Research Article |
Corresponding author: Giovanni Chimienti ( giovanni.chimienti@uniba.it ) Academic editor: James Reimer
© 2022 Giovanni Chimienti, Tullia Isotta Terraneo, Silvia Vicario, Fabio Marchese, Sam J. Purkis, Ameer Abdulla Eweida, Mattie Rodrigue, Francesca Benzoni.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Chimienti G, Terraneo TI, Vicario S, Marchese F, Purkis SJ, Abdulla Eweida A, Rodrigue M, Benzoni F (2022) A new species of Bathypathes (Cnidaria, Anthozoa, Antipatharia, Schizopathidae) from the Red Sea and its phylogenetic position. ZooKeys 1116: 1-22. https://doi.org/10.3897/zookeys.1116.79846
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A black coral, Bathypathes thermophila Chimienti, sp. nov. is described from the Saudi Arabian coasts of the Gulf of Aqaba and north Red Sea (Neom area) using an integrated taxonomic approach. The morphological distinctiveness of the new species is confirmed by molecular analyses. The species thrives in warm and high salinity waters typical of the Red Sea at bathyal depths. It can form colony aggregations on muddy bottoms with scattered, small hard substrates. Colonies are monopodial, feather-like, and attached to a hard substrate through a thorny basal plate. Pinnules are simple, arranged biserially and alternately, and all the same length (up to approximately 20 cm) except for few, proximal ones. Spines are triangular, laterally compressed, subequal, smooth, and simple or rarely bifurcated. Polyps are elongated transversely, 1.5–2.0 mm in transverse diameter. Large colonies can have one or few branches, whose origin is discussed. The phylogenetic position of B. thermophila sp. nov. within the order Antipatharia, recovered using three mitochondrial markers, shows that it is nested within the family Schizopathidae. It is close to species in the genera Parantipathes, Lillipathes, Alternatipathes, and Umbellapathes rather than to the other available representatives of the genus Bathypathes, as currently defined based on morphology. In agreement with previous findings, our results question the evolutionary significance of morphological characters traditionally used to discriminate Antipatharia at higher taxonomic level.
Black corals, cox1-cox3, deep sea, igrN, igrW, Neom, Saudi Arabia
Black corals (Cnidaria, Anthozoa, Antipatharia) are ubiquitous to the world’s ocean, spanning cold deep to shallow tropical reefs. Traditionally, their description and classification rely on morphological traits, such as the corallum growth form, polyps shape and distribution, number of mesenteries, and size, shape and ornamentation of the skeletal spines (e.g.,
Within the family Schizopathidae, the genus Bathypathes Brook, 1889 includes monopodial black corals and currently accounts for 14 valid species (
The Red Sea rift is a young ocean basin (
This study reports the description of a new species of Bathypathes found at bathyal depths in the highly saline and warm waters of the Red Sea, representing the first record for the family Schizopathidae in the basin. In particular, B. thermophila sp. nov. from the Neom area is described based on traditional morphological characters, and its phylogenetic position within the order Antipatharia is inferred genetically using three mitochondrial loci and including available representatives of all the seven Antipatharia families. This study demonstrates that (a) B. thermophila sp. nov. is a new species of Schizopathidae commonly present in the bathyal zone of the Red Sea; (b) black coral diversity in the basin is still poorly known and species new to taxonomy are likely to occur; and (c) traditional morphological characters used to describe genera and species in the order might be subject to convergent evolution and the taxonomy of the order is in need of revision.
A series of mesophotic and deep-sea explorations were carried out in the Neom area, on the Saudi Arabia coast of the Gulf of Aqaba and northern Red Sea (Fig.
Map of the study area showing the known occurrences of Bathypathes thermophila sp. nov. Black dots: observed colonies during the 2020 OceanX-Neom Red Sea Expedition; red dots: sampled colonies; triangles: photographic record by
Images of living corals were taken in situ with the cameras mounted on the ROV and/or the submersibles. Five colonies were collected at four different localities (Fig.
Type material is deposited at the
National Museum of Natural History (
Total genomic DNA was extracted using the DNeasy Blood and Tissue Kit (Qiagen Inc., Hilden, Germany) following the manufacturer’s protocol. DNA quality and quantity was assessed using a NanoDrop 2000 C spectrophotometer (Thermo Fisher Scientific, Wilmington, USA), and polymerase chain reaction (PCR) was used to amplify three genetic markers. In particular, the mitochondrial igrN was amplified with the ND5-51anti10725F-ND1anti11217R primers and the igrW with TRPntiF-ND2anti1040R, following
Sequences of the genus Leiopathes Haime, 1849, representative of Leiopathidae Haeckel, 1896, were downloaded from GenBank and used as outgroup in all phylogenetic reconstructions because of its confirmed sister position to the other families of antipatharians (
Order Antipatharia
Family Schizopathidae Brook, 1889
Holotype
:
Bathypathes thermophila sp. nov., holotype (
Colony attached though a basal disk, monopodial, generally unbranched or with a few, random branches, and pinnulate (Figs
Branching and damages in Bathypathes thermophila sp. nov. a example of a colony in situ with different branches. Holotype (
Spines on the pinnules smooth, laterally compressed, triangular, acute, simple or rarely bifurcated, 0.015–0.025 mm tall (occasionally down to 0.008 mm or up to 0.028 mm), with polypar spines almost the same size of abpolypar ones or slightly larger. Four or five rows of spines in lateral view, each row bearing from one to three spines (Fig.
Scanning Electron Microscope of the spines of Bathypathes thermophila sp. nov.,
Spines on the stem smooth, laterally compressed, triangular in profile, acute, simple and enlarged at the base, 0.020–0.030 mm tall. Spines uniformly distributed around the stem, arranged in 10–14 longitudinal rows, each one bearing one to three parallel spines (Fig.
Polyps present on one side on both pinnules and stem (Fig.
The holotype (
The stem is characterised by six or seven rows of spines in lateral view, although in some areas their distribution can be irregular. A single, 4-cm branch is present in the proximal area of the corallum, and a dichotomous ramification is present in the median area (Fig.
Pinnular spines are small, from 0.017 to 0.022 mm tall, and 0.20–0.31 mm apart. Spines can be double or triple, particularly in the proximal portion of pinnules. Bifurcated spines are also present, although not common.
The polyps are 1.5–2.0 mm in transverse diameter, rarely smaller than 1.5 mm. Polyps density is 11–15 polyps per 3 cm on the stem and 11–13 polyps per 3 cm on the pinnules.
The general morphology of the four paratypes analysed is similar to that of the holotype, with a monopodial corallum and pinnules simple, bilateral and arranged alternately. All paratypes have elongated polyps occurring in a single series on one side of the pinnules and of the stem.
Paratype KAUST-NTN0037-8 is a complete colony of 27 cm in length (Fig.
Paratypes of Bathypathes thermophila sp. nov. KAUST-NTN0037-8 a colony in situ, on a muddy bottom with scattered biogenic hard substrate b dry colony in frontal view (polypar side) and in c lateral view d polyp e spines on a proximal pinnule. MUZAC-6665 f colony in situ on muddy bottom g dry colony in frontal view h distal polyps i proximal spines on a pinnule from the lower part of the corallum. MUZAC-6666 j colony in situ on a hard ground, with a spider crab as epibiont k polyps on pinnule l spines arrangement on pinnule form the upper part of the corallum m base of the colony. Upper side of horizontal skeletal elements is the polypar side. Scale bars: 10 cm (a, f, g, j); 1 cm (b, c); 1 mm (d, h, k, m); 100 µm (e, i, l).
Paratype MUZAC-6665 is a complete colony of 45 cm in length (Fig.
Paratype MUZAC-6666 is a complete colony of 14 cm in length (Fig.
Paratype KAUST-NTN0056-3 is a complete colony 26 cm long, with a stem basal diameter of 0.9 mm. The unpinnulated stalk is 3.0 cm long, while the basal disk is 2.7 mm in diameter with tall spines, erect or curved upwards, up to 0.9 mm tall. Pinnules up to 11 cm long with a basal diameter of 0.18–0.26 mm and a pinnular density of 14–17 per 3 cm. Pinnules are alternate, with adjacent ones spaced 3.2–4.3 mm, except for one, single pair of pinnules present on the same side of the stem, in the median part of the colony. The central axial canal is 0.07 mm in diameter on a pinnule 0.12 mm in diameter. Pinnules with four rows of spines in lateral view, mostly 0.008–0.012 mm tall (some up to 0.018 mm) and 0.10–0.18 mm apart. Stem bearing five rows of spines in lateral view, 0.016–0.020 mm tall. The colony was found dead, without polyps.
The species name is derived from the Greek words thermos (hot) and philia (love, preference for), referring to the occurrence of this species in the rather warm Red Sea waters, especially compared to the water temperatures usually measured in other bodies of water within the same depth range.
A colony matching the macro-morphology of B. thermophila sp. nov. is shown in
Bathypathes thermophila sp. nov. seems to grow preferentially on scattered hard substrates (e.g., rocks, fresh, fossil or subfossil shells, coral rubble, and subfossil sea urchin tests) surrounded by mud, although it can occur also on rocky bottoms. The holotype (
Water temperature on the seabed was 22 °C, as also reported off Duba by
Within the genus Bathypathes, B. platycaulus Totton, 1923 and B. pseudoalternata Molodtsova, Opresko and Wagner 2022 show alternate subpinnules. The former is characterised by a peculiar broadening of the stem in the middle region, to which the species name refers (
Bathypathes thermophila sp. nov. differs from B. pseudoalternata in having a colony which can bear one or a few branches (vs unbranched), higher pinnular density (12–20 vs. 6–12 pinnules per 3 cm), shorter pinnular spines (0.008–0.028 vs 0.030–0.080 mm) with higher density (5–8 vs. 4–5 spines per mm), smaller polyps (1.5–2.5 vs. 3–5 mm in transverse diameter), and higher density of polyps (10–15 vs. 6–7.5 polyps per 3 cm).
Large colonies, approximately higher than 40 cm, can show one or few ramifications (Fig.
A total of four sequences were obtained and analysed for the mitochondrial igrN and igrW, and cox3-cox1 region. The final igrN alignment consisted of 612 bp, with 60 polymorphic sites, 56 parsimony informative sites, and 72 mutations. The igrW alignment consisted of 623 bp, with 93 polymorphic and 69 parsimony-informative sites, and 114 mutations, while the alignment of the cox3-cox1 was 820 bp long (199 polymorphic and 174 parsimony informative sites, and a total of 250 mutations).
The igrN and igrW ML topologies are shown in Fig.
RAxML phylogenetic reconstruction of Antipatharia and the position of Bathypathes thermophila sp. nov. (in purple) inferred from two molecular loci a the mitochondrial intergenic spacer between nad5-igr-nad1 and b the mitochondrial intergenic spacer between trnW-igr-nad2. Node values are maximum likelihood bootstrap values (> 70%). The genus Leiopathes was selected as outgroup. Sequences highlighted by (*) are representatives of the family Cladopathidae.
Within the Family Schizopathidae, species with a monopodial, unbranched corallum are ascribed to the genera Bathypathes, Schizopathes, Abyssopathes Opresko, 2002, Saropathes, Alternatipathes, and Parantipathes. Our specimens lack the triangular-shaped pinnulated section typical of Alternatipathes and Schizopathes, the latter also characterised by unattached colonies with a hook-like holdfast for support (
Based on morphological characters considered diagnostic in black coral taxonomy, we assigned the examined material to the genus Bathypathes and described it as a new species. From a molecular point of view, data from three loci, consistently and concordantly placed B. thermophila sp. nov. in a clade closely related to the genus Parantipathes rather than with the other available sequences of Bathypathes. This is relatively unsurprising as previous works already highlighted that the genus Bathypathes, as currently defined based on morphological characters, is polyphyletic. For example, rDNA phylogenetic reconstructions showed that Bathypathes, comprising representatives of the type species, B. patula, clusters with Stauropathes (
The overall ML analyses based on the three loci were mostly concordant and recovered a consistent reconstruction of the phylogenetic relationships within the order Antipatharia, in agreement with previously published molecular findings. The three mitochondrial phylogenetic reconstructions obtained consistently placed B. thermophila sp. nov. within a distinct molecular lineage including the sequences of all available representatives of the family Schizopathidae and one representative of the family Cladopathidae Kinoshita, 1910 (Sibopathes macrospina Opresko, 1993), with the exception of cox3-cox1 reconstruction, where no sequences of Sibopathes were available (Fig.
Antipatharians are currently largely understudied in the Red Sea, particularly in the mesophotic and aphotic zones. Due to the unique environmental features of this body of water, and its geographic position at the periphery of the greater Indo-Pacific region, a detailed study of Red Sea black corals can greatly contribute to our understanding of the evolution, phylogenetic relationships and biogeography of the whole group, ultimately pushing towards its pending taxonomic revision. Moreover, a reassessment of the morphological characters so far considered informative and diagnostic for black corals taxonomy is needed. In this respect, our molecular reconstructions and their comparison with the observed morphological features represent a first step in this direction and provide a baseline for future works. Future studies of Red Sea black corals will ultimately need to integrate nuclear and Next Generation Sequencing data. Indeed, molecular taxonomy is highlighting similar patterns at different taxonomic levels within the entire order Antipatharia and suggests that a molecular revolution similar to the one which has taken place in the last 20 years for other metazoans in general, and cnidarians in particular, is timely.
Bathypathes thermophila sp. nov. is described for the Neom region in the north Saudi Arabian Red Sea and represents the first black coral species described from the basin, the first record for the family Schizopathidae, as well as the only member of this family known thus far to live in relatively warm waters at certain depths. Considering the unique ecological and geological features of the Red Sea rift and the peculiar coral fauna that has adapted to live there, it is hardly surprising that the first systematic sampling effort to target black corals diversity and distribution led to the discovery of a new species. Indeed, as the study of the Neom reference collection proceeds, more taxa new to science are likely to be discovered. The study of their phylogenetic relationships and distribution, like in the case of Bathypathes thermophila sp. nov., will contribute to our knowledge of black corals and, ultimately, to a revision of their current taxonomic framework, increasingly exposed by molecular investigations to be plagued by polyphyly.
We warmly thank Neom, and in particular Thamer Habis, Razan Khamis, Peter Mackelworth, Paul Marshall, Justin Mynar, and Giacomo Palavacini for organising, coordinating, and facilitating the Red Sea Expedition in 2020. We would like to thank OceanX and the crew of OceanXplorer for their operational and logistical support for the duration of this expedition. In particular, we would like to acknowledge the ROV and Sub teams for data acquisition, sample collection and support of scientific operations on board OceanXplorer. We would also like to thank OceanX Media, for documenting and communicating this work with the public. We are grateful to Ivan Agerton, on behalf of OceanX Media, for photographs in Fig.
Table S1
Data type: Docx file.
Explanation note: Records of Bathypathes thermophila sp. nov. with indication of the dive and the relative gear (CHR: “Chimaera” ROV; NTN: “Neptune” submersible), the geographic coordinates, the depth and the number of colonies observed (N). When several colonies were observed within a transect, coordinates and depth refer to the shallowest and the deepest records.
Table S2
Data type: Docx file.
Explanation note: Metadata of the samples of Bathypathes thermophila sp. nov. considered in this study.
Figure S1
Data type: Jpg file.
Explanation note: RAxML phylogenetic reconstruction of Antipatharia and the position of Bathypathes thermophila sp. nov. (in purple) inferred with a cox3-cox1 reconstruction. Node values are maximum likelihood bootstrap values (> 70%). The genus Leiopathes was selected as outgroup. Some of the samples reported as Alternatipathes alternata are now doubtful with respect to the recently-described Bathypathes pseudoalternata.