Research Article |
Corresponding author: Graham Short ( gshort@calacademy.org ) Academic editor: Nina Bogutskaya
© 2020 Graham Short, Louw Claassens, Richard Smith, Maarten De Brauwer, Healy Hamilton, Michael Stat, David Harasti.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Short G, Claassens L, Smith R, De Brauwer M, Hamilton H, Stat M, Harasti D (2020) Hippocampus nalu, a new species of pygmy seahorse from South Africa, and the first record of a pygmy seahorse from the Indian Ocean (Teleostei, Syngnathidae). ZooKeys 934: 141-156. https://doi.org/10.3897/zookeys.934.50924
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A new species and the first confirmed record of a true pygmy seahorse from Africa, Hippocampus nalu sp. nov., is herein described on the basis of two specimens, 18.9–22 mm SL, collected from flat sandy coral reef at 14–17 meters depth from Sodwana Bay, South Africa. The new taxon shares morphological synapomorphies with the previously described central Indo-Pacific pygmy seahorses, H. colemani, H. japapigu, H. pontohi, and H. satomiae, and H. waleananus, including diminutive size, twelve trunk rings, prominent cleithral ring and supracleithrum, spines on the fifth and twelfth superior and lateral trunk ridges, respectively, and prominent wing-like protrusions present on the first and/or second superior trunk rings posterior to the head. Hippocampus nalu sp. nov. is primarily distinguished from its pygmy seahorse congeners by highly distinct spine morphology along the anterior segments of the superior trunk ridge. Comparative molecular analysis reveals that the new species demonstrates significant genetic divergence in the mitochondrial COI gene from the morphologically similar H. japapigu and H. pontohi (estimated uncorrected p-distances of 16.3% and 15.2%, respectively). Hippocampus nalu sp. nov. represents the eighth member of the pygmy seahorse clade to be described from the Indo-Pacific, the first confirmed record from the African continent and the Indian Ocean, and an extension of more than 8000 km beyond the previously known range of pygmy seahorses from the Central and Western Indo-Pacific.
Africa, COI, cryptobenthic, ichthyology, marine fish, morphology, Sodwana Bay, taxonomy
The family Syngnathidae contains more than 300 species within 57 genera of predominantly small-bodied and cryptic marine fishes (
Pygmy seahorses have previously been recorded throughout the central Indo-Pacific with largely sympatric distributions, ranging from Thailand, Indonesia, Philippines, Palau, Papua New Guinea, Australia, Solomon Islands, New Caledonia, Vanuatu, Fiji, to Taiwan and central Japan (
Two specimens of H. nalu were collected by hand while scuba diving in 12–17 m depth. The holotype (SAMC-F04193) and paratype (SAMC-F04194) were deposited in the fish collection of the Iziko South African Museum (SAM), Cape Town, South Africa. Head and body measurements follow
Genomic DNA was extracted from the right eye of the 95% ethanol-fixed holotype of H. nalu SAM-MB-F041933) using a DNeasy Blood and Tissue Extraction Kit (Qiagen, Inc.) in accordance with the manufacturer’s protocols and initial tissue digestion overnight at 56 °C. A shotgun library was prepared from the extracted DNA using an Illumina Nextera DNA Flex library prep kit and sequenced using a MiSeq and 2×150 v3 reagent kit at the Ramaciotti Centre for Genomics (UNSW Sydney, Australia).
The mitochondrial genome was assembled by initially mapping reads to a reference 655 bp COI fragment from Hippocampus kuda (Genbank: EU930325) in Geneious v 10.05. When no reads could be further extracted from the shotgun dataset, sequences with a minimum average phred quality score of 30 were filtered out using BBDuk and used to assemble the complete mitochondrial genome with the De Novo Assemble function in Geneious. The mitogenome was annotated by comparison to the Hippocampus kuda mitochondrial genome (AP005985) and the Find ORFs function in Geneious using the Vertebrate Mitochondrial translation table. The complete mitochondrial genome of H. nalu is available from GenBank under accession number MT053858.
Genetic distances (uncorrected p-distances) were calculated based on COI using MEGA v. 7.0.26 (Kumar et al. 2017).
2 Mile Reef, Sodwana Bay, South Africa, 27°30'46.6"S, 32°41'10.4"E.
SAMC-F041933, 18.9 mm SL, female, 2 Mile Reef, Sodwana Bay, South Africa, 27°30'46.6"S, 32°41'10.4"E, 12–17 meters depth, 18 October 2018, L. Claassens, R. Smith, S. Olivier, scuba diving.
SAMC-F041934, 22 mm SL, male, 2 Mile Reef, Sodwana Bay, South Africa, 27°30'46.6"S, 32°41'10.4"E, 12–17 meters depth, 18 October 2018, L. Claassens, R. Smith, S. Olivier, scuba diving.
Published data was obtained for H. japapigu (
Hippocampus nalu sp. nov. is diagnosed by the following combination of characters: tail rings 29–30; dorsal fin rays twelve; pectoral fin rays ten; subdorsal rings four; two pairs of bilateral wing-like protrusions behind the head formed by a pair of large oblong spines projecting anterolaterad on the first superior trunk ridge and a pair of unique double cuspidate spines projecting anteriad on the second superior trunk ridge; double spine above the eyes; absence of spines at the sixth superior trunk and eighth inferior trunk ridges; superior trunk ridge ending with two subdorsal spines protruding laterad; the posteriormost spine greatly enlarged on twelfth trunk ridge.
Comparison of relative measurements and counts between H. nalu, H. japapigu, H. pontohi, H. colemani, H. satomiae, and H. waleananus based on type specimens.
H. nalu | H. nalu | H. japapigu | H. pontohi | H. colemani | H. satomiae | H. waleananus | |
Voucher | SAMC F041933 | SAMC F041934 |
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SL (mm) | 18.9 | 22.0 | 16.3 | 16.7 | 26.9 | 13.6 | 17.8 |
% SL | |||||||
Snout depth | 86.7 | 85.1 | 74.0 | 84.2 | 70.5 | 86.0 | 95.2 |
HL | 23.5 | 20.3 | 18.0 | 21.7 | 18.1 | 22.0 | 17.7 |
Trunk length | 29.9 | 30.9 | 32.6 | 33.3 | 32 | 30.0 | 31.3 |
Tail length | 46.5 | 48.9 | 49.4 | 45.0 | 50.0 | 48.0 | 63.4 |
Trunk depth at dorsal-fin origin | 27.1 | 28.1 | 18.7 | 13.5 | 19.2 | 13.0 | 15.0 |
% HL | |||||||
Coronet height | 48.6 | 51.2 | 58.1 | 47.4 | 45.6 | 40.2 | 48.3 |
Head depth | 63.6 | 69.1 | 69.9 | 60.6 | 62.6 | 51.8 | 67.9 |
Snout length | 25.4 | 25.6 | 28.7 | 23.2 | 27.7 | 27.0 | 26.8 |
Post-orbital length | 56.2 | 54.7 | 55.3 | 51.2 | 52.1 | 45.0 | 51.5 |
Trunk rings | 12 | 12 | 12 | 12 | 12 | 12 | 12 |
Tail rings | 29 | 30 | 28 | 28–30 | 26–28 | 27–28 | 32 |
Dorsal fin rays | 12 | 12 | 14 | 12 | 14 | 13 | 12 |
Pectoral fin rays | 10 | 10 | 9 | 9–10 | 9 | 9 | 9 |
General body shape as in Figs
Computed tomography scan of Hippocampus nalu, SAMC-F041933, holotype, female, 18.9 mm SL, 2 Mile Reef, Sodwana Bay, South Africa A lateral view of head and trunk area B anterolateral view of first and second superior trunk ridge spines (STrR1-2) C close-up lateral view of second superior trunk ridge cuspidate spines (STrR2). Abbreviations: ES, double eye spines; SOC, supraoccipital; CO, coronet; SC, supracleithrum; STrR1, first superior trunk ridge spine; STrR2, second superior trunk ridge spines; STrR5, fifth superior trunk ridge spine; STrR12, twelfth superior trunk ridge spine.
In life, H. nalu (Figs
Hippocampus nalu in situ, SAMC-F041933, holotype, female, Sodwana Bay, South Africa at 14 m depth (photograph Richard Smith / oceanrealmimages.com).
Hippocampus nalu in situ, SAMC-F041934, paratype, male, Sodwana Bay, South Africa at 14 m depth (photograph Richard Smith / oceanrealmimages.com).
Hippocampus nalu is currently known only from shallow (12–17 meters depth) waters in Sodwana Bay, South Africa, which falls within the iSimangaliso Wetland Park, a World Heritage Site that stretches from Lake St Lucia in the south to the Mozambique border in the north, and along the north coast of KwaZulu Natal province. However, the new species likely has a wider distribution along the East African coast and remains undetected because of its cryptic behaviour and diminutive size, and therefore its occurrence further north off East Africa in Mozambique, Tanzania, and Kenya, and offshore to Madagascar, may be confirmed by future localised ichthyofaunal surveys.
Sodwana Bay is situated near the southern end of the tropical western Indo-Pacific marine ecoregion, and is a subtropical transition zone between the tropics to the north and the warm temperate region to the south; consequently, it maintains the southernmost reef formations dominated by coral in Africa (
The underwater ecosystems where H. nalu was observed consisted of flat sandstone-based coral reefs in addition to unique topographic features (Ramsay et al. 1994) comprising low pinnacles, shallow drop offs, and sandy gullies, the latter being exposed to strong currents. Hippocampus nalu was found loosely associating with short algal turf, used as a holdfast, which was growing on sand-covered coral bedrock separated by sandy gullies (around 2 meters wide). The ambient seawater temperature averaged approximately 24 °C during the dives, which were conducted in October of 2018. The second and third authors experienced strong swells on the exposed reefs of 2 Mile Reef during data collection. The holotype and paratype appeared to be a mated pair, which were found within approximately 60 cm distance of each other on the two dives and their behaviour was observed prior to collection. Direct interaction, however, was not observed. Behaviour was very similar to congeners H. pontohi and H. japapigu (
Named after Savannah Nalu Olivier who discovered the new species in Sodwana Bay. In the South African languages, Xhosa and Zulu, nalu refers to the expression ‘here it is’ and therefore we extend its meaning in this case to the simple fact that H. nalu was there all along until its discovery. Additionally, the species name nalu is also the Hawaiian word that refers to the waves or surf of the moana (ocean), for that reason we find the name relevant as H. nalu was observed moving about in strong surge to different locations in the sandy habitat. A noun in the genitive.
New English Names: Sodwana pygmy seahorse, African pygmy seahorse, and Honeypot seahorse are proposed here for Hippocampus nalu.
A total of 7,259,439 forward and reverse reads were recovered from the shotgun library of which 13,133 were used to assemble the mitogenome of H. nalu (coverage: mean=117.1, SD=20.3). The mitogenome of H. nalu is 16,470 bp in size consisting of 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and a control region (D-loop). Suppl. material
Comparison of morphological characters between H. nalu, H. japapigu, and H. pontohi.
H. nalu | H. pontohi | H. japapigu | |
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Data source | SAMC F041933-F041934 |
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Single gill opening | present | ||
Elevated cleithral girdle | present | ||
Coronet | distinct and elevated | ||
Cleithral spines | pectoral fin base, ventral of 1st trunk ring | ||
Subdorsal rings | 3 trunk +1 tail | ||
Lateral head spine | present | ||
Broad snout spine | present | ||
Eye spine dorsad | double | single | |
Eye spine ventrad | single | ||
1st superior trunk ridge spines | present | ||
2nd superior trunk ridge spines | present | present | absent |
Elevated ridge on trunk | absent | present | |
5th superior trunk ridge spines | present | ||
5th lateral trunk ridge spines | present | ||
6th superior trunk ridge spines | absent | present | |
8th lateral trunk ridge spines | present | ||
8th inferior trunk ridge spines | absent | present | |
Subdorsal trunk ridge spines | 11th,12th | 10th,11th,12th | |
Superior tail ridge spines | 5th, 9th, 12th | ||
Inferior tail ridge spines | absent |
Hippocampus nalu shares morphological synapomorphies with its congeners H. pontohi, H. japapigu, H. colemani, H. satomiae, and H. waleananus, including meristics, distinct coronet, 12 trunk rings, prominent cleithral ring and supracleithrum, large spines on the fifth and twelfth superior and lateral trunk ridges, respectively, large spine on the eighth lateral trunk ridge, and prominent wing-like protrusions present on the first and/or second superior trunk rings posterior to the head (Table
Hippocampus nalu shares with H. pontohi a pair of large moderately oblong spines that project anterolaterally from the first superior trunk ridge (Figs
Hippocampus nalu can be distinguished from H. japapigu (Table
Hippocampus nalu is similar to H. colemani and H. satomiae primarily on the basis of two pairs of large spines on the first and second superior trunk ridges, respectively (
Hippocampus nalu in situ, juvenile, approximately 10 mm SL, Sodwana Bay, South Africa at 14 m depth (photograph Richard Smith / oceanrealmimages.com).
Here, we consider Hippocampus nalu as a valid species due to its genetic and morphological uniqueness; however, a more comprehensive phylogenetic study is necessary to elucidate its evolutionary relationship to its pygmy congeners. Using micro-computed tomography scans, we have identified key diagnostic characters in the highly distinct spine morphology of the two pairs of bilateral wing-like spines present on the first and second superior trunk ridges that differentiate H. nalu from the morphologically similar H. japapigu and H. pontohi. Hippocampus nalu, H. colemani, H. japapigu, H. pontohi, H. satomiae, and H. waleananus are united by numerous morphological synapomorphies and morphologically conserved to the extent that it is difficult to distinguish the species based on external appearance alone, and appear to form a natural grouping in comparison to the distinct H. bargibanti and H. denise. However, based on examined specimens so far, Hippocampus nalu, H. japapigu, and H. pontohi can be primarily distinguished from one another by features of the distinct morphology and number of wing-like spines on the superior trunk ridges as revealed by μCT scans (
Seven new species of pygmy seahorses have been officially described and named within the first two decades of the 21st century (
We are grateful to the many research colleagues who contributed in the field, lab, observations, and congenial discussions: Savannah Nalu Olivier, Instructor and Dive Master, Pisces Diving, Sodwana Bay, South Africa, for the amazing discovery of H. nalu in South Africa; Christo van Jaarsveld and Petro van Jaarsveld from SeaXplore dive centre and lodge, Sodwana Bay, for arranging scuba logistics for specimen collection by second and third authors in Sodwana Bay; David Delport for assistance in the field; Peter Teske, University of Johannesburg, for assistance with collection permits; Christopher Goatley, University of New England, Australia, for μCT scans of the type specimens of H. nalu; Adam Summers, Friday Harbor Laboratories, University of Washington, for use of lab and CT visualization software; Albé Bosman, Collections Manager, Marine Biodiversity Collections, National History Department, Iziko South African Museum, for curatorial assistance; iSimangaliso Wetland Park and Enzemvelo KZN Wildlife for providing authorisation for the collection of specimens; Amanda Hay, Collections Manager, Department of Ichthyology, Australian Museum, for amazing curatorial assistance. Special thanks to Betsy Royce and Turner Dean for providing convivial friendship and home during the writing of the manuscript. This research was generously supported in part by funding from NSF (DBI-1759637, DEB-170166) to Adam Summers, Friday Harbor Laboratories, University of Washington, and from the Australian Museum Research Institute.
Genetic distance analysis (uncorrected p distances) of COI sequence data from H. nalu, H. bargibanti, H. denise, H. japapigu, and H. pontohi
Data type: Genetic data