Research Article |
Corresponding author: Anh D. Nguyen ( ducanh410@yahoo.com ) Academic editor: Didier Vanden Spiegel
© 2022 Anh D. Nguyen, Katsuyuki Eguchi.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Nguyen AD, Eguchi K (2022) Mountainous millipedes in Vietnam. II. A conspicuous Tylopus species from Northern Vietnam (Diplopoda, Polydesmida, Paradoxosomatidae). ZooKeys 1091: 1-13. https://doi.org/10.3897/zookeys.1091.80094
|
A conspicuous Tylopus species is described from Northern Vietnam, namely T. helicorthomorphoides sp. nov. The new species is clearly diagnosed by the gonopodal solenophore completely sheathing the solenomere, both being coiled three times, and the absence of spine z and process h of the gonopod. Fragments of the COI and 16S rRNA genes were extracted, and the phylogenetic analysis also supports the new species.
Biodiversity, COI, 16S rRNA, mountain fauna, taxonomy
The genus Tylopus was established by
Tylopus is considered the most species-rich genus within the family Paradoxosomatidae Daday, 1889. Currently, it contains 77 species (
As a continuation of our contributions to the millipede fauna of mountainous regions of Vietnam, this work aims to describe a conspicuous Tylopus species from northern Vietnam and to discuss relationships between Vietnamese Tylopus species.
Material was collected from two localities in Northern Vietnam, Tam Dao National Park and Bac Me Natural Reserve (Fig.
Total DNA was extracted from several midbody legs using the QIAGEN DNeasy Blood & Tissue Kit. Fragments of the mitochondrial cytochrome c oxidase subunit I (COI) and 16S rRNA genes were amplified using two pairs of primers: COI-1F (5’-ACTCTACTAATCATAAGGAT-3’) and COI-1R (5’-TAAACCTCCGGGTGACCAA-3’), 16S-1F (5’-CCGGTTTGAACTCAGATCA-3’) and 16S-1R (5’-TGACTGTTTAGCAAAGACAT-3’). The amplification protocol followed a previously published method by
All confirmed sequences were aligned using Cluster X ver.2.0 (
The nucleotide frequencies were statistically calculated using MEGA X. The final dataset contains 956 bp, including 586 bp of the COI gene and 370 bp of the 16S rRNA gene. It has nucleotide frequencies of 26.1, 38.3, 17.5, and 18.0 for A, T, G, and C, respectively. The GC content accounts for 35.5% of total nucleotides. The dataset has 324 parsimony-informative and 403 variable sites.
The phylogenetic tree was reconstructed using the Maximum Likelihood (ML) analysis with the best model resulting the ModelFinder (
All specimens, including holotype and paratypes and DNA vouchers, have been deposited in the Department of Soil Ecology, Institute of Ecology and Biological Resources (IEBR), Vietnam Academy of Science and Technology, Hanoi, Vietnam. A total of 24 new sequences were deposited in GenBank, with accession numbers as presented in Table
Analyzed species, locality data, deposition voucher numbers, and GenBank accession numbers. Accession numbers in bold font are new sequences.
No | Species | Locality | Voucher | 16S rRNA | COI |
---|---|---|---|---|---|
1 | Tylopus crassipes Golovatch, 1984 | Sapa, Lao Cai | IEBR- Myr 92 | OM978927 | KX096920 |
2 | Tylopus hilaroides Golovatch, 1984 | Cuc Phuong, Ninh Binh | IEBR- Myr 543 | OM978921 | MW384914 |
3 | Tylopus hilaroides Golovatch, 1984 | Cuc Phuong, Ninh Binh | IEBR- Myr 198 | KX755588 | MW384918 |
4 | Tylopus hilaroides Golovatch, 1984 | Cuc Phuong, Ninh Binh | SVE- Myr 149 | OM978930 | MW384905 |
5 | Tylopus hilaroides Golovatch, 1984 | Cuc Phuong, Ninh Binh | SVE- Myr 173 | OM978931 | MW384904 |
6 | Tylopus hilaroides Golovatch, 1984 | Tam Dao, Vinh Phuc | SVE- Myr 55 | OM978932 | MW384903 |
7 | Tylopus nodulipes (Attems, 1953) | Huong Son, Ha Tinh | IEBR- Myr 105 | OM978913 | MW384919 |
8 | Tylopus nodulipes (Attems, 1953) | Minh Hoa, Quang Binh | IEBR- Myr 557 | OM978924 | MW384912 |
9 | Tylopus roseiparaterga Nguyen, 2012 | Ba Vi, Ha Noi | SVE- Myr 70 | OM978933 | MW384902 |
10 | Tylopus sapaensis Nguyen, 2012 | Sa Pa, Lao Cai | IEBR- Myr 93 | OM978928 | MW384908 |
11 | Tylopus spinisternus Nguyen, 2012 | Bi Doup – Nui Ba, Lam Dong | IEBR- Myr 234 | OM978915 | MW384916 |
12 | Tylopus sp.1 | Ba Vi, Ha Noi | SVE- Myr 73 | OM978934 | MW384901 |
13 | Tylopus sp.1 | Ba Vi, Ha Noi | SVE- Myr 74 | OM978935 | MW384900 |
14 | Tylopus sp.2 | Phong Nha – Ke Bang, Quang Binh | IEBR- Myr 210 | OM978914 | MW384917 |
15 | Tylopus sp.2 | Phong Nha – Ke Bang, Quang Binh | IEBR- Myr IPE6 | OM978929 | MW384907 |
16 | Tylopus sp.3 | Sa Pa, Lao Cai | IEBR- Myr 556 | OM978923 | MW384913 |
17 | Tylopus sp.4 | Son Dong, Bac Giang | IEBR- Myr 509 | OM978919 | MW384915 |
18 | Tylopus helicorthomorphoides sp.nov. | Tam Dao, Vinh Phuc | IEBR- Myr 603 | OM978925 | MW384910 |
19 | Tylopus sp.7 | Muong Nhe, Dien Bien | IEBR- Myr 617 | OM978926 | MW384909 |
20 | Oxidus gigas (Attems, 1953) | Sapa, Lao Cai | IEBR-Myr 113 | KX755581 | KX096921 |
21 | Oxidus gigas (Attems, 1953) | Duc Xuan, Ha Giang | IEBR-Myr 516 | OM978920 | KX096928 |
22 | Oxidus riukiaria (Verhoeff, 1940) | Ryukyu, Japan | IEBR-H500 | OM978918 | KX096926 |
23 | Oxidus riukiaria (Verhoeff, 1940) | Ryukyu, Japan | IEBR-H500J | KX755583 | KX096927 |
24 | Oxidus gracilis (C.L. Koch, 1847) | Taiwan | IEBR- Myr 549 | OM978922 | KX096931 |
25 | Oxidus gracilis (C.L. Koch, 1847) | Ryukyu, Japan | IEBR- Myr 466 | OM978916 | KX096924 |
26 | Oxidus gracilis (C.L. Koch, 1847) | Ryukyu, Japan | IEBR- Myr 471 | OM978917 | KX096925 |
27 | Oxidus gracilis (C.L. Koch, 1847) | USA | IEBR-Myr USA | KX096919 | KX096931 |
28 | Sellanucheza grandis (Golovatch, 1984) | Xuan Son, Phu Tho | IEBR-Myr 177 | KX755584 | KR818296 |
29 | Sellanucheza hoffmani Nguyen, 2011 | Phong Nha – Ke Bang, Quang Binh | IEBR- Myr 182 | KX755585 | KR81829 |
30 | Sellanucheza variata (Attems, 1953) | Duc Xuan, Ha Giang | IEBR- Myr 515 | KX755586 | OM919709 |
Antheromorpha pumatensis Nguyen, 2018 | Pu Mat, Nghe An | IEBR- Myr IPE3 | MG669559 | MG669372 |
Family Paradoxosomatidae Daday, 1889
Holotype. Vietnam • 1 male; Vinh Phuc Province, Tam Dao National Park, on the way to Tam Dao 2; 1,100 m a.s.l.; 25 Feb. 2017; Anh D. Nguyen leg.; natural forests; IEBR-Myr 603H.
Paratypes. Vietnam • 2 females; same data as for holotype; IEBR-Myr 603P • 1 male; Vinh Phuc Province, Tam Dao National Park, on way to TV tower; 21.46065°N, 105.64863°E; 1,081 m a.s.l.; 10 Dec. 2019; Hoang Quang Duy leg.; natural forests; IEBR-Myr 876.
Non-type. Vietnam • 1 male; Ha Giang Province, Bac Me Natural Reserve, Minh Ngoc commune, Lung Can village; 22.71814°N, 105.17997°E; 361 m a.s.l.; 12–13 Dec. 2018; Anh D. Nguyen leg.; bushes (IEBR-Myr 809).
The new species distinctly differs from its congeners in having a three-times spiraled solenophore of the gonopods and postfemoral lamella l present while spine z and process h totally absent. The new species is slightly similar to its congener T. strongylomoides (Korsórs & Golovatch, 1989), from the same locality (Tam Dao National Park), in having a twisted solenophore and solenomere. However, the new species obviously differs from T. strongylosomoides in having a more strongly coiled solenophore and solenomere (3× vs 1.5×).
Regarding the gonopod conformation, the new species is somewhat similar to species of the genus Helicorthomorpha in the twist of both the solenophore and solenomere. However, the postfemoral region of Helicorthomorpha members is more elaborate, twisted, and carries no additional processes, whereas that of the new species is spiraled or coiled rather than twisted, and has a postfemoral lamella.
The species epithet, helicorthomorphoides, is used to emphasize the similarity of the gonopod solenophore between the new species and those of the genus Helicorthomorpha.
Body length ~ 14.4 mm (male) and 14.9 mm (female). Width of midbody pro- and metazona ~ 1.2 mm (male), 1.6 mm (female) and 1.6 mm (male), 1.9 mm (female), respectively.
Body generally brownish yellow or darkish yellow except antennomere 7 and metaterga with a darker, median, V-shaped region (or median triangular-shaped area on metaterga) (Figs
Head (Fig.
Collum (Fig.
Body segments 3<4<2=5–17, thereafter gradually tapering towards telson. Prozonae and metazonae clearly divided by deep, striated waists. Prozonae smooth, shining, yellowish brown, with a median, broad, longitudinal yellow stria (Figs
Metatergal sulcus starting on segment 4 but clearly present from segment 5, nearly reaching base of paraterga (Fig.
Paraterga (Figs
Ozopores located inside round hollows at the caudolateral sides of paraterga 5, 7, 9, 10, 12, 13, and 15–19 (Figs
Pleurites (Figs
Telson
(Figs
Sterna.
Cross impression distinct. Sternum 5 with a large rectangular lamina between coxae 4 (Fig.
Leg short, ~ 1.5× as long as midbody height. Prefemora swollen dorsally. Tarsal brushes present till legs 21, then gradually thinner and absent on subsequent legs. Adenostyles present on postfemora and tibiae, each with a small knob/tubercle (Fig.
Gonopod suberect, simple (Figs
The COI Kimura 2-Parameter (K2P) distance between the new species and other Tylopus species was reported in
The twenty included samples of Tylopus members were divided into two different lineages (Fig.
The second lineage, Tylopus II, was clearly separated from the clade Oxidus + Tylopus I with high bootstrap support (97%). The new species, T. helicorthomorphoides sp. nov., was positioned in this lineage and is closely related to Tylopus sp. 4 (IEBR-Myr 509), but with low bootstrap support (49%). In addition, the relationship between Tylopus species in the second lineage was very poorly supported (bootstrap less than 70%), except the clade T. crassipes + T. roseiparaterga, with a bootstrap value of 90%.
Both
The genus Tylopus is, phylogenetically, divided into two clades as reported above. This also agrees with the results presented by
The genus Tylopus has been found in both lower and higher lands in northern Vietnam, but it has only been recorded in higher lands in southern Vietnam, and has never been found in the Mekong delta (
With the new species described herein, the number of Tylopus species known for Vietnam increases to 22. However, this number is still far from representing the true diversity of the genus in Vietnam. More intensive surveys will reveal more new discoveries, especially in the diverse high mountainous regions of Vietnam, which remain underexplored.
This research was funded by the Vietnam National Foundation for Science and Technology Development (NAFOSTED), under grant number 106.05-2019.320 to Anh D. Nguyen. The work was also supported by the Tokyo Metropolitan University Fund for TMU Strategic Research (Leader: Prof. Noriaki Murakami; FY2020-FY2022).
The COI-16S rRNA dataset
Data type: DNA data
Explanation note: The COI-16S rRNA dataset contains 956 bp, including 586 bp of the COI gene and 370 bp of the 16S rRNA gene.