Research Article |
Corresponding author: Chang-Bae Kim ( evodevo@smu.ac.kr ) Academic editor: Nathalie Yonow
© 2020 Thinh Dinh Do, Dae-Wui Jung, Hyun-Jong Kil, Chang-Bae Kim.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Do TD, Jung D-W, Kil H-J, Kim C-B (2020) A report of a new species and new record of Cadlina (Nudibranchia, Cadlinidae) from South Korea. ZooKeys 996: 1-18. https://doi.org/10.3897/zookeys.996.54602
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Of the four species in the genus Cadlina present in the northwestern Pacific region, C. japonica has been the only species recorded from South Korea. For the purpose of investigating Cadlina in Korean waters, specimens were collected from the Korean East Sea (Sea of Japan) by scuba diving. The radula and morphology of these specimens were examined by stereoscopic and scanning electron microscopy. Based on morphology, three species were identified in Korean waters, including the new species, Cadlina koreana sp. nov., C. umiushi (first record in South Korea), and C. japonica. Cadlina koreana sp. nov. somewhat resembles C. umiushi but differs in both its morphology as well as the structure of its radula. The background color of Cadlina koreana sp. nov. is translucent white, tubercles on the dorsum are opaque white and the yellow marginal band is absent. The radular formula of Cadlina koreana sp. nov. is 57 × 23.1.23 with a rectangular rachidian tooth. In addition, mitochondrial cytochrome c subunit 1 (COI), 16S ribosomal RNA (16S rRNA), and nuclear 28S ribosomal RNA (28S rRNA) gene sequences were generated and used for analysis of Automatic Barcode Gap Discovery (ABGD) and reconstruction of the phylogenetic tree. Morphological distinction and genetic analyses confirm that three Cadlina species are present in Korean waters of which Cadlina koreana is a new species.
Cadlina koreana sp. nov., description, northwestern Pacific region, morphology, phylogeny
Cadlina Bergh, 1879 is a genus of slow-moving and flattened dorid nudibranchs (
Members of the nudibranch genus Cadlina generally have similar body shapes and coloration so it is a difficult task to distinguish them based on their morphology (
This study aimed to investigate Cadlina species in Korean waters. For this purpose, eight specimens were collected for species identification. In addition, fragments of COI, 16S rRNA, and 28S rRNA genes from these specimens were sequenced and analyzed to compare with the morphological examinations.
Cadlina species were collected from the Korean East Sea (Sea of Japan) by scuba diving. Upon collection, specimens were preserved in 10% neutral buffered formalin for morphological examination. In addition, small sample of tissue from the foot was stored in 95% ethanol for DNA extraction. Sample collection data and depositories are presented in Suppl. material
Total DNA was extracted from the foot of each specimen using E.Z.N.A. Mollusc DNA Kit (Omega Bio-tek, USA). The quality and concentration of the extracted DNA were checked using a MaestroNano spectrophotometer (Maestrogen, Taiwan). Polymerase chain reaction (PCR) analysis was performed for two mitochondrial markers (COI and 16S rRNA) and one nuclear marker (28S rRNA). The primer set for each marker is listed in Table
Primer | Gene | Sequence (5’-3’) genes | Annealing temperature | Reference |
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LCO1490 | COI | GGTCAACAAATCATAAAGATATTGG | 45° |
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HCO2198 | TAAACTTCAGGGTGACCAAAAAATCA | |||
16Sar-L | 16S rRNA | CGCCTGTTTATCAAAAACAT | 48° |
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16S R | CCGRTYTGAACTCAGCTCACG |
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28S C1 | 28S rRNA | ACCCGCTGAATTTAAGCAT | 48° |
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28S C2 | TGAACTCTCTCTTCAAAGTTCTTTTC |
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The 20 μl PCR reaction mixture contained 10 μl of 2X TOPsimple DyeMIX-Tenuto (Enzynomics, South Korea), 1 μl of each primer (10 pmoles/μl), 100 ng of DNA, and distilled water. The amplification protocol was as follows: initial denaturation at 95 °C for 5 minutes, followed by 35 cycles of denaturation at 95 °C for 45 seconds, variable annealing temperature for each primer set as listed in Table
Consensus sequences were generated from the forward and reverse sequences with Geneious software version 9.1.8 (
Phylogenetic reconstruction of Cadlina species was conducted based on the concatenation of three markers (COI, 16S rRNA, and 28S rRNA) or two markers (COI and 16S rRNA) because there were no 28S rRNA sequences for some species. Two species of the genus Aldisa, A. sanguinea and A. smaragdina, in the family Cadlinidae were used as the outgroup. Before concatenation, each marker was aligned using the ClustalW method in MEGA X software (
Holotype. NIBRIV0000865970; South Korea, Gangwon-do, Goseong-gun, Jugwang-myeon, Munamjin-ri; 38°18'14.75"N, 128°34'1.05"E; collected on 02 June 2013 (COI GenBank number: MT420429). Paratype. NIBRIV0000865971; South Korea, Gangwon-do, Goseong-gun, Jugwang-myeon, Munamjin-ri; 38°18'14.75"N, 128°34'1.05"E; collected on 02 June 2013 (COI GenBank number: MT420430).
Voucher: SMU00051; South Korea, Gangwon-do, Goseong-gun, Jugwang-myeon, Munamjin-ri; 38°18'14.75"N, 128°34'1.05"E; collected on 02 June 2013 (COI GenBank number: MT420431).
Ground color translucent white (Fig.
Body elongated ovate; body lengths 10.3 mm (holotype), 14 mm (paratype), and 9 mm (additional specimen). Ground color translucent white (Fig.
A comparison of Cadlina species recorded in the northwestern Pacific region is presented in Table
Morphological comparison among Cadlina species in the northwestern Pacific region.
Species | Locality | Size | Morphology | Radular formula | Rachidian tooth | First lateral teeth | Mid-lateral teeth | Outer lateral teeth | Ampulla | Vas deferens | Vagina | Bursa copulatrix and receptaculum seminis | Source of information |
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Cadlina koreana | Munamjin-ri, South Korea | 9–14 mm | Translucent white; dorsum covered with small white tubercles; small white specs present on mantle edge. No yellow marginal band | 57 × 23.1.23 | Rectangular, hook-shaped, 2 longer central denticles, and 2 shorter lateral denticles | 1 cusp, 2 short inner denticles, and 3–4 outer denticles. | Hamate, comb-shaped, up to 7 denticles | Hamate, comb-shaped, 5–7 denticles. | Moderate and convoluted | Long and narrow | Relatively long and narrow | Ovate and ca. 1.5 × larger than receptaculum seminis | This study |
Cadlina umiushi | Munamjin-ri, South Korea | 8–9 mm | White background; numerous small yellow tubercles; yellow marginal band | 55 x 16.1.16 | Trapezoid, hook-shaped, 2 central denticles, and 2 lateral denticles | 1 cusp, 2 inner denticles, and 3 outer denticles | Hamate, rather comb-shaped, 6–8 distinct outer denticles. | Hamate to straight, up to 10 inconspicuous denticles | Long and convoluted | Relatively short | Relatively short and broad | Ovate and ca. 2 × larger than receptaculum seminis | This study |
Cadlina japonica | Munamjin-ri and Yeonji-ri, South Korea | 48–55 mm | Yellowish with dark brown patches; small scattered yellow spots; yellow marginal band | 88 x 71.1.71 | Elongate, 2–4 lobe-like denticles | 1 bigger cusp, 3–4 inner denticles, and 4–6 outer denticles | Hook-shaped, no inner denticle and 3–5 outer denticles | Hook-shaped, bearing up to 6 denticles | Moderate and convoluted | Long, narrow and distinct | Relatively short and narrow | Almost rectangular in shape, ca. 5 × larger than receptaculum seminis | This study |
Cadlina kamchatica | Kamchatka, Starichkov Island, Russia | 37 mm | Creamy to dark yellow/light brown; small, low rounded yellow tubercles | 82 × 35.1.35 | Moderately high, trapezoid, 5–6 denticles, 2 middle usually larger than outer ones | 1 cusp, 4–6 large inner denticles, 5–6 distinct outer denticles | Hamate, comb-shaped, up to 17 distinct outer denticles only | Hamate reduced, up to 19 sharp denticles | Long and convoluted | Relatively short | Long and narrow | Pear-shaped, 2 × larger than receptaculum seminis |
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Cadlina paninae | Matua Islands, Middle Kurile Islands, Russia | 29 mm | Opaque whitish, sometimes with some yellowish shadow; low indistinct tubercles | 90 × 38.1.38 | Low rectangular, 3–5 distinct cusps, often bifurcated at tips | 1 cusp, 2–3 inner denticles and 3–4 outer denticles | Elongate hook-shaped, up to 20 comb-shaped denticles | Hook-shaped, up to 20 comb-shaped denticles | Relatively short and slightly convoluted | Long and narrow | Long and narrow | Ovate, 1.5 × larger than receptaculum seminis |
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The external morphology of Cadlina koreana is relatively similar to C. umiushi, which also has small-sized tubercles on the dorsum. However, clear differences between these two species can be observed by comparing their coloration. The color pattern of Cadlina koreana is white without yellow tubercles or a yellow marginal band. In contrast, C. umiushi is semi-transparent white with yellow tubercles and a yellow marginal band. The rachidian tooth of Cadlina koreana is rectangular while it is trapezoid in C. umiushi. The inner denticles of the first lateral tooth of C. umiushi are half the length of the tooth body, but in Cadlina koreana it is less than half the length of the tooth body. Moreover, the outer lateral teeth of Cadlina koreana are hamate with clearly visible denticles. In contrast, the outer lateral teeth of C. umiushi are almost straight with inconspicuous denticles.
Cadlina japonica is distinguished from Cadlina koreana sp. nov. by brownish patches on the dorsum and an elongate rachidian tooth with lobe-like denticles. Cadlina kamchatica clearly differs from Cadlina koreana by its yellowish body color and the higher number of denticles on the rachidian tooth and lateral tooth. The common Cadlina species in the northeastern Pacific, C. luteomarginata MacFarland, 1966, differs from Cadlina koreana by yellow dots on the dorsum and a yellow rim to the mantle. The other species in this region, C. flavomaculata MacFarland, 1905, also has yellow dots on the dorsum that are not present in Cadlina koreana. The color of C. modesta MacFarland, 1966 is light yellowish to light brown while it is translucent white in Cadlina koreana. Compared to Cadlina koreana, three Cadlina species recently described by
The species is named after the country of its type locality.
Cadlina koreana sp. nov. is currently known only from Munamjin-ri, South Korea.
Cadlina umiushi
Korshunova, Picton, Sanamyan & Martynov, 2015 in
Cadlina olgae Chichvarkhin, 2016: 12–14, fig. 4.
One individual, voucher NIBRIV0000865972; South Korea, Gangwon-do, Goseong-gun, Jugwang-myeon, Munamjin-ri; 38°18'14.75"N, 128°34'1.05"E; collected on 02 June 2013 (COI GenBank number: MT420435). One individual, voucher SMU00060; South Korea, Gangwon-do, Goseong-gun, Jugwang-myeon, Munamjin-ri; 38°18'14.75"N, 128°34'1.05"E; collected on 02 June 2013 (COI GenBank number: MT420436).
Body ovate, 8 mm and 9 mm long. Living specimens with a translucent white dorsum (Fig.
Cadlina umiushi was first described in
Northern part of Sea of Japan (Russia) to Munamjin-ri (South Korea).
Cadlina japonica
Baba, 1937: 76–78, fig. 1;
Two individuals, vouchers: NIBRIV0000865973 and NIBRIV0000865974; South Korea, Gangwon-do, Goseong-gun, Jugwang-myeon, Munamjin-ri; 38°18'14.75"N, 128°34'1.05"E; collected on 02 June 2013 and 20 July 2019 (COI GenBank numbers: MT420432 and MT420433). One individual, voucher NIBRIV0000865975; South Korea, Gyeongsangbuk-do, Uljin-gun, Uljin-eup, Yeonji-ri; 37°00'0.59"N, 129°26'1.89"E; collected on 25 August 2011 (COI GenBank number: MT420434).
Size up to 55 mm long. Live specimens commonly opaque white with a yellowish ground color and several dark brownish patches present on the dorsum (Fig.
Cadlina japonica was first described by
Reproductive systems of Cadlina species A Cadlina koreana sp. nov. B Cadlina umiushi C Cadlina japonica. Abbreviations: a, ampulla; bc, bursa copulatrix; fgm, female gland mass; rs, receptaculum seminis; pr, prostate; sv, seminal vesicle; ud, uterine duct; v, vaginal duct; vd, vas deferens. Scale bars: 0.5 mm (A, B); 2 mm (C).
Southern Hokkaido to southern Honshu (Japan) and East Sea, South Korea (Sea of Japan).
Analyses of the three molecular markers also demonstrated differences between Cadlina koreana sp. nov. and other Cadlina species recorded in GenBank. The BLAST results showed that C. umiushi is the closest species to Cadlina koreana with 93.8% and 95.3% similarity in the COI and 16S rRNA genes, respectively. The number of taxonomic groups based on ABGD analysis for COI varied from 11 to 13, depending on the intraspecific divergence prior (p) value (Suppl. material
A phylogenetic tree of three concatenated markers (COI, 16S rRNA, and 28S rRNA) was reconstructed to determine the positions of the three species of Cadlina found in South Korea (Fig.
Phylogenetic tree based on concatenation of COI, 16S rRNA, and 28S rRNA markers. Sequences generated in this study are marked with back squares; the remaining sequences were obtained from GenBank. Accession numbers of COI sequences appear in front of species names to identify specific specimens as in Suppl. material
Species of the genus Cadlina are widely distributed in the northern temperate regions. Cadlina japonica, the first species of this genus reported from the northwestern Pacific region (
Cadlina koreana is the fifth species recorded in the northwestern Pacific region. The new species can be differentiated from all previously described species by a combination of morphological and molecular markers. Similar to most Cadlina species, the ground color of Cadlina koreana is white. However, the distinct characteristics of Cadlina koreana are the absence of both the yellow tubercles on the dorsum and a yellow marginal band, two features present in most Cadlina species found in the northern Pacific (
Moreover, the presence of C. umiushi in Korean waters is described for the first time. The morphology of C. umiushi collected in the present study resembled that of other specimens described in previous studies (
It is challenging to identify Cadlina species based on morphology because of similar characteristics and morphological conservatism. Molecular markers are well known as a useful tool to support the identification of this group (
According to the phylogenetic tree, Cadlina koreana sp. nov., C. japonica, and C. umiushi formed independent clusters. Interestingly, three separate groups of C. umiushi were observed that corresponded with the three geographical collection sites. The ABGD and phylogenetic analyses showed some distances within C. umiushi among the collection sites. This result was congruent with the morphological examination discussed above and could indicate a possible hidden diversity within this species. It is worth noting that the number of specimens in this study as well as in the surveys of
Based on morphology and analyses of three molecular markers, three Cadlina species are identified from South Korea: Cadlina koreana sp. nov., C. umiushi (a new record for South Korea), and C. japonica. These results demonstrate the usefulness of the combination of morphological examination and molecular analyses in species identification, termed integrative taxonomy by
This work was supported by a National Research Foundation of South Korea (NRF) grant funded by the South Korean Government (MSIP) (No. NRF-2018R1D1A1B07042858) and a grant from the National Institute of Biological Resource (NIBR) funded by the Ministry of Environment (MOE) of South Korea (NIBR No. 2016-02-001). We thank Mr. Jung-il Kim (Department of Biotechnology, Sangmyung University) for his support in the preparation and examination of radulae.
Tables S1–S3
Data type: molecular data
Explanation note: Table S1. Collection information and Genbank accession numbers of samples. Table S2. Sequences obtained from GenBank used in the present study. Table S3. Intraspecific and interspecific distances (%) of Cadlina species based on COI and 16S rRNA sequences. Species with multiple sequences available for each marker were targeted for analysis. Table S4. ABGD analysis for COI sequences of Cadlina species. Table S5. ABGD analysis for 16S rRNA sequences of Cadlina species.
Figure S1
Data type: molecular data
Explanation note: Phylogenetic tree based on concatenation of COI and 16S rRNA markers. Sequences generated in this study are marked with black squares; the remaining sequences were obtained from GenBank. Accession numbers of COI sequences appear in front of species names to identify specific specimens listed in Table S1 and Table S2. The tree was constructed using the Maximum Likelihood method with 1000 bootstrap replicates in MEGA X software (A) and Bayesian Inference in MrBayes software (B). Aldisa sanguinea and A. smaragdina were used as the outgroup. Numbers at nodes indicate bootstrap and posterior probability values. The values > 50 (BS) and 0.5 (PP) are provided.