Research Article |
Corresponding author: Ho Young Soh ( hysoh@chonnam.ac.kr ) Corresponding author: Hae-Lip Suh ( suhhl3464@gmail.com ) Academic editor: Christopher Glasby
© 2018 Man-Ki Jeong, Ho Young Soh, Jin Hee Wi, Hae-Lip Suh.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Jeong M-K, Soh HY, Wi JH, Suh H-L (2018) A new Notomastus (Annelida, Capitellidae) species from Korean waters, with genetic comparison based on three gene markers. ZooKeys 754: 141-155. https://doi.org/10.3897/zookeys.754.23655
|
Notomastus koreanus sp. n., collected from the sublittoral muddy bottom of Korean waters, is described as a new species. The Korean new species closely resembles N. torquatus Hutchings & Rainer, 1979 in the chaetal arrangement and the details of abdominal segments, but differs in the position of genital pores and the absence of eyes. DNA sequences (mtCOI, 16S rRNA, and histone H3) of the new species were compared with all the available sequences of Notomastus species in the GenBank database. Three genes showed significant genetic differences between the new species and its congeners (COI: 51.2%, 16S: 38.1–47.3%, H3: 3.7–9.3%). This study also includes a comprehensive comparison of the new Korean Notomastus species with its most closely similar species, based on the morphological and genetic results.
Polychaeta , Notomastus koreanus sp. n., morphology, DNA barcoding, COI, 16S rRNA, histone H3, South Korea
Capitellid polychaetes build spiral burrows or U-shape tubes in bottom sediments, which increase the subsurface penetration of water and oxygen, thus improving the recruitment and growth of small benthic organisms (
The taxonomic boundary of the genus Notomastus has been continually modified over the last century. The genus was designated by
Morphological analysis. Samples were collected from seven stations in sublittoral areas of Korea using a 0.05 m2 Van Veen grab (Fig.
A list of sampling localities, species names, sample types, voucher numbers, Genbank accession numbers, and references.
Location | Latitude / Longitude (DDM) | Species name | Type | Voucher number | Accession number of Genbank | References | |||
---|---|---|---|---|---|---|---|---|---|
mtCOI | 16SrRNA | histone H3 | |||||||
South Korea | Yeosu | 34°39.03'N, 127°40.86'E | N. koreanus sp. n. | Paratype | NA00146048 | MG437146 | MG748697 | MG748700 | This study |
Paratype | NA00146049 | MG437147 | MG748698 | MG748701 | |||||
Busan | 35°5.83'N, 129°2.42'E | Paratype | NA00066329 | MG437148 | MG748699 | ||||
35°6.33'N, 129°3.31'E | Holotype | NA00066337 | |||||||
Hwaseong | 37°8.95'N, 126°35.39'E | NA00066302 | MG748696 | ||||||
Geoje | 34°54.17'N, 128°36.98'E | Paratype | NA00066311 | ||||||
Pohang | 36°1.31'N, 129°25.16'E | Paratype | NA00066396 | ||||||
Portugal | Sado estuary | 38°29.22'N, 8°53.1'W | N. profondus | RR132 | KR916897 |
|
|||
Canada | Bamfield | N. hemipodus | HM746714 | HM746759 |
|
||||
Sweden | Bohuslän | N. latericeus | SMNH75827 | AY340469 | DQ779747 |
|
|||
Australia | N. torquatus | AMW23426 | AF185258 |
|
|||||
China | Bohai Sea | 38°21.12'N, 120°7.92'E | Notomastus sp. | BIOUG03550-A09 |
|
Molecular analysis. Genomic DNA was extracted from tissue obtained from partial dissection of the middle part of the abdomen of the ethanol-preserved specimens. To extract the genomic DNA, 1.5 mL centrifuge tubes each containing 90 μL of 10% Chelex suspension (Bio-Rad Laboratories Inc.), 10 μL of Proteinase K (10 mg/ml, iNtRON Biotechnology, Inc.) and dissected tissues (ca. 1/2 segment) were incubated at 56 °C for 3–12 hours.
The extracted genomic DNA was used as a template to amplify the target region. Polymerase chain reaction (PCR) was performed on a MasterCycler PCR thermal cycler (Eppendorf Co.). The primer pair for COI was LoboF1 and LoboR1 (
The forward and reverse sequences were compared and edited using Chromas software version 2.3 (Technelysium Pty. Ltd.). The partial sequences of the COI, 16S rRNA and H3 genes were aligned with the sequences of available Notomastus species obtained from GenBank (https://www.ncbi.nlm.nih.gov/genbank/) using the Molecular Evolutionary Genetics Analysis (MEGA) software version 7.0 (
Notomastus latericeus Sars, 1851
Komagfjord, Norway
(modified after
According to the former generic diagnosis by
Holotype: MABIKNA00066337, sex uncertain, Busan, 35°6.33'N, 129°3.31'E (DDM), subtidal, sandy mud bottom, 16 m depth, October 2011, collected by Byoung-Mi Choi. Paratypes: MABIKNA00146048, MABIKNA00146049, sex uncertain, Yeosu, 34°39.03'N, 127°40.86'E, subtidal, sandy mud bottom, 20 m depth, October 2017, collected by Man-Ki Jeong; MABIKNA00066329, sex uncertain, Busan, 35°5.83'N, 129°2.42'E subtidal, sandy mud bottom, 15 m depth, October 2011, collected by Byoung-Mi Choi; MABIKNA00066396, sex uncertain, Pohang, 36°3.09'N, 129°23.55'E, subtidal, sandy mud bottom, 12 m depth, January 2012, collected by Byoung-Mi Choi; MABIKNA00066311, sex uncertain, Geoje, 34°54.17'N, 128°36.98'E, subtidal, sandy mud bottom, 10 m depth, January 2012, collected by Byoung-Mi Choi.
MABIKNA00115263, sex uncertain, Busan, 35°4.7'N, 128°55.4'E, subtidal, sandy mud bottom, 14 m depth, January 2012, collected by Byoung-Mi Choi; MABIKNA00066302, sex uncertain, Hwaseong, 37°8.95'N, 126°35.39'E, subtidal, sandy mud bottom, 20 m depth, September 2011, collected by Byoung-Mi Choi; MABIKNA00066303, MABIKNA00115303, sex uncertain, Seosan, 37°2.03'N, 126°23.94'E subtidal, sandy mud bottom, 15 m depth, September 2011, collected by Byoung-Mi Choi; MABIKNA00066385, sex uncertain, Pohang, 36°1.31'N, 129°25.16'E subtidal, sandy mud bottom, 12 m depth, November 2010, collected by Byoung-Mi Choi; MABIKNA00115314, sex uncertain, Wando, 34°22.12'N, 127°0.79'E, subtidal, sandy mud bottom, 10 m depth, September 2011, collected by Byoung-Mi Choi. Additional 3 specimens from type locality on SEM stub.
Thorax with achaetigerous peristomium and 11 chaetigers. Anterior 5 thoracic segments tessellated. First chaetiger without neuropodia. Chaetigers 1–11 with capillary chaetae only. Abdominal chaetigers with hooded hooks only. Lateral organs not protruded above surface, narrow and oval shape, present along body. Genital pores present in intersegmental furrows between chaetigers 7–8, 8–9, 9–10, and 10–11. Parapodial lobes in anterior to moderate abdominal region not protruded. Posteriorly extended parapodial lobes present on posterior abdominal segments. Pygidium without anal cirri.
Holotype entire, about 80 mm long, 1.2 mm wide for 280 chaetigers. Paratype material ranges from 31–87 mm in length, 0.7–1.3 mm width with 30–270 chaetigers. Body elongate, rounded dorsally, flattened ventrally, widest in anterior thoracic chaetigers, with ventral white line in abdominal region. Color in alcohol whitish yellow.
Prostomium conical, with short and rounded palpode; nuchal organs not seen, eyespots absent (Figs
Notomastus koreanus sp. n. A anterior end, left lateral view (MABIKNA00146048) B same, dorsal view (MABIKNA00146048) C posterior abdominal segments, left lateral view (Holotype, MABIKNA00066337) D posterior end, left lateral view (Holotype, MABIKNA00066337). Abbreviations: cc, capillary chaetae; gp, genital pore; hh, hooded hooks; lo, lateral organ; neu, neuropodium; no, notopodium; pro, prostomium; prob, proboscis; per, peristomium; transition, transition between thorax and abdomen.
Notomastus koreanus sp. n. A−C photomicrographs A anterior end in left lateral view (showing methyl green staining reaction, MABIKNA00066311) B chaetigers 9–15 in left lateral view (MABIKNA00066396) C posterior end (MABIKNA00066396) D–G scanning electron micrographs (using additional specimens from type locality) D anterior 6 thoracic segments in left lateral view E capillary chaetae of chaetiger 4 F–G abdominal hooded hooks in frontal view. Abbreviations: cc, capillary chaetae; Ch, chaetiger; genP, genital pore; hh, hooded hooks; lo, lateral organ; mf, main fang; neu, neuropodium; no, notopodium; per, peristomium; pro, prostomium; prob, proboscis; transition, transition between thorax and abdomen.
Thorax with 12 segments including achaetous peristomium and 11 chaetigers (Figs
Transition between thorax and abdomen distinguished by changes in shape of chaeta and segment (Figs
Hooded hooks with main fang extending slightly beyond hoods; hood slightly flared. Main fang of hooded hooks with 3 rows of small teeth; 5 in basal row, 6–8 in second row, and at least 6 in superior row (Fig.
Digitiform branchiae not observed in abdomen; each notopodial lobe with posteriorly extended semicircular lamella in posterior abdomen (Figs
Anterior thoracic segments (peristomium and chaetigers 1–6) not stained. Posterior thoracic segments (chaetigers 7–10 or 11) stained (Fig.
The new species is named for its wide distribution in coastal waters of Korea.
The subtidal areas (10–20 m) near Korea (Fig.
Notomastus koreanus sp. n. was sampled from soft sediments throughout the year. Most well-developed individuals (having over 250 segments) were obtained between October and January. The sediment of the collecting stations was mainly composed of sandy mud with shell fragments. Leiochrides yokjidoensis Jeong, Wi & Suh, 2017 and an undescribed Heteromastus Eisig, 1887 species co-occurred in southern stations of this study.
Notomastus koreanus sp. n. is distinguished from other species of the genus by the morphological combination of absence of distinct eyes and first neuropodia, last thoracic chaetigers with only capillary chaetae, presence of genital pores between chaetigers 7–11, non-protruded lateral organs and neuropodial lobes in anterior abdomen, and posteriorly extended parapodial lobes in posterior abdomen. The new Korean Notomastus species closely resembles N. torquatus Hutchings & Rainer, 1979 in the chaetal arrangement, the absence of developed neuropodial lobes in anterior abdomen, and the presence of posteriorly extended parapodial lobes in the posterior abdomen (Table
Morphological comparison between Korean Notomastus species and its closely similar species. A: absent; P: present; Ch: chaetiger; NM: not mentioned; abd: abdomen; th: thorax; uni: uniramous; bi: biramous.
Species | First Ch | Eyes | Distinct palpode | Lateral organs | Genital pores | Dental structure of hooks | Parapodial lobes in posterior abdomen | Methyl green staining patterns | Habitat (locality) | References |
---|---|---|---|---|---|---|---|---|---|---|
N. koreanus sp. n. | uni | A | P | not protrude | between Ch 7–11 | >17 teeth in 3 rows (5/6–8/>6) | parapodial lobes posteriorly extended | dorsum of Ch 7 and Ch 8–10 stained blue, Ch 5–6 and 11 sometimes stained, abd with 2 ventral blue lines | subtidal, 10–20 m, sandy mud with shell fragments (Korea) | This study |
N. latericeus | bi | P | P | not protrude | between Ch 7–20 | 3 rows (5/?/?) | not extended | NM | intertidal to abyssal, sand, mud (cosmopolitan) |
|
N. hemipodus | uni | P (single pair) | P | protrude on anterior abd | between Ch 8–12 | 16–24 teeth in 3 rows (4–6/6–8/6–8) | bilobed notopodial lobes posteriorly extended | Ch 1–6 green, Ch 7–10 blue, dorsum of abd green, abd with 2 ventral blue lines | intertidal to shelf depths, 0.5–426 m (America) | García-Garza et al. 2012, |
N. tenuis | uni | P (eyespots) | A | protrude on anterior abd | between Ch 5–10 | many teeth (NM) in 4–5 rows | notopodial lobes posteriorly extended | Whole segments stained with light green | intertidal to shallow subtidal (America) | García-Garza et al. 2012 |
N. torquatus | uni | P (eyespots) | P | NM | between Ch 3 or 5– 10 | 16–24 teeth in 3 rows (4–6/6–8/6–8) | parapodial lobes posteriorly extended | NM | sea grass beds on muddy sand (Australia) |
|
To confirm the genetic distances among the new species and its closely related species, we used the partial sequences of mitochondrial (mtCOI and 16S rRNA) and nuclear (histone H3) genes. In all genetic comparisons, the intraspecific differences among the Korean specimens were negligible (0–0.1%, Table
Mean genetic distances between examined Notomastus species based on K2P distance. Bold numbers represent the mean intraspecific K2P distance of Korean specimens.
mtCOI | 1 | 2 | 3 |
---|---|---|---|
1. N. koreanus n. sp. (Korea) | 0.001 | ||
2. Notomastus sp. (China) | 0.007 | – | |
3. N. profondus (Portugal) | 0.512 | 0.506 | – |
16S rRNA | 1 | 2 | 3 |
1. N. koreanus n. sp. (Korea) | 0.000 | ||
2. N. hemipodus (Canada) | 0.381 | – | |
3. N. latericeus (Sweden) | 0.473 | 0.441 | – |
histone H3 | 1 | 2 | 3 |
1. N. koreanus n. sp. (Korea) | 0.000 | ||
2. N. torquatus (Australia) | 0.037 | – | |
3. N. latericeus (Sweden) | 0.070 | 0.088 | – |
4. N. hemipodus (Canada) | 0.093 | 0.092 | 0.075 |
1 | First chaetiger biramous; dorsally protruded neuropodial lobes present in anterior abdomen; genital pores present between chaetigers 7–20 | N. latericeus Sars, 1851 |
– | First chaetiger uniramous; dorsally protruded neuropodial lobes absent in anterior abdomen; posteriorly extended notopodial lobes present in posterior abdomen | 2 |
2 | Lateral organs protruded above surface in anterior abdominal region | 3 |
– | Lateral organs not protruded above surface in anterior abdominal region | 4 |
3 | Palpode indistinct; posterior abdominal region with unilobed notopodial lobes; genital pores present between chaetigers 5–10; all segments stain green in MGSP | N. tenuis Moor, 1909 |
– | Distinct palpode present; posterior abdominal region with bi-lobed notopodial lobes; genital pores present between chaetigers 8–12; chaetigers 1–6 and dorsum of abdomen stain green, chaetigers 7–10 stain blue in MGSP | N. hemipodus Hartman, 1945 |
4 | Eyespots present on posterior prostomium; genital pores present between chaetigers 3 or 5–10 | N. torquatus Hutchings & Rainer, 1979 |
– | Eyespots absent on prostomium; genital pores present between chaetigers 7–11; dorsum of chaetiger 7 and chaetiger 8–10 stain blue in MGSP | N. koreanus n. sp. |
We would like to acknowledge and thank Dr. Hutchings and Dr. Glasby who made constructive and invaluable suggestions and useful comments. We also thank the captain and crew of the R/V Cheong-Gyeong-Ho for their support at sea. This work was supported by a grant from the National Institute of Biological Resources (