Research Article |
Corresponding author: Werner Conradie ( werner@bayworld.co.za ) Academic editor: Robert Jadin
© 2022 Werner Conradie, Chad Keates, Ninda L. Baptista, Javier Lobón-Rovira.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Conradie W, Keates C, Baptista NL, Lobón-Rovira J (2022) Taxonomical review of Prosymna angolensis Boulenger, 1915 (Elapoidea, Prosymnidae) with the description of two new species. ZooKeys 1121: 97-143. https://doi.org/10.3897/zookeys.1121.85693
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African Shovel-snout snakes (Prosymna Gray, 1849) are small, semi-fossorial snakes with a unique compressed and beak-like snout. Prosymna occur mainly in the savanna of sub-Saharan Africa. Of the 16 currently recognised species, four occur in Angola: Prosymna ambigua Bocage, 1873, P. angolensis Boulenger, 1915, P. frontalis (Peters, 1867), and P. visseri FitzSimons, 1959. The taxonomical status and evolutionary relationships of P. angolensis have never been assessed due to the lack of genetic material. This species is known to occur from western Angola southwards to Namibia, and eastwards to Zambia, Botswana and Zimbabwe. The species shows considerable variation in dorsal colouration across its range, and with the lower ventral scales count, an ‘eastern race’ was suggested. In recent years, Prosymna material from different parts of Angola has been collected, and with phylogenetic analysis and High Resolution X-ray Computed Tomography, the taxonomic status of these populations can be reviewed. Strong phylogenetic evidence was found to include the angolensis subgroup as part of the larger sundevalli group, and the existence of three phylogenetic lineages within the angolensis subgroup were identified, which each exhibit clear morphological and colouration differences. One of these lineages is assigned to the nominotypical P. angolensis and the other two described as new species, one of which corroborates the distinct eastern population previously detected. These results reinforce that a considerable part of Angolan herpetological diversity is still to be described and the need for further studies.
As cobras-de-focinho-de-pá africanas (Prosymna) são pequenas cobras semi-fossoriais com um focinho único, achatado e em forma de bico, que ocorrem principalmente na savana da África subsaariana. Das 16 espécies actualmente reconhecidas, quatro existem em Angola: Prosymna ambigua Bocage, 1873, P. angolensis Boulenger, 1915, P. frontalis (Peters, 1867), e P. visseri FitzSimons, 1959. O estatuto taxonómico e as relações evolutivas de P. angolensis nunca foram avaliados devido à falta de material genético. A espécie ocorre desde o oeste de Angola, para sul até a Namíbia, e para este em direcção à Zâmbia, Botswana e Zimbábue. Na sua área de ocorrência, esta espécie tem variação principalmente na coloração dorsal, e com base no menor número de escamas ventrais, foi sugerida a existência de uma raça oriental. Recentemente foi amostrado material de Prosymna de várias partes de Angola, e com recurso a análises filogenéticas e a tomografia computadorizada de raios-X de alta resolução, foi possível rever o estatuto taxonómico destas populações. Encontrámos fortes evidências filogenéticas para incluir o subgrupo angolensis como parte do grupo sundevalli. Revelámos a existência de três linhagens filogenéticas no subgrupo angolensis. Atribuímos uma dessas linhagens ao P. angolensis nominotípico, e descrevemos as outras duas como espécies novas, uma das quais corrobora a população oriental previamente detectada. Estes resultados reforçam a ideia de que uma parte considerável da diversidade herpetológica angolana está ainda por descrever, e a necessidade de mais estudos.
Africa, Angola, cryptic species, fossorial, Kalahari, Serpentes
África, Angola, espécies crípticas, fossorial, Kalahari, Serpentes
African Shovel-snout snakes, belonging to the genus Prosymna, are small terrestrial snakes occurring in sub-Saharan Africa, mostly associated with semi-desert, savanna and miombo woodlands (
The first Prosymna recorded from Angola were documented by
Over the decades, the relationship of P. angolensis to other Prosymna species was addressed on a morphological basis by several authors, being considered as more closely related to P. sundevalli (
Since the description of P. angolensis, only a handful of specimens have been recorded from Angola (
Geographic records of the Prosymna angolensis group, based on all literature records and newly examined material, including nominotypical P. angolensis (blue triangles), Prosymna ‘Eastern’ = P. lisima sp. nov. (red circles) and Prosymna ‘Coastal’ = P. confusa sp. nov. (purple diamonds). White stars represent respective type localities. Question marks represent material tentatively assigned to that species, but needs confirmation. Blue lines represent major river systems. Top right inset represents the eastern Zambezi Region, to show sympatry between P. angolensis and Prosymna ‘Eastern’ = P. lisima sp. nov.
Recent herpetological surveys undertaken in eastern and southwestern Angola led to the collection of several specimens assigned to P. angolensis (
At several sites during the 2016–2019 National Geographic Okavango Wilderness Project surveys, standard Y-shape intercept drift fence funnel trap arrays were deployed to passively collect specimens. Each Y-shaped trap array consisted of three drift fences (each 10 m long and 50 cm high) radiating from a central pitfall trap, with six one-way funnel traps placed on adjacent sides of each drift fence and three one-way funnels at the terminal ends of each drift fence. Trap arrays were installed in varied habitats to ensure the highest possible richness of captured species (
Additionally, Prosymna angolensis material examined by
MBL Museu Bocage, Lisbon, Portugal;
USBN National Museum of Natural History, Washington, USA.
The original datasheets were made available to the authors by Sheila Broadley. Photographs of the following material were examined by WC:
A standard salt extraction method (
Gene | Primer | Source | Annealing temperature (°C) |
---|---|---|---|
16S | L2510: 5’—CGCCTGTTTATCAAAAACAT-—3’ |
|
50 |
H3080: 5’-CCGGTCTGAACTCAGATCACGT-3’ | |||
cyt-b | WWF: 5’—AAAYCAYCGTTGTWATTCAACTAC—3’ |
|
52 |
Cytb‐R2: 5’—GGGTGRAAKGGRATTTTATC—3’ | |||
ND2 | ND2-F1-METF1: 5’—AAGCTTTCGGGCCCATACC—3’ |
|
56 |
ND2-R1-TRPR3: 5’—TTTAGGGCTTTGAAGGC—3’ | |||
c-mos | S77: 5’—CAT GGACTGGGATCAGTTATG—3’ |
|
52 |
S78: 5’—CCTTGGGTGTGATTTTCT CACCT—3’ |
The phylogenetic placement of the newly collected Prosymna samples were estimated by comparing them with the sequenced data from
The sequence trace files were checked using BioEdit Sequence Alignment Editor v. 7.2.5 (
DAMBE v. 6.4.67 (
Maximum likelihood (ML) analysis was conducted using IQ-TREE v.2.1.2 (
Species delimitation was used to elucidate whether the putative Angolan taxa identified in the phylogenetic tree constituted separate species. Outgroup taxa were removed, leaving only members of Prosymna for single locus species delimitation. The 16S and cyt-b genes were chosen as they had the best representation. The following species delimitation analyses were used: Automatic Barcode Discovery (ABGD), Assemble Species by Automatic Partitioning (ASAP), Poisson Tree Processes (PTP), and Bayesian Poisson Tree Processes (bPTP).
Firstly, a 16S and cyt-b alignment were prepared and uploaded onto the ABGD web interface (abgd web (mnhn.fr), web version 07 July 2022) and the ASAP Web Interface (ASAP web (mnhn.fr), web version 07 July 2022). For ABGD, the followings settings were used: standard p-distance metrics, minimum barcode gap width (1), intraspecific divergence minima (0.001) and maxima (0.1) (
Secondly, a 16S and cyt-b ML tree were created in IQTREE, both using the GTR + I + G substitution model and the same settings implemented in the multi-locus phylogeny. The phylogenies were rendered as newick files and uploaded unrooted onto the bPTP web server (http://species.h-its.org/ptp/;
Pairwise distance analysis was implemented in MEGA X (
Morphological data was gathered from 39 Prosymna angolensis sensu lato (Table
Summary of morphological features and measurements for Prosymna angolensis group. For abbreviations see Materials and methods. Notes: * including data on the Ebanga (
P. angolensis | P. angolensis | P. lisima sp. nov. | P. lisima sp. nov. | P. confusa sp. nov.* | |
---|---|---|---|---|---|
Males | Females | Males | Females | Females | |
Sample size | 6 | 21 | 7 | 3 | 3 |
SVL (mm) | 160–248 (208.7 ± 29.8) | 127–305 (224.7 ± 51.1) | 138–198 (180.7 ± 20.5) | 168–275 (214.3 ± 54.9) | 231–240 (235.5± 6.4) |
TL (mm) | 22–30 (26.5 ± 2.7) | 12–27 (29.9 ± 3.7) | 17.0–28.9 (24.6 ± 3.7) | 19.3–28.0 (22.6 ± 4.7) | 23–29 (26.0 ± 4.2) |
TL/total length ratio (%) | 10.1–13.3 (11.40 ± 1.2) | 6.5–9.4 (7.9 ± 0.9) | 11.0–13.0 (12.0 ± 0.8) | 8.8–10.9 (9.7 ± 1.1) | 9.1–108 (9.9 ± 1.2) |
Ventral scales | 126–155 (138.1 ± 10.4) | 134–163 (147.5 ± 8.3) | 116–124 (120.2 ± 3.1) | 117–129 (122.3 ± 6.1) | 143–155 (149.7 ± 6.1) |
Subcaudal scales | 22–28 (25.4 ± 1.8) | 16–25 (18.9 ± 2.5) | 22–26 (23.7 ± 1.9) | 18–24 (20.0 ± 3.5) | 17–26 (21.0 ± 4.6) |
Midbody scale rows | 17-15-15 (rarely 19-15-15) | 17-15-15 | 17-15-15 | ||
Cloacal scale | Entire | Entire | Entire | ||
Preoculars | 1 | 1 (rarely 2) | 1 | ||
Postoculars | 1 (rarely 0 or 2) | 2 | 1 | ||
Temporals | 1+2 (rarely 2+2, 2, 3) | 1+2 (rarely 1+2+3) | 1+5 | ||
Supralabials (contacting eye) | 6 (3,4) [rarely 5 (2,3) or 7 (3,4)] | 6 (3,4) [rarely 5 (2,3)] | 5–6 (3, 4) | ||
Infralabials (in contact with 1st chin shield) | 7 (3) [rarely 8 (3)] | 7 (3) | 7 (3) | ||
Loreal | Present | Present | Present |
For morphological comparison we preassigned material into three distinct groups based on the shared morphological and colouration differences observed by
To test if the ventral and subcaudal scale counts differs significantly between Prosymna ‘Eastern’ and P. angolensis sensu stricto as reported by
In order to identify diagnostic osteological characters and evaluate cranial variability within this group, we compared High Resolution X-ray Computed Tomography (HRCT) of newly collected material from Angola with Prosymna data provided by
To enable the production of up-to-date occurrence maps for the Prosymna angolensis group, data were sourced from published datasets (e.g.,
Maximum likelihood (bootstrap support [BS]) and both Bayesian Inference analyses (MrBayes posterior probability [MBPP]; BEAST posterior probability [BPP]) showed strong support for the monophyly of Prosymna (BS 100%, MBPP 1.0, BPP 1.0). (Fig.
a Maximum likelihood (IQTREE) concatenated phylogeny with BI BEAST and BI MrBayes support overlain. Each of the species groups are demarcated by coloured vertical bars at the right margin b maximum likelihood (IQTREE) phylogenies (16S and cyt-b) with gene-specific single-locus species delimitation analyses results overlain. The bars to the right of the phylogeny represent the putative taxa assignments for each analysis and the values beneath the bars denote the total number of putative taxa for each analysis.
The newly sequenced P. angolensis sensu lato material (hereafter ‘angolensis subgroup’) formed a monophyletic group, that was recovered within the sundevalli group by all three algorithms (BS 100%, MBPP 1.0, BPP 1.0). All three algorithms also retrieved identical topological sub-structuring within the sundevalli group, with strong support for the sister relationship between P. lineata and the rest of the species in the group. The sister relationship between P. sundevalli + P. bivittata and the angolensis subgroup was however not supported by any of the algorithms. Whilst all the phylogenies recovered the angolensis subgroup as monophyletic, they differed in their sub-structuring, with ML (BS 100%) and BEAST (BPP 1.0) recovering Prosymna ‘Coastal’ as sister to Prosymna ‘Eastern’ + P. angolensis sensu stricto and MrBayes (MBPP 1.0) recovering P. angolensis sensu stricto as sister to Prosymna ‘Coastal’ + Prosymna ‘Eastern’. All three algorithms recovered similar sub-structuring within the Prosymna ‘Eastern’ lineage with a specimen from Quembo River bridge camp (PEM R27381, Appendix
The single locus ML phylogenies (Fig.
The species delimitation analyses employed across both the 16S and cyt-b phylogenies recovered a substantial amount of putative taxa, with vastly different estimates between the different analyses. Across both phylogenies, ABGD and ASAP were more conservative and PTP and bPTP were more liberal with the number of putative taxa. Whilst the differential sampling afforded to the different gene phylogenies resulted in differing numbers of putative taxa, it must be noted that all four species delimitation methods recognised Prosymna ‘Eastern’, Prosymna ‘Coastal’ and P. angolensis sensu stricto as independent species when using both the 16S and cyt-b marker. While not the focus of this study, notable cryptic speciation was also recovered in P. frontalis, P. ambigua, and P. stuhlmanni when using either the 16S or cyt-b marker.
The average 16S pairwise divergence separating species within the genus was 8.11% (± 0.23% s.e. – standard error) when the angolensis subgroup is considered a single species (Table
For the cyt-b gene, the average pairwise divergence separating species of the genus was 20.60% (± 0.42% s.e.) (Table
Sequence divergence (uncorrected pairwise distance values) for 16S and cyt-b separating the species of Prosymna. Numbers in the diagonal (in bold) denote intraspecific divergences, numbers below the diagonal denote interspecific divergences and numbers above the diagonal denote the standard error of the interspecific divergences. NA–Not Available.
16S | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | ||
1 | P. ambigua | 3.02 | 1.28 | 1.19 | 1.23 | 1.07 | 1.28 | 1.15 | 1.03 | 1.36 | 1.31 | 1.13 | 1.22 | 1.19 |
2 | P. angolensis | 8.58 | NA | 1.19 | 0.89 | 1.08 | 1.37 | 1.21 | 1.21 | 0.75 | 1.39 | 1.23 | 1.16 | 1.30 |
3 | P. bivittata | 7.28 | 6.26 | 0 | 1.00 | 1.12 | 1.39 | 1.35 | 1.09 | 1.28 | 1.41 | 1.23 | 0.95 | 1.31 |
4 | P. confusa sp. nov. ‘Coastal’ | 8.34 | 3.75 | 5.07 | NA | 1.11 | 1.28 | 1.29 | 1.15 | 0.99 | 1.30 | 1.25 | 1.01 | 1.32 |
5 | P. frontalis | 8.11 | 7.71 | 8.01 | 8.14 | 5.28 | 1.22 | 1.01 | 0.99 | 1.15 | 1.23 | 0.93 | 1.08 | 1.13 |
6 | P. greigerti | 9.55 | 9.96 | 10.44 | 8.82 | 9.84 | 1.55 | 1.28 | 1.30 | 1.38 | 0.64 | 1.34 | 1.36 | 1.28 |
7 | P. janii | 7.51 | 7.32 | 8.63 | 7.96 | 6.75 | 8.35 | 0 | 1.02 | 1.30 | 1.24 | 0.93 | 1.29 | 1.23 |
8 | P. lineata | 6.50 | 6.73 | 5.87 | 6.39 | 6.93 | 9.44 | 5.78 | 0.69 | 1.22 | 1.27 | 0.92 | 1.07 | 1.20 |
9 | P. lisima sp. nov. ‘Eastern’ | 10.06 | 2.92 | 7.53 | 4.76 | 8.56 | 10.85 | 8.53 | 7.36 | 0.63 | 1.40 | 1.30 | 1.25 | 1.27 |
10 | P. meleagris | 9.62 | 10.11 | 10.31 | 9.16 | 10.26 | 2.82 | 8.39 | 9.47 | 11.03 | 2.52 | 1.28 | 1.39 | 1.32 |
11 | P. stuhlmanni | 7.58 | 7.76 | 7.51 | 7.52 | 6.16 | 9.24 | 3.96 | 5.07 | 8.37 | 9.31 | NA | 1.20 | 1.25 |
12 | P. sundevalli | 8.56 | 7.63 | 4.97 | 5.63 | 7.85 | 11.11 | 8.92 | 6.32 | 8.16 | 11.68 | 8.04 | 1.54 | 1.28 |
13 | P. visseri | 7.88 | 8.38 | 8.01 | 8.36 | 8.01 | 9.07 | 7.40 | 7.90 | 7.76 | 9.49 | 7.77 | 8.64 | 0.74 |
cyt-b | ||||||||||||||
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | ||||
1 | P. angolensis | NA | 1.43 | 1.40 | 1.38 | 1.58 | 1.56 | 1.31 | 1.67 | 1.70 | 1.39 | 1.64 | ||
2 | P. bivittata | 15.76 | 0.33 | 1.41 | 1.32 | 1.60 | 1.55 | 1.57 | 1.70 | 1.72 | 1.40 | 1.64 | ||
3 | P. confusa sp. nov. ‘Coastal’ | 13.25 | 16.35 | NA | 1.38 | 1.62 | 1.60 | 1.47 | 1.70 | 1.72 | 1.32 | 1.74 | ||
4 | P. frontalis | 19.95 | 19.72 | 19.28 | 17.97 | 1.44 | 1.45 | 1.44 | 1.49 | 1.35 | 1.34 | 1.47 | ||
5 | P. janii | 19.64 | 21.50 | 19.91 | 20.17 | 1.08 | 1.59 | 1.57 | 1.72 | 1.62 | 1.51 | 1.67 | ||
6 | P. lineata | 18.92 | 17.84 | 18.36 | 20.18 | 20.16 | 0.22 | 1.55 | 1.82 | 1.73 | 1.38 | 1.66 | ||
7 | P. lisima sp. nov. ‘Eastern’ | 13.90 | 18.73 | 15.55 | 21.38 | 19.75 | 17.67 | 1.58 | 1.71 | 1.69 | 1.39 | 1.58 | ||
8 | P. ruspolii | 23.86 | 24.05 | 23.75 | 23.45 | 24.40 | 25.26 | 23.81 | NA | 1.80 | 1.67 | 1.69 | ||
9 | P. stuhlmanni | 20.75 | 20.92 | 20.83 | 18.79 | 17.97 | 20.52 | 20.68 | 23.47 | NA | 1.45 | 1.65 | ||
10 | P. sundevalli | 15.99 | 16.08 | 14.63 | 19.51 | 18.97 | 15.39 | 17.61 | 23.70 | 17.52 | 6.49 | 1.59 | ||
11 | P. visseri | 21.87 | 22.29 | 22.38 | 21.27 | 20.33 | 22.57 | 21.73 | 25.04 | 19.56 | 20.49 | 3.09 |
There was a degree of overlap in most morphological features (measurements and scale counts) for all the material examined (Table
Summary boxplots (top whisker–maximum value; lower whisker–minimum value; dark horizontal line–median; box–1st and 3rd quartiles, open circles–data points) comparing ventral and subcaudal scales corrected for size among the species of Prosymna separated by sex: Prosymna angolensis (blue) and Prosymna lisima sp. nov. (red); p-value of non-parametric Wilcoxon test is indicated at bottom of each boxplot. Prosymna confusa sp. nov. is not included due to small sample size.
The colouration of P. angolensis sensu stricto (24 out of 28 examined) varied from pale grey to yellow-brown with a large black bar behind the head and a series of smaller paired black spots along the back, similar to P. sundevalli. In some cases (2 out of 28 examined), these black spots are very faint and disappear anteriorly or form continuous faint paravertebral stripes (2 out of 28 examined), similar to P. lineata (Fig.
Photos of live P. lisima sp. nov. from eastern Angola A PEM R23457 from Quembo River Source, Moxico Province, Angola B PEM R23483 from Cuando River Source, Moxico Province, Angola C PEM R23512 from Cuito Source Lake, Moxico Province, Angola D PEM R27381 from Quembo River bridge camp, Moxico Province, Angola.
The osteological analysis has shown that material within the angolensis subgroup presents the same common features shared across Prosymna: a compact and rigid skull, anterior reduction of the maxilla, enlargement of the posterior maxillary teeth and reduced palatine, and a unique tooth loci formula with seven reduced tooth loci and four or five posterior lancet-shaped and enlarged tooth loci (see
The angolensis subgroup shares some cranial features with the rest of the sundevalli group, such as an elongated maxillary process, with the premaxilla being in contact with the maxilla and the lack of a postorbital bone (except Prosymna ‘Eastern’, see below). It differs from the sundevalli group by the absence of partial or total fusion between the braincase and the parietal bone and the absence of lateral tubercles in the premaxilla in angolensis subgroup (vs. present in sundevalli group).
The Prosymna ‘Eastern’ material is unique in possessing a well-developed postorbital bone, which is shared with P. cf. frontalis (although much more reduced) and the ambigua group (well developed, including here corroborated for P. janii). Two of the angolensis subgroup lineages (P. angolensis sensu stricto and Prosymna ‘Eastern’) present an unfused braincase (only known to be present in ambigua group, here corroborated for P. janii); however, the Prosymna ‘Coastal’ specimen presents a fused braincase.
Finally, the osteological comparison demonstrated the presence of unique diagnostic features between the three lineages from the angolensis subgroup, i.e., presence/absence of postorbital bone, fused/unfused braincases, and the number of palatine teeth and frontal foramina, which are addressed in more detail below.
Based on the genetic, morphological, and colouration differences discussed above, we recognise all three lineages within the angolensis subgroup as independently evolving lineages and describe two (Prosymna ‘Eastern’ and Prosymna ‘Coastal’) of them as new species. We follow the general lineage-based species concept (
Prosymna frontalis:
Prosymna ambigua:
Prosymna ambigua ambigua:
Prosymna angolensis:
When
Neotype (Fig.
See Table
Skull osteology and teeth (Figs
Colouration in life (Fig.
Hemipenis. Short hemipenis with a length that reaches the 9–10th ventral scales (
Size. Males vary from 160–248 (208.7 ± 29.8) mm SVL and 22–30 (26.5 ± 2.7) mm TL, with the largest male measuring 248+28 = 276 mm (NMZB 9532, NE of Waterberg, Namibia). Females vary from 127–305 (224.7 ± 51.1) mm SVL and 12–27 (19.9 ± 3.7) mm TL, with the largest female measuring 305+22 = 327 mm (
This is a semi-fossorial species that feeds exclusively on reptile eggs, using its blade-like rear maxillary teeth to puncture the eggs, similar to other Prosymna species.
Currently the species is known to occur in three main geographic clusters: west-central Angola, north-central Namibia and isolated records from the Zambezi Region in north-eastern Namibia, northern Botswana and north-western Zimbabwe (Fig.
Angola: Bela-Vista (Missão do Dondi), -12.36667, 16.20000 (
Prosymna angolensis:
Holotype (male). PEM R23512, collected from Cuito River source lake (-12.68866, 18.36025, 1426 m a.s.l.), Moxico Province, Angola by Werner Conradie and James Harvey on 26 November 2016. Paratypes (five males). PEM R27381, collected from Quembo River lower bridge (-13.526579, 19.278096, 1248 m a.s.l.), Moxico Province, Angola by Werner Conradie, Chad Keates and Timóteo Júlio on 27 November 2019; PEM R23457–8, collected from Quembo River source (-13.13586, 19.04709, 1368 m a.s.l.), Moxico Province, Angola by Werner Conradie on 3 November 2016; PEM R23483, Cuando River source (-13.00164, 19.1296, 1372 m a.s.l.) Moxico Province, Angola by Werner Conradie and James Harvey on 17 November 2016; PEM R23510, collected from Cuito River source lake (-12.68866, 18.36025, 1426 m a.s.l.), Moxico Province, Angola by Werner Conradie and James Harvey on 26 November 2016. Paratypes (two females). PEM R23456, collected from Quembo River source (-13.13586, 19.04709, 1368 m a.s.l.), Moxico Province, Angola by Werner Conradie on 3 November 2016; PEM R23511, Cuito River source lake (-12.68866, 18.36025, 1426 m a.s.l.), Moxico Province, Angola by Werner Conradie and James Harvey on 26 November 2016.
NMZB-UM 10096, Kalabo (approx. -14.99391, 22.67795), Zambia; NMZB-UM 21272, 15 km WSW of Katima Mulilo (approx. -17.61448, 24.20593), Namibia. A specimen from Kuvangu [= Vila-da-Ponte], -14.46667, 16.3000 (
The new species differs from other Prosymna in the following characters: rostral sharply depressed and angular (vs. rounded in P. visseri); presences of a single band-like internasals (vs. paired internasals in P. somalica, P. bivittata, P. sudevalli, P. lineata); dorsal scales smooth (keeled in P. janii); midbody scale rows 15–17 (vs. 19–21 in P. pitmani); 6 supralabials, with 3rd and 4th entering orbit (vs. 5 supralabials, with 2nd and 3rd entering orbit in P. meleagris and P. greigerti); single apical pits on dorsal scales (vs. paired apical pits in P. ruspolii); lower number of ventral scales in both sexes (116–129 vs. 153–199 in P. frontalis); dorsum with dark black spots (vs. scarlet head and dark body in P. ornatissima; uniform dark brown to grey in P. ambigua and P. stuhlmanni). It further differs from its closest congener, P. angolensis, in having two post oculars (vs. one), dorsal large black blotches mostly fused (vs. mostly small paired dorsal grey to black spots), postorbital bone present (vs. absent) and by the presence of four to five well-developed palatine teeth (vs. three reduced teeth).
The name lisima is derived from the locally spoken Luchaze language in the region of the type locality meaning ‘source’. The full phrase used, ‘Lisima Lwa Mwondo’, is translated as “source of life”. This is a reference to central Angola, a high rainfall area where some of the most important rivers in Angola arise. This water makes it its way to the Okavango Delta, sustaining wildlife and local communities in Angola, Namibia and Botswana.
(Fig.
Morphological features and measurements for the type series of Prosymna lisima sp. nov. (SVL = snout-vent length, t = truncated).
Catalogue number | PEM R23512 | PEM R23456 | PEM R23457 | PEM R23458 | PEM R23483 | PEM R23510 | PEM R23511 | PEM R27381 |
---|---|---|---|---|---|---|---|---|
Type status | Holotype | Paratype | Paratype | Paratype | Paratype | Paratype | Paratype | Paratype |
Sex | Male | Female | Male | Male | Male | Male | Female | Male |
SVL+TL = total length mm | 193+28.9 = 221.9 | 200+19.3 = 219.3 | 194+25.8 = 219.8 | 198+24.6 = 222.6 | 181+23.8 = 204.8 | 186+26.3 = 212.3 | 168+20.6 = 188.6 | 138+17t = 155 |
TL/total length ratio (%) | 13.0 | 8.8 | 11.7 | 11.1 | 11.6 | 12.4 | 10.9 | 11.0 |
Midbody scale rows | 17-17-15 | 17-17-15 | 17-15-15 | 17-17-15 | 17-15-15 | 17-17-15 | 17-15-15 | 17-15-15 |
Ventral scales | 122 | 121 | 117 | 124 | 121 | 116 | 117 | 122 |
Subcaudal scales | 26 | 18 | 22 | 23 | 22 | 23 | 24 | 21t |
Cloacal Scale | Entire | Entire | Entire | Entire | Entire | Entire | Entire | Entire |
Preoculars | 1/2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 |
Postoculars | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
Temporals | 1+2 | 1+2 | 1+2 | 1+2 | 1+2 | 1+2 | 1+2 | 1+2+3 |
Supralabials (contacting eye) | 6 (3,4) | 6 (3,4) | 6 (3,4) | 6 (3,4) | 5 (2,3)/6 (3,4) | 6 (3,4) | 6 (3,4) | 6 (3,4) |
Infralabials (in contact with 1st chin shield) | 7 (3) | 7 (3) | 7 (3) | 7 (3) | 7 (3) | 7 (3) | 7 (3) | 7 (3) |
Loreal | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
Dorsal colouration | 26 fused blotches | 30 fused blotches | 21 fused blotches | 31 fused blotches | 22 fused blotches | 26 fused blotches | 27 fused blotches | 36 paired blotches |
Colouration. In life (Figs
Paratype and additional material variation. See Table
Skull osteology and teeth (Figs
Hemipenis. Short simple structure, only reaching the 6–9th ventral scale. Single non-bifurcated sulcus. Ornamentation is flounced. Proximal third is smooth. Distal portion with four to five flounces that starts at the sulcal fold and encircle the whole organ, the most proximal often branched, forming a pocket of which the edges is smooth, tapering into a distal point. Retractor muscle is straight.
All specimens were caught in late November during the rainy season. At this time, many adult lacertids, Ichnotropis capensis and I. cf. grandiceps, were also observed mating in the same habitat. Prosymna are well known to prey on soft-shell lizard eggs, and P. lisima sp. nov. may actively seek out these lacertids’ eggs. Only two of the females had stomach contents, while all the males had empty stomachs. The largest female (PEM R23456) had three empty lizard egg shells in the hind gut, three empty egg shells at the rear end of the stomach, and four undigested lizard eggs in the main stomach (Fig.
Currently only known from east-central Angola, western Zambia and the Zambezi Region of north-eastern Namibia. In the region of Katima Mulilo (eastern Zambezi Region, Namibia) it occurs in sympatry with its sister species, P. angolensis (Fig.
Prosymna angolensis:
Prosymna ambigua:
Holotype (female). PEM R24013, collected from 20 km west of Lola on the road northwest to Camacuio, on the edge of Bentiaba River (-14.27583, 13.45806, 791 m a.s.l.), Namibe Province, Angola by William R. Branch, Pedro Vaz Pinto and João S. de Almeida on 2 November 2015.
The new species differs from other Prosymna species in the following characters: rostral sharply depressed and angular (vs. rounded in P. visseri); presence of a single band-like internasal (vs. paired internasals in P. somalica, P. bivittata, P. sundevalli, P. lineata); dorsal scales smooth (keeled in P. janii); midbody scale rows 15–17 (vs. 19–21 in P. pitmani); six supralabials, with 3rd and 4th entering orbit (vs. five supralabials, with 2nd and 3rd entering orbit in P. meleagris and P. greigerti); single apical pits on dorsal scales (vs. paired apical pits in P. ruspolii); lower number of ventral scales in both sexes (116–129 vs. 153–199 in P. frontalis); dorsum uniform dark grey (vs. scarlet head and dark body in P. ornatissima). It further differs from its closest congeners in the angolensis group: one postocular (vs. two in P. lisima sp. nov.), dorsum uniform grey (vs. dorsum with large mostly fused black blotches in P. lisima sp. nov. and mostly smaller paired longitudinal rows of grey to black spots in P. angolensis), postorbital bone absence (vs. present in P. lisima sp. nov.), presence of two well-develop palatine teeth (vs. four to five in P. lisima sp. nov. and three reduced teeth in P. angolensis), fused braincase (vs. unfused in P. angolensis and P. lisima sp. nov.) and two frontal foramina (vs. three to four in P. angolensis and P. lisima sp. nov.).
When the late Bill Branch collected the holotype, he was unsure of its identification and referred to it as an unusual specimen that could not be assigned to any known species from Angola. He later referred to it as P. ambigua (
(Fig.
Colouration. In life (Fig.
Additional material variation. See Table
Skull osteology and teeth (Figs
Hemipenis. Unknown.
The holotype was found actively moving around near a large rock outcrop during the day.
This species is endemic to southwestern Angola (Fig.
The taxonomic status of Prosymna angolensis has been the subject of debate by several researchers over time. Thanks to the access to new material, we are able to describe two new species and provide the first phylogenetic placement of P. angolensis. Our work recovered a similar topology to that of
While the phylogenetic placement between lineages within the angolensis subgroup remains unresolved (particularly P. angolensis sensu stricto) and species pairwise distances are below those of their congeners; the topological support offered by ML and BEAST coupled with species delimitation analyses lends support for the distinctiveness of the two novel taxa at a genetic level. A single, near topotypical, sample of P. angolensis was available for molecular analysis and, based on the disjunct distribution between the populations of Angola and Namibia, Botswana, and Zimbabwe of P. angolensis, cryptic diversity is expected and worth further investigation.
Whilst our phylogeny lacks the resolution necessary to resolve the inter-specific relationships within the sundevalli group, which is likely a product of incomplete taxon sampling, it is clear that the angolensis subgroup is within the larger sundevalli group, as suggested by
Because we only compared a small series of skulls for the osteological characterisation (one or two scans per species), further intra-specific variation may exist, thus the osteological differences observed should be taken with caution. That said, there were some striking differences among the groups, as mentioned by
In Prosymna cf. frontalis, the anterior portion of the maxilla has no teeth, similar to that in P. visseri.
The descriptions of two new species, P. confusa sp. nov., endemic from dry habitats in southwestern Angola, and P. lisima sp. nov., associated to the Kalahari sands from Angola to neighbouring countries to the east, are an indication of how much diversity is likely still to be described from these regions. In the last decade a renewed interest in the Angolan herpetofauna has led to numerous expeditions to remote areas. Consequently, the number of species recorded from the country, has increased considerably (
We thank the Wild Bird Trust, which administrates the National Geographic Okavango Wilderness Project (2015–2019 National Geographic Society grant). Material was collected and exported under the following export permits issued by the Angolan Ministry of Environment Institute of Biodiversity (MINAMB): 31/GGPCC/2016, 151/INBAC/MINAMB/2019). Fieldwork in Bicuar National Park was carried out in the framework of the Southern African Science Service Centre for Climate Change and Adaptive Land Management (SASSCAL) project, sponsored by the German Federal Ministry of Education and Research (BMBF) under promotion number 01LG1201M. The genetic component of this work was funded through the Wild Bird Trust grant to WC (grant WBT01 and OWP017). We would also like to acknowledge the use of infrastructure and equipment provided by the NRF-SAIAB Aquatic Genomics Research Platform and the funding channeled through the NRF-SAIAB Institutional Support System. We thank Luke Verburgt, James Harvey, Timóteo Júlio, Pedro Vaz Pinto, and the late Bill Branch for field assistance or collecting valuable specimens. Francois Theart and Justin Nicolau kindly provided comparative photographs from Namibia and Angola, respectively. We thank Enviro-Insight for constructing and donating the drift fences required for the trapping animals. WC thanks the Eastern Cape Province Department of Sport, Recreation, Arts and Culture (DSRAC) and Port Elizabeth Museum (Bayworld) for granting special leave to take part in these surveys. JLR and NLB are currently supported by Fundação para a Ciência e Tecnologia (FCT) contracts PD/BD/140808/2018 and PD/BD/140810/2018, respectively. Ethical clearance for the study was obtained from the Port Elizabeth Museum (Bayworld) ethics committee (Ethical Clearance no. 2013 & 2017-2). We thank Sheila Broadley who kindly made available Don Broadley’s data on the Prosymna angolensis group. Photos of key museum specimens was kindly provided by Georg Gassner and Alice Schumacher (Natural History Museum Vienna), Jose Rosado, Breda Zimkus, and Joseph Martinez (Museum of Comparative Zoology, Harvard University), Lauren Vonnahme (American Museum of Natural History), and Jofred Opperman (Iziko Museums of South Africa). We also further thank Jofred Opperman (Iziko Museums of South Africa) for facilitating the loan of specimens to be CT-scanned. We thank Muofhe Tshibalanganda (Central Analytic Facilities, Stellenbosch University) for performing the CT-scanning. We further want to express our gratitude to the two reviewers, Krystal Tolley and Luís Ceríaco, whose edits helped to improve the paper.
List of samples used in this study and their associated metadata. NA–Not Available.
Species | Voucher ID | Locality | Molecular Markers | |||||
---|---|---|---|---|---|---|---|---|
16S | ND2 | cyt-b | c-mos | RAG1 | ENC-1 | |||
Ingroup | ||||||||
Prosymna angolensis | NB 0521/CHL 0521 | Bicuar National Park, Huíla, Angola | OP288036 | OP289543 | OP289533 | OP289553 | NA | NA |
P. confusa sp. nov. ‘Coastal’ | AG 014/PEM R24013 | 20 km W Lola, road northwest to Camacuio, Namibe, Angola | OP288044 | OP289552 | OP289542 | OP289562 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4694/PEM R23456 | Quembo River Source, Moxico, Angola | OP288037 | OP289544 | OP289534 | OP289554 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4696/PEM R23457 | Quembo River Source, Moxico, Angola | OP288038 | OP289545 | OP289535 | OP289555 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4706/PEM R23458 | Quembo River Source, Moxico, Angola | OP288039 | OP289546 | OP289536 | OP289556 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4810/PEM R23483 | Cuando River Source, Moxico, Angola | OP288040 | OP289547 | OP289537 | OP289557 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4870/PEM R23510 | Cuito Source Lake, Moxico, Angola | OP288041 | OP289548 | OP289538 | OP289558 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4863/PEM R23511 | Cuito Source Lake, Moxico, Angola | OP288042 | OP289549 | OP289539 | OP289559 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-4862/PEM R23512 | Cuito Source Lake, Moxico, Angola | OP288043 | OP289550 | OP289540 | OP289560 | NA | NA |
P. lisima sp. nov. ‘Eastern’ | WC-6844/PEM R27381 | Quembo River bridge camp, Moxico, Angola | NA | OP289551 | OP289541 | OP289561 | NA | NA |
P. ambigua |
|
Cangandala NP, Malanje, Angola | MT453136 | MT460633 | NA | MT460596 | MT460655 | NA |
P. ambigua | GJ 2762 | Malanje, Angola | MT453137 | MT460634 | NA | MT460597 | MT460656 | NA |
P. ambigua | PEM R16763 | Gnimeti River, Klein’s Camp, Loliondo Game Controlled Area, Mara, Tanzania | MT453112 | NA | NA | MT460579 | MT460635 | NA |
P. bivittata | AMB (53F6) | NA | MT453113 | MT460610 | NA | NA | NA | NA |
P. bivittata | PEM R17431 | Mkhuze Falls Private Game Reserve, KwaZulu-Natal, South Africa | MT453114 | MT460611 | NA | NA | MT460636 | NA |
P. bivittata | PEM R17432 | Mkhuze Falls Private Game Reserve, KwaZulu-Natal, South Africa | MT453115 | MT460612 | MT482412 | MT460580 | MT460637 | MT460598 |
P. bivittata | PEM R17433 | Mkhuze Falls Private Game Reserve, KwaZulu-Natal, South Africa | MT453116 | MT460613 | MT482413 | MT460581 | MT460638 | NA |
P. cf. frontalis |
|
Farm Omandumba, Erongo, Namibia | MT453117 | MT460614 | NA | NA | MT460639 | NA |
P. cf. frontalis | PEM R17996 | Espinheira, Namibe, Angola | MT453118 | MT460615 | MT482414 | MT460582 | MT460640 | MT460599 |
P. cf. frontalis |
|
Hobatere Lodge, Namibia | MT453119 | NA | NA | NA | MT460641 | NA |
P. frontalis |
|
Farm Oas, Karas, Namibia | MT453120 | MT460616 | NA | NA | NA | NA |
P. frontalis |
|
Geister Schlucht, Klein Aus Vista, Karas, Namibia | MT453121 | MT460617 | KR814693 | KR814680 | MT460642 | |
P. greigerti | E 107.19 | NA | JF340124 | NA | NA | NA | NA | NA |
P. greigerti | E 124.1 | NA | JF340125 | NA | NA | NA | NA | NA |
P. greigerti | UTEP 22161 | Pian Upe Wildlife Reserve, Hyena Hill, Northern Region, Uganda | NA | MT460632 | NA | MT460595 | MT460654 | NA |
P. janii | JM 1045 | KwaZulu-Natal, South Africa | MT453122 | MT460618 | MT482415 | NA | MT460643 | NA |
P. janii |
|
KwaZulu-Natal, South Africa | MT453123 | NA | NA | NA | NA | NA |
P. janii | AMB (SNH8) | KwaZulu-Natal, South Africa | MT453124 | MT460620 | MT482417 | MT460583 | MT460644 | MT460601 |
P. janii | PEM R12072 | Madlangula, Kosi Bay Nature Reserve, KwaZulu-Natal, South Africa | FJ404222 | NA | FJ404319 | FJ404293 | NA | NA |
P. janii | PEM R17372 | uMkhuze, Greater St. Lucia Wetland Park, KwaZulu-Natal, South Africa | NA | MT460619 | MT482416 | NA | NA | MT460600 |
P. lineata |
|
7.5 km E of Musina on Tishipe Rd., Limpopo, South Africa | MT453126 | MT460622 | MT482419 | MT460585 | MT460646 | MT460602 |
P. lineata | JM 1816 | Khamai, Limpopo, South Africa | MT453127 | MT460623 | NA | MT460586 | MT460647 | NA |
P. lineata | MBUR 394 | Makgabeng area, Limpopo, South Africa | MT453128 | MT460624 | MT482420 | NA | NA | MT460603 |
P. lineata | AMB (53F8) | Blouberg, Limpopo, South Africa | MT453125 | MT460621 | MT482418 | MT460584 | MT460645 | NA |
P. meleagris | E 107.22 | NA | JF340122 | NA | NA | NA | NA | NA |
P. meleagris | E 113.2 | NA | JF340123 | NA | NA | NA | NA | NA |
P. meleagris | MVZ245380 | Shai Hills, Greater Accra Region, Ghana | MT453135 | MT460631 | NA | MT460594 | MT460653 | NA |
P. ruspolii | CMRK316 | Tanzania | NA | NA | DQ486347 | DQ486171 | NA | NA |
P. stuhlmanni | LHM-000270 | 3.2 km W of Lesheba Wilderness Reserve, Limpopo, South Africa | NA | MT460625 | MT482421 | MT460587 | NA | NA |
P. stuhlmanni | PEM R17402 | Mkhuze Game Reserve, KwaZulu-Natal, South Africa | MT453129 | MT460626 | MT482422 | MT460588 | MT460648 | MT460604 |
P. sundevalli |
|
Farm Newstead, Eastern Cape, South Africa | MT453130 | MT460627 | MT482423 | MT460589 | MT460649 | MT460605 |
P. sundevalli |
|
23.9 km NE Vaalwater on Rd. to Melkrivier, Limpopo, South Africa | MT453131 | MT460628 | MT482424 | MT460590 | MT460650 | MT460606 |
P. visseri |
|
Opuwo Dist. ca 2 km N of Sesfontein, Kunene Region, Namibia | MT453132 | MT460629 | MT482425 | MT460591 | MT460651 | MT460607 |
P. visseri | PEM R17994 | Espinheira, Namibe, Angola | MT453133 | MT460630 | MT482426 | MT460592 | MT460652 | MT460608 |
P. visseri | MG 302 | Farm Kaross, Kunene Region, Namibia | MT453134 | NA | MT482427 | MT460593 | NA | MT460609 |
Outgroup | ||||||||
Psammophis condanarus | NA | NA | Z46479 | AY058991 | AF471075 | AF471104 | NA | NA |
Pseudaspis cana | NA | NA | AY611898 | AY058992 | AY612080 | AY611989 | NA | NA |
Aparallactus werneri | NA | NA | AY188045 | NA | AF471035 | AF471116 | NA | JN881241 |
Atractaspis corpulenta | NA | NA | AY611837 | NA | AY612020 | AY611929 | NA | JN881242 |
Boaedon fuliginosus | NA | NA | KX249802 | NA | KM519712 | AF544686 | KM519725 | JN881267 |
Buhoma procterae | NA | NA | AY611818 | NA | AY612001 | AY611910 | NA | NA |
Lampropeltis getula | NA | NA | KX694649 | MG672874 | MG672798 | KX694811 | MG673016 | JN881266 |
Leioheterodon madagascariensis | NA | NA | AY188061 | AY059010 | AY188022 | AF544685 | NA | NA |
Naja kaouthia | NA | NA | KX277260 | AY059008 | AF217835 | AY058938 | JF412633 | JN881273 |
Oxyrhabdium leporinum | NA | NA | AF471029 | DQ112081 | NA | NA |
High Resolution X-ray Computed Tomography (HRCT) parameters used to scan Prosymna skulls.
Species | Catalogue Number | Voxel (mm) | Voltage (kV) | Current (μA) | Exposure Time (secs) | MorphoSource |
---|---|---|---|---|---|---|
Prosymna angolensis |
|
0.00499991 | 60 | 300 | 0.5 | https://doi.org/10.17602/M2/M435305 |
Prosymna confusa sp. nov. | PEM R24013 | 0.00799991 | 90 | 100 | 0.5 | https://doi.org/10.17602/M2/M435274 |
Prosymna lisima sp. nov. | PEM R23512 | 0.00699991 | 60 | 300 | 0.5 | https://doi.org/10.17602/M2/M435310 |
Prosymna lisima sp. nov. | PEM R23510 | 0.00699991 | 60 | 300 | 0.5 | https://doi.org/10.17602/M2/M435343 |
Prosymna cf. frontalis | PEM R17997 | 0.00699991 | 100 | 80 | 0.5 | https://doi.org/10.17602/M2/M435295 |
Prosymna janii | PEM R08679 | 0.00699991 | 90 | 80 | 0.5 | https://doi.org/10.17602/M2/M435300 |