Research Article |
Corresponding author: Konstantin B. Gongalsky ( kocio@mail.ru ) Academic editor: Samuel James
© 2020 Maksim I. Degtyarev, Iurii M. Lebedev, Ksenia G. Kuznetsova, Konstantin B. Gongalsky.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Degtyarev MI, Lebedev IM, Kuznetsova KG, Gongalsky KB (2020) A history of study and new records of terrestrial enchytraeids (Annelida, Clitellata, Enchytraeidae) from the Russian Far East. ZooKeys 955: 79-96. https://doi.org/10.3897/zookeys.955.53106
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A list of terrestrial enchytraeids of the Russian Far East is compiled based on literature and extensive field data collected by the authors in 2019. A database has been created consisting of geographic coordinates, habitat type, species, and data source. For some species collected by the authors, barcoding using COI, 16s, and 12s rRNA genes has been performed. In total, there are at least 62 species of enchytraeids belonging to 12 genera. Seven species (Achaeta macroampullacea, Cognettia sphagnetorum, Enchytraeus dichaetus, Fridericia cusanica, Globulidrilus riparius, Marionina southerni, Mesenchytraeus gigachaetus) are reported in the Russian Far East for the first time. Cognettia sphagnetorum and F. cusanica are most probably introduced. Taxonomic and biogeographical remarks on some of the species found and differences from the original descriptions are provided. Some of the specimens may be undescribed species, but this requires a more in-depth examination. The Russian Far East, especially its southeastern part, is of great interest as a possible location for new species of enchytraeids.
biodiversity, COI, potworms, soil fauna, 12S rRNA, 16S rRNA
The Russian Far East (hereafter referred to as RFE) ranges in climate, from arctic deserts in the north to dry steppes and broadleaf forests in the south. In this paper, RFE is equated with the Far Eastern Federal District of Russia, which includes the Republic of Buryatia, Sakha Republic (Yakutia), Kamchatka, Khabarovsky, Primorsky, and Zabaykalsky Krais, Amur, Magadan and Sakhalin Oblasts, Chukotka Autonomous Okrug, and Jewish Autonomous Oblast. This region occupies 40.6% of the territory of Russia (
The Enchytraeidae are a family of terrestrial oligochaetes consisting mainly of small unpigmented annelid worms. Enchytraeids inhabit all continents and are perhaps the most widespread representatives of the Clitellata (
At the same time, the RFE, as well as the territory of Russia as a whole, the enchytraeid fauna has been poorly studied, and this situation has persisted since the 1980s (
In the last decade, many studies have been conducted on the fauna of enchytraeids of the territories geographically close to the RFE: Manchuria (
In the summer of 2019, we have collected much material from across the RFE, between the city of Magadan (northern coast of the Okhotsk Sea) and the southernmost areas of Primorsky Krai. The identity of some species was confirmed with the help of molecular analysis of the genes COI, 12S rRNA, and 16S rRNA.
In this study we summarize currently available data on the fauna of terrestrial enchytraeids of the RFE, both from the literature and our own new data.
To estimate terrestrial enchytraeid diversity of the RFE, a database has been created. It includes the following attributes: geographic coordinates of sampling sites, habitat type, species, and data source. Data on enchytraeids from marine and freshwater environments were not included.
Data from literature. We included data collected by other researchers. These data are mostly from tundra and taiga habitats (see below). Although there are numerous reports of enchytraeids in soil samples in the soil-zoological literature, we only included those studies where enchytraeid species were identified.
Our data. We collected our material during July and August 2019 in Khabarovsky, Primorsky, and Zabaykalsky krais, as well as Amur, Magadan, and Sakhalin oblasts (Fig.
Species were identified according to
Some samples were selected for genetic analysis. The DNA extraction was performed using “ExtractDNA blood” kits (Evrogen, Russia). In each sample the entire enchytraeid body was used for DNA extraction. We amplified one or two of three mitochondrial regions: 12S rRNA, 16S rRNA, and cytochrome oxidase I (COI) genes. The COI fragment is the standard DNA barcode for animals (
The phylogenetic analysis for species of Fridericia Michaelsen, 1889 was conducted using the maximum likelihood (ML) method. Enchytraeus albidus Henle, 1837 was chosen as an outgroup. Phylogenetic analysis involved 25 16S rRNA nucleotide sequences; 20 of them were obtained from NCBI GenBank. The sequences were aligned using Clustal Omega (
The phylogenetic analysis for species of Bryodrilus Ude, 1892 was conducted using the Bayesian inference (BI) method. Henlea perpusilla Friend, 1911 was chosen as an outgroup. Phylogenetic analysis involved 10 COI mDNA nucleotide sequences; nine of them were obtained from NCBI GenBank. The sequences were aligned using Clustal Omega (
DNA sequences of enchytraeid species originally obtained in this study. Species, localities and GenBank accession numbers are given in columns.
Species | Locality | GenBank accession numbers | ||
---|---|---|---|---|
12S | 16S | COI | ||
Bryodrilus sp. A | 6 km north-east of Terney, Primorsky Krai, Russia. Quercus-Betula forest. Cambisol soil. 45°02'29N, 136°40'56E. | MT241728 | N/A | MT237714 |
Fridericia bulboides type 'a' | Near Serebryanka river, Primorsky Krai, Russia. Sparse Betula forest. Cambisol soil. 45°06'42N, 136°31'51E. | MT241729 | MT232978 | N/A |
Fridericia bulboides type 'c' | same | MT241730 | MT232979 | N/A |
Fridericia bulboides type 'c' | same | MT241731 | MT232980 | N/A |
Fridericia bulboides type 'd' | same | N/A | MT232981 | N/A |
Mesenchytraeus gigachaetus | 6 km north-east of Terney, Primorsky Krai, Russia. Quercus-Betula forest. Cambisol soil. 45°02'29N, 136°40'56E. | MT214330 | N/A | MT160424 |
The habitats are described and the geographical coordinates (WGS 84) are provided with varying degree of precision depending on the information given in the original source. For the sites based on literature data, the respective references are given. The absence of a literature reference presumes that enchytraeids from this site were identified by us. In the absence of an accurate geographical reference (literature from the beginning of the 20th century), a point on the map (Fig.
[1] New Siberian Islands. Between 74°30'–76°N, 137–150°E (
[2] Kotelny Island. Between 74°30'–76°N, 137–144°E (
[3] New Siberian Islands. Between 74°30'–76°N, 137–150°E (
[4] New Siberian Islands. Between 74°30'–76°N, 137–150°E (
[5] Primorsky Krai, Upper Ussuri station ca 35 km NE of Chuguyevka. Litter of Ulmus wood in a mountain stream valley. Ca 44°23'N, 134°12'E (
[6] Primorsky Krai, Upper Ussuri station. Litter of Picea and Abies forest with Dryopteris and Pleuzorium. Ca 44°04'N, 133°56'E (
[7] Taiga forests near Magadan (with azonal habitats: stream bank and riparian birch forest). Ca 59°30'N, 151°50'E (
[8] Tundra at the Chaun Bay research station (including mesic heath, mountain area and wet meadow). Ca 68°44'N, 170°36'E (
[9] Kotelny Island. 75°03'30"N, 140°11'24"E (
[10] Faddeyevsky Island. 75°29'36"N, 143°44'30"E (
[11] Lopatka Peninsula. 72°11'06"N, 148°26'18"E (
[12] NE Kolyma Delta. 69°21'18"N, 163°34'48"E (
[13] Wrangel Island. 70°57'24"N, 179°33'24"E (
[30] Khabarovsky Krai, oak forest, Khekhtsir mountain range, 20 km south of Khabarovsk. Ca 48°11'N, 134°51'E (
[14] Near Ust-Imalka, Daurian Nature Reserve, Zabaykalsky Krai. Dry steppe with Stipa and Leymus. Kastanozem soil. 50°11'02"N, 115°26'09"E. 27.07.2019.
[15] South of Kulusutay, Daurian Nature Reserve, Zabaykalsky Krai. Dry steppe with Stipa and Leymus. Kastanozem soil. 50°08'36"N, 115°41'36"E. 28.07.2019.
[16] Borzya river bank, Zabaykalsky Krai. Periodically flooded meadow with Carex. Fluvisol soil. 50°31'23"N, 116°45'20"E. 25.07.2019.
[17] Adun-Chulun mountains, Daurian Nature Reserve, Zabaykalsky Krai. Mountain steppe with Leymus and Carex. Kastanozem soil. 50°28'14"N, 116°03'16"E. 29.07.2019.
[18] Near Pogibi, Sakhalin Oblast. Larix forest with Pinus pumila. Podzol soil. 52°11'47"N, 141°42'47"E. 11.07.2019.
[19] Pogibi, Sakhalin Oblast. Disturbed coniferous forest with Pinus pumila in suburban area. Podzol soil. 52°13'27"N, 141°39'19"E. 11.07.2019.
[20] Lazarev, Khabarovsky Krai. Typical taiga forest with Larix gmelinii predominance. Podzol soil. 52°11'18"N, 141°30'31"E. 12.07.2019.
[21] Near Lyublino, Primorsky Krai. Meadow/shrubland with Carex. Fluvisol soil. 44°54'15"N, 132°01'50"E. 07.08.2019.
[22] Lebedinoye, Primorsky Krai. Periodically flooded meadow with Carex. Fluvisol soil. 44°48'14"N, 132°45'23"E. 08.08.2019.
[23] 6 km north-east of Terney, Primorsky Krai. Quercus-Betula forest. Cambisol soil. 45°02'29"N, 136°40'56"E. 13.08.2019.
[24] Near Serebryanka river, Primorsky Krai. Sparse Betula forest. Cambisol soil. 45°06'42"N, 136°31'51"E. 14.08.2019.
[25] 10 km south of Terney, Primorsky Krai. Quercus-Betula forest. Cambisol soil. 44°57'19"N, 136°32'38"E. 15.08.2019.
[26] Gamova peninsula, Primorsky Krai. Sparse Quercus forest. Alfisol soil. 42°35'39"N, 131°11'44"E. 19.08.2019.
[27] Urup island, Sakhalin Oblast. Coniferous shrubland and meadow with Sasa kurilensis. Andosol soil. 45°53'32"N, 150°06'10"E. 09.08.2019.
[28] Eastern part of Staritskogo peninsula, Magadan Oblast. Alnus forest with high grass. Podzol soil. 59°30'08"N, 150°53'49"E. 28.07.2019.
[29] Suburban area near river Amur, Blagoveshchensk, Amur Oblast. Meadow/deciduous forest with Prunus padus and Acer. Cambisol soil. 50°17'18"N, 127°23'14"E. 05.08.2019.
[31] Near Kasatka Bay, Iturup island, Sakhalin Oblast. Abies forest and Picea forest with broadleaf undergrowth. Andosol soil. 45°00'10"N, 147°43'59"E. 20.08.2019.
We have found at least 12 genera and not fewer than 62 species in the RFE. No enchytraeids were found in sites [14] and [15], possibly due to the aridity of steppe habitats. The enchytraeid fauna consisted mostly of species from genera Mesenchytraeus Eisen, 1878 (15 species), Henlea Michaelsen, 1889 (10 species), Fridericia, and Marionina Michaelsen in Pfeffer, 1890 (nine species each), and Bryodrilus (seven species). Cognettia Nielsen & Christensen, 1959 is represented by four species, Enchytraeus Henle, 1837 by three species, Achaeta Vejdovský, 1878, Euenchytraeus Bretscher, 1906, and Hemifridericia Nielsen & Christensen, 1959 each by two species, and Globulidrilus Christensen & Dózsa-Farkas, 2012 and Hemienchytraeus Cernosvitov, 1934 each by a single species. The list of all the species, including those found in this study as well as those from the literature, with their localities is given in the Suppl. material
In addition to the species listed below, we also found several unidentified juvenile Bryodrilus at sites [27] and [28], Fridericia at [24, 26, 31], Hemienchytraeus at [29], Hemifridericia at [27], and Mesenchytraeus at [20, 23, 24, 26, 27, 28, 31]. For single records of species without a clear geographical reference, the approximate location is indicated directly in the list. Remarks on some species are also given below.
Genus Achaeta Vejdovský, 1878
Specimens are fully consistent with the original description. Described from Jeju Island, Korea (
Genus Bryodrilus Ude, 1892
Enchytraeids from sites [23], [25], and [26] are not typical B. diverticulatus, but similar worms were already described from both Greenland and the Canadian Arctic Archipelago as a variety of B. diverticulatus with smaller male organs (
The resulting tree of BI phylogenetic analysis is shown in Figure
Genus Cognettia Nielsen & Christensen, 1959
This species was recently separated into two, C. glandulosa s.s. and C. varisetosa (Martinsson, Erséus & Rota, 2015) (
As this species is predominantly European and even in Europe it has large genetic variation (
Genus Enchytraeus Henle, 1837
Specimens are fully consistent with the original description. Some specimens at [16] have a short ectal duct. Some specimens at [21] have refractile vesicles in the coelomocytes. This is the first report of this species in the Asian part of Russia. Possibly, it is a Holarctic species with a range extending from North Africa (
Genus Euenchytraeus Bretscher, 1906
Genus Fridericia Michaelsen, 1889
Four morphological types were discovered in our material (Fig.
Morphological characteristics of four different types of Fridericia bulboides. For indexes 1a–3d each numeral indicates a specific organ (1 sperm funnel 2 male gland (only outline shown) 3 end of spermathecal ectal duct and spermathecal ectal gland), letter corresponds to morphological type (a “classical” F. bulboides b F. bulboides with large spermathecal ectal gland c F. bulboides with big floppy sperm funnels, large male bulbs and compact glandular field near spermathecal ectal gland d F. bulboides with medium-sized male bulbs and compact glandular field near spermathecal ectal gland) 4 coelomocytes of F. bulboides with refractile vesicles at coelomo-mucocyte periphery (types a, b) 5 coelomocytes of F. bulboides without refractile vesicles at coelomo-mucocyte periphery (types c, d).
This species was described from Germany (
Differences from the original description (
The specimens from Primorsky Krai differed from the original description in the number of preclitellar nephridia (four). They had mostly three chaetae in lateral preclitellar bundles. The great distance to previously recorded localities (Hungary, Canada;
This is a new species. It will be described in an upcoming article.
This species does not fit the descriptions of the other species of Fridericia found in the RFE. This is a rare species, and more specimens needed for proper determination.
Genus Globulidrilus Christensen & Dózsa-Farkas, 2012
The specimens possess up to three chaetae in the ventral preclitellar bundles. This is the first find of this species and the genus in a terrestrial habitat in Russia. Globulidrilus riparius is possibly a trans-Palaearctic species having a range from Europe (
Genus Hemienchytraeus Cernosvitov, 1934
This is the first find of the genus in Russia. The taxonomic status was not determined due to the poor condition of the extracted specimens.
Genus Hemifridericia Nielsen & Christensen, 1959
This is probably a new species. More material is needed for a proper description, as it differs morphologically from the other three currently known Hemifridericia species (
Genus Henlea Michaelsen, 1889
Specimens from [29] and [31] had only four pairs of fully developed preclitellar nephridia (6/7 – 9/10), whereas nephridia in 10/11 were rudimentary or (in some specimens from [31]) completely absent.
Genus Marionina Michaelsen in Pfeffer, 1890
This species has an uncertain status and was not mentioned by
Specimens are 5 mm long, always with 37 segments, and with spermathecal ectal glands absent; the chaetal formula is 3 – 2 : 3,2 – 2. The shape of the spermatheca generally fits the original description, but the chaetal pattern is unlike the original (2 – 2 : 3 – 3). This is most probably a new species.
Genus Mesenchytraeus Eisen, 1878
Our specimens generally fit the original description, differing only in the shape of the sperm funnels (collar wide, open, wider than sperm funnel body). This is the first find of M. gigachaetus outside China.
Representatives of Mesenchytraeus were found only in taiga forests and tundra. Thus, the biogeographic border between coniferous and deciduous forests, which runs across the RFE (
A list of enchytraeids of the RFE is prepared for the first time and consists of at least 62 species. This number is about half the number of species in Germany (
This study was supported by the Russian Geographic Society (grant # 13-2019-R). We thank D. Korobushkin, A. Lekarev, G. Maksimova, V. Popadiev, R. Saifutdinov, V. Vasiliev, and A. Yurmanov for their assistance in sampling and delivery of soil samples. We also thank J. Schlaghamerský for taxonomic advice and A. Zaitsev for the comments on the advanced draft of the paper.
Table S1
Data type: species data