig. 4B) above the remote ranch locality La Liberación (at 1,030 m). The brown-phase neonate (USNM 579873) was found atop a large, similarly-colored dead palm frond, while the greenphase neonate (USNM 579874) was sitting in essentially the same ambush position as USNM 579873, but on top of a living green frond. Amphibian species collected in the immediate vicinity of B. guifarroi include Bolitoglossa sp., Nototriton sp., Craugastor rostralis, Plectrohyla chrysopleura, and Ptychohyla spinipollex. Twelve Bolitoglossa sp. were encountered the same night as the two neonates, all while active on or around dead and living palm fronds in the immediate vicinity of the neonates.
Remarks. Townsend et al. (2012: 107) included a photograph of the holotype of Bothriechis guifarroi as "Bothriechis marchi." Bothriechis guifarroi is typically distinguished from B. marchi by having the prelacunal scale fused to the second supralabial; however, one male paratype of B. guifarroi (CM 156870) has the right prelacunal separated from the second supralabial (they are fused on the left side). Also, one specimen of B. marchi (MCZ R-33335) from the "mountains west of San Pedro Sula" also has fused prelacunals and second supralabials on both sides, and another specimen (MCZ R-32030) from "La Cumbre" has the left prelacunal separated from the second supralabial (with them fused on the right side).
We tentatively refer four additional specimens to Bothriechis guifarroi: two from a locality on the leeward side of Refugio de Vida Silvestre Texíguat (USNM 337488-89, from 2.5 airline km NNE of La Fortuna, Dept. Yoro, 1,550 m elevation), one from the central portion of the Cordillera Nombre de Dios (USNM 319942, from Quebrada de Oro in Parque Nacional Pico Bonito, Dept. Atlántida, 1,090 m elevation), and one from "Tela" (AMNH 46949). All four specimens also have fused prelacunals and second supralabials on both sides. USNM 319942 was collected as a juvenile and raised in captivity (Wilson and McCranie 1992;McCranie 2011a), and exhibited a similar juvenile color pattern as USNM 579873 before undergoing an ontogenetic shift in coloration to the bright green pattern exhibited by the type series of B. guifarroi. Campbell and Lamar (2004: plates 385-386) also provided illustrations of juvenile B. marchi s.l. that demonstrated two color morphs similar to those exhibited by B. guifarroi; however these two individuals were captive born in the Houston Zoo and known only from "Honduras." AMNH 46949 was collected sometime during or before 1932 by Douglas March of the Lancetilla Serpentarium, just outside of the seaside city of Tela. While the "Tela" locality is considered erroneous (Wilson and McCranie 1992), it is possible that AMNH 46949 was obtained from somewhere in the nearby western portion of the Cordillera Nombre de Dios. Given that at least some highland taxa found at both RVS Texíguat and Parque Nacional Pico Bonito are endemic sister species (e.g., Oedipina gephyra and O. petiola; McCranie and Townsend 2011), we refer USNM 319942 to B. guifarroi with the understanding that phylogenetic evaluation of the Pico Bonito population might eventually show those animals to represent a distinct taxon.

Conservation status of Bothriechis guifarroi.
With the description of Bothriechis guifarroi, there are now at least three species of palm pitvipers endemic to the Chortís Highlands, including B. marchi and B. thalassinus, with the potential for additional undescribed taxonomic diversity pending phylogenetic evaluation of allopatric populations in central Honduras. Based on the IUCN Red List criteria (2012), B. guifarroi should be classified as Critically Endangered (B1ab[iii]+2ab[iii]) due to its limited known area of occurrence and the potential for anthropogenic damage to its habitat. According to the algorithm developed by Wilson and McCranie (2004a), we calculated the Environmental Vulnerability Score (EVS) for B. guifarroi as 5+8+5=18, allocating it to the category of a high vulnerability species. Given this conservation status, B. guifarroi becomes the 48 th member of the critically endangered endemic component of the Honduran herpetofauna , and the tenth snake species and the first viperid species so designated. This species also warrants immediate consideration for protection under CITES, given its potential for exploitation in the pet trade.
The vicinity of the type locality of B. guifarroi is part of the relatively large and intact premontane rainforests and cloud forests of Refugio de Vida Silvestre Texíguat, one of the most important areas of herpetofaunal endemism in Mesoamerica . While deforestation in the leeward portion of Refugio de Vida Silvestre Texíguat has been documented since at least the early 1990's (see summary in , Townsend et al. (2012) reported that the windward portion of the reserve contained a large intact expanse of virtually undisturbed forest. In late 2012, a plot was cleared in the upper Río Jilamito watershed to the south of La Liberación, marking the first time farmers from adjacent Yoro had crossed into the Río Jilamito watershed and illegally cleared land (L. Herrera-B., pers. comm.). This is an ominous development, particularly in light of the recent drastic reduction in financial support for conservation efforts in Refugio de Vida Silvestre Texíguat, which had funded the training and employment of a team of local park guards during 2010-2012.
Herpetofaunal Endemism in the Chortís Highlands. Whereas Nuclear Central America has long been accepted as a region of high biodiversity and endemicity, some observers have further recognized the western and eastern portions of this highland block as distinct biogeographic entities (Johnson 1989;Campbell 1999;Townsend 2006Townsend , 2009. Eastern Nuclear Central America has been shown to have a distinctive component of endemic biodiversity, particularly in amphibians and reptiles (Wilson and Johnson 2010); however, molecular characterization of evolutionary diversification patterns in this region has been limited to a few studies of a restricted taxonomic breadth and broader geographic focus (e.g. Castoe et al. 2009). This region is geographically analogous to the Chortís Block, an allochthonous geological formation that currently forms the only modern continental portion of the Caribbean Tectonic Plate and the largest terrestrial segment of the contemporary Central American land bridge (Rogers 2003;Marshall 2007). The Chortís Block has a challengingly complex history, and recently has been the subject of increased focus, and sometimes contentious debate, within the geological research community (James 2007;Mann et al. 2007;Ortega-Gutiérrez et al. 2007;Silva-Romo 2008;Morán-Zenteno et al. 2009).
The majority of the geographical extent of the Chortís Highlands is found within the political boundaries of Honduras, the country with the highest degree of herpetofaunal endemism of any Central American nation (Wilson and Johnson 2010).  reported 91 endemic species (47 amphibians and 44 reptiles) from Honduras. Since that work went to press, an additional ten endemic species have been described from Honduras, including three new plethodontid salamanders (N. picucha, Townsend et al. 2011;N. tomamorum, Townsend et al. 2010 Townsend et al. 2013). With these species included, the total stands at 101 species, making B. guifarroi the 102nd described herpetofaunal species endemic to Honduras.
Bothriechis marchi and the status of populations from Yoro. We recognize Bothriechis marchi sensu stricto as occurring in localities in the Cordillera de Merendón in the Honduran departments of Cortés and Santa Bárbara along the border with Guatemala, as well as for at least one isolated locality in eastern Guatemala (Fig. 7). This Guatemalan locality, Cerro del Mono in Departamento de Zacapa, previously was the source of the only sequenced sample assigned to B. marchi (UTA R-52959; Castoe and Parkinson 2006). Although the population of Bothriechis from Cerro del Mono does not agree morphologically with the typical form of B. marchi (E.N. Smith, pers. comm.;see Plates 422-424 in Campbell and Lamar 2004, as B. thalassinus), the sequence data attributed to UTA R-52959 are not notably divergent from a sample of typical B. marchi (MVZ 263604) collected from the Sierra de Omoa in northern Honduras (Fig. 1).
The type localities of Bothriechis marchi and B. thalassinus are both in the Sierra de Caral, within approximately 20 km of one another on opposite sides of the Guatemala/Honduras border (Campbell and Lamar, 2004) suggesting that the two species occur either in parapatry or sympatry in the limited forest remaining in that mountain range (the type locality of B. marchi is not precise; Wilson and McCranie [1992] restricted it to the forested hills above El Oro, Departamento de Santa Bárbara). Individuals of both taxa in the Sierra de Caral exhibit a primarily green dorsal coloration, with some scattered bluish middorsal blotches (Campbell and Smith, 2000;Campbell and Lamar, 2004: plate 425). While the presence of B. thalassinus has not been confirmed by vouchered specimens from the Sierra de Omoa, the proximity of the Sierra de Caral and the Sierra de Omoa in northwestern Honduras and the similarity in coloration exhibited between these nominal taxa in that vicinity suggest the possibility that B. thalassinus may have gone unnoticed in the Sierra de Omoa. We have evaluated photographs of over a dozen individuals of green Bothriechis from the Sierra de Omoa encountered as part of an expedition-tourism operation in that area over the past five years, and have noted considerable variation in head scalation in the photographs. Unfortunately, none of the photographed individuals were collected nor were genetic samples taken to allow for more detailed evaluation of the Bothriechis of the Sierra de Omoa. In addition to the nominal form of B. marchi, it is likely that more than one species of Bothriechis occurs in sympatry or parapatry in the Sierra de Omoa, possibly including B. thalassinus and/or an unidentified sister taxon of B. guifarroi. Focused sampling and phylogenetic analysis of Bothriechis from the Sierra de Omoa is needed to better characterize the taxonomic diversity present in that mountain range.
Paraphyly in Bothriechis marchi sensu lato in terms of populations from the Cordillera de Merendón and the Cordillera Nombre de Dios, the latter now known to represent B. guifarroi, calls into question the taxonomic status of populations from isolated localities in the Sierra de Sulaco in Departmento de Yoro (Fig. 7). These populations are represented in collections by one specimen from Cerro de Pajarillos (USNM 561085), three specimens from the Montaña de Mataderos (FMNH 21777, MCZ R-38785-86), 14 specimens from "Portillo Grande" near Montaña Macuzal (FMNH 34732-35, 35895, 35999-601, 37217, 38542, 41621;MCZ R-38789-91), and two specimens from "Subirana Valley" (FMNH 21892, MCZ R-38788). Four of these specimens examined by us for this paper (MCZ R-38785-86, 38790-91) differ from B. guifarroi in having 21-19-15 dorsal scale rows (versus 19-19-15) and having varying conditions of fusion of the prelacunal and second supralabial (fused on both sides in MCZ R-38790, separate on both sides in MCZ R-38786, and fused on one side and separate on the other in MCZ R-38785 an R-38791). Given the considerable phylogenetic diversification presented by analysis of B. guifarroi and B. marchi s. s., we cannot justify assignment of the Yoro populations to either taxon in the absence of molecular characterization of those populations. Therefore, we tentatively refer to the Yoro populations as Bothriechis species inquirenda pending collection of fresh material and phylogenetic characterization. Efforts to secure this material are currently underway.
Evolutionary and biogeographic implications. The phylogenetic position of B. guifarroi has significant implications for our understanding of the biogeography and evolution of palm-pitvipers. Crother et al. (1992) first presented a phylogenetic hypothesis for the genus Bothriechis supporting an eyelash pitviper clade (B. schlegelii and B. supraciliaris) that is sister to a clade containing the remaining species of Bothriechis, all of which have highland-associated distributions (typically <1,000 m elevation; Fig.  7). Castoe et al. (2009) and Daza et al. (2010) provided the most recent phylogenetic estimates for nine species of Bothriechis, as part of a comparative phylogeographic study of three co-distributed, predominantly Mesoamerican genera of pitvipers. Their phylogenetic hypotheses supported the contention of Castoe and Parkinson (2006) that Bothriechis lateralis is the sister group to the Nuclear Central American highland species of the genus (B. aurifer, B. bicolor, B. marchi, B. rowleyi, and B. thalassinus) and rejected the Crother et al. (1992) and Taggart et al. (2001) estimates that B. lateralis is the sister clade to B. bicolor. Our phylogenetic hypothesis also supports a Nuclear Central American clade, with B. marchi and B. thalassinus in the Chortís Highlands comprising a group that is sister to B. aurifer, B. bicolor, and B. rowleyi from the Nuclear Central American highlands to the west.
The Cordillera Nombre de Dios, which includes Refugio de Vida Silvestre Texíguat and Parque Nacional Pico Bonito, is home to a distinct endemic biota that, in many cases, bears little resemblance to the endemic communities found in other nearby cloud forests (Wilson and McCranie 2004b). While published phylogenetic datasets of taxa endemic to the Cordillera Nombre de Dios are limited, evidence is beginning to accumulate that this region, and Refugio de Vida Silvestre Texíguat in particular, represents a paleo-refugium where relict lineages have accumulated and persisted while disappearing elsewhere in northern Central America. Bothriechis guifarroi provides the best evidence to date in support of the paleo-refugium hypothesis, given its phylogenetic relationship with B. lateralis and B. nigroviridis from southern Central America and lack of close evolutionary relationships with other taxa from Nuclear Central America. Another recently described species from Refugio de Vida Silvestre Texíguat, the moss salamander Nototriton tomamorum, is morphologically and phylogenetically more closely associated with the Costa Rican taxon N. richardi than it is with members of the northern N. barbouri group, which includes an undescribed taxon that occurs in sympatry with N. tomamorum . Isthmohyla insolita, another Texíguat endemic, is one of only two Isthmohyla in northern Central America (the other being I. melacaena from the Sierra de Omoa; neither species has been subjected to phylogenetic analysis), with the remaining 13 species restricted to highlands of Costa Rica and Panama (Köhler 2011). Castoe et al. (2009) estimated that Lower Central American and Nuclear Central American Bothriechis diverged at the Nicaraguan Depression between 5.73-9.87 mybp, based on the hypothesis that B. lateralis represented the sister lineage to the Nuclear Central American clade. Given the discovery of B. guifarroi, the timing of divergence across the Nicaraguan Depression could be much more recent, similar to that seen between Cerrophidion sasai and C. wilsoni (3.06-6.03 mybp; Castoe et al. 2009). Alternatively, it is possible that a Lower Central American Bothriechis (i.e., B. guifarroi, B. lateralis, B. nigroviridis) may have split from Nuclear Central American taxa via the Nicaraguan Depression earlier than suggested by Castoe et al. (2009) and Daza et al. (2010). Following additional sampling and the evaluation of populations presently referred to as B. sp. inquirenda, a reevaluation of Mesoamerican pitviper biogeography is warranted, and may shed further light on the complicated biogeographic relationship between northern and southern Central America.