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Research Article
Description of a new species of Stauropathes (Anthozoa, Antipatharia, Schizopathidae) from Puerto Rico
expand article infoJeremy Horowitz, Mina Barajas§, Luke J. McCartin|, Samuel A. Vohsen|, Santiago Herrera|
‡ Smithsonian Institution, National Museum of Natural History, Washington, United States of America
§ California State Polytechnic University, Homboldt, United States of America
| Lehigh University, Bethlehem, United States of America
Open Access

Abstract

A new species of black coral, Stauropathes monopinnata sp. nov., represented by two specimens collected 738 m and 1604 m deep off Puerto Rico and Hawaii, respectively, is recognized in the family Schizopathidae. The new species is characterized by a monopodial, unbranched corallum; simple, suboppositely arranged pinnules in two anterolateral rows along the stem with nearly 90° distal angles, spaced 12–17 mm apart in a row, and with smooth and triangular spines 0.05–0.08 mm tall; and polyps 4–9 mm in transverse diameter. A phylogeny composed of 90 taxa representing species in Schizopathidae and Cladopathidae (rooted in Cladopathidae) was reconstructed from 794 nuclear loci to show their systematic relationships. Herein, we provide morphological and molecular evidence to show that this new species is distinct from other species in the genus Stauropathes.

Key words:

Black coral, genome skimming, molecular phylogenetics, morphology, targeted capture, taxonomy, ultra-conserved elements

Introduction

Black corals are a group of hexacorals that occur in all oceans (except northern Arctic Ocean and hydrothermal vents) and depths from just below the surface to 8600 m. The taxonomy of black corals is undergoing an order-wide taxonomic review with novel data like next-generation sequencing techniques, which are providing greater phylogenetic resolution than single locus or even full mitochondrial genomes (Horowitz et al. 2020; Quattrini et al. 2024).

During the Schmidt Ocean Institute expedition FKt230417, titled ‘Health Diagnostics of Deep-Sea Coral’, 74 black corals were collected from the deep waters off Puerto Rico. This collection recently led to the discovery of new species representing a novel genus and family (Horowitz et al. 2024). Upon further examination of this collection, we discovered a monopodial, unbranched colony characterized by simple suboppositely positioned pinnules, which is a common feature among species in Bathypathes Brook, 1889. However, it differed from Bathypathes species in that the distances between the members of each subopposite pair of pinnules were extremely small, almost opposite, the colony had wide spaces between pinnules in a row, and the longest pinnules were also the lowermost ones on the stem, which are common among species of Stauropathes Opresko, 2002. A second specimen, collected from deep waters off Hawaii, during the National Oceanic and Atmospheric Administration expedition titled: ‘Hohonu Moana: Exploring Deep Waters off Hawai’i’ possesses these same morphological characteristics. Both specimens, containing Stauropathes-like characters with the exception that they were not branched, were sequenced using genome skimming. We bioinformatically extracted conserved element loci to build a phylogenetic tree and place the new species within the Schizopathidae Brook, 1889. This analysis revealed that these specimens are more closely related to each other than to any other currently sequenced species, both falling as sister to nominal Stauropathes species including the type specimen of the type species, Stauropathes staurocrada Opresko, 2002 (USNM 98846). Herein, we present morphological and molecular evidence to describe this new-to-science species.

Material and methods

Specimen collection and deposition

The holotype was collected at Whiting Bank, 25 km southeast of Puerto Rico, 738 m deep during the Schmidt Ocean Institute expedition FKt230417 entitled: ‘Health diagnostics of deep-sea coral’ (Fig. 1) onboard the R/V Falkor (too) in 2023. The complete colony was collected using a manipulator arm of the ROV SuBastian. The paratype was collected 250 km southeast of Midway Atoll, Hawaii at a depth of 1604 m during the National Oceanic and Atmospheric Administration expedition entitled: ‘Hohonu Moana: Exploring Deep Waters off Hawai’i’ onboard the R/V Okeanos Explorer in 2016. Both specimens are deposited in the collections of the National Museum of Natural History (NMNH), Smithsonian Institution, Washington DC.

Figure 1. 

Locations where the holotype (yellow dot) and paratype (red dot) were collected.

Morphological analyses

The morphological characters of the specimens representing the new species were compared with nominal and currently accepted species in the genera Bathypathes and Stauropathes.

The skeletal spines were examined by cutting small fragments of the skeleton and removing the tissue with bleach and a sonicator. The fragments were then mounted on stubs and coated with a 30–40 nm thick layer of 60% gold: 40% palladium and imaged using a Zeiss EVO MA 15 scanning electron microscope (SEM). SEM stubs are deposited at the NMNH. SEM stub numbers are from a series established by the authors at the NMNH. Spine height was measured as the distance from the spine tip to the middle of the base of the spine. Polyp in transverse diameter was measured as the distance from the distal edge of the distal lateral tentacles to the proximal edge of the proximal lateral tentacles. Branch diameter was measured near the base of the branch. Distance between pinnules of the same pair was measured from the middle of the base of the lower pinnule to the middle of the base of the upper pinnule.

We define the distinction between pinnule and pinnulated branch based on the similarity or dissimilarity of branching patterns at successive branch or ramification orders. If a ramification exhibits the same pinnulation pattern and length as its immediate lower-order ramification, it is a pinnulated branch, and its pinnules are first-order pinnules (Fig. 2A), as seen in Telopathes MacIsaac & Best, 2013 and Stauropathes. Conversely, if the pinnulation pattern changes at higher orders, each ramification represents a distinct pinnule order (Fig. 2B), as in Myriopathes Opresko, 2001.

Figure 2. 

A example of a branching colony with a stem and pinnulated branches (black lines) and primary pinnules (green lines) B example of an unbranched colony with a stem (black line), primary pinnules (green lines), and secondary pinnules (blue lines).

Molecular analyses

DNA was extracted from the holotype specimen USNM 1689279 alongside all specimens collected in Puerto Rico using the AutoGen GenePrep (AutoGen, Holliston, MA, USA) in the Laboratories of Analytical Biology (LAB) at the NMNH. GenePrep automatically extracts DNA using Phenol-Chloroform purification with high throughput. Extracted DNA was quantified using the QuantIT 1X dsDNA high-sensitivity kit (ThermoFisher Scientific, Waltham, MA, USA). Sequencing libraries were prepared in half reactions using the New England Biolabs (Ipswich, MA, USA) Next Ultra II FS DNA Library Prep kit with incubation times of either 7.5 or 8.5 mins for enzymatic shearing. Bead cleanups were performed using KAPA pure beads (Roche Diagnostics, Indianapolis, IN, USA) and an Opentrons robot with a bead ratio of 0.8X (Long Island City, NY, USA). Using Y-yoke adapter sequences, samples were indexed with unique combinations of iTru i5 and i7 barcode indices before pooling (Glenn et al. 2019). Library preparation for some samples failed, and libraries for these samples were re-prepared after further purifying the DNA extract using a Qiagen PowerClean Cleanup Pro kit following the manufacturer’s instructions (Qiagen, Hilden, Germany).

For the paratype specimen from Hawaii (USNM 1424060) and all other specimens that were collected outside Puerto Rico waters, DNA was extracted with the DNeasy Blood and Tissue Kit (Qiagen, Germany), cleaned with the Qiagen Power Clean Pro kit, and concentrations were estimated using a High Sensitivity Qubit 4 Fluorometer (Invitrogen, US). High molecular weight DNA was sheared using a QSonica Inc Sonicator Q800R to a target size range of 400–800 bp and then checked via gel electrophoresis on a 1.5% agarose gel. Afterwards, DNA libraries were prepared with the Kappa Hyper Prep protocol using a ½ reaction with iTruSeq adapters and dual indexes (Glenn et al. 2019) following Quattrini et al. (2018).

For all specimens included in this study, DNA extraction and library preparation were conducted at LAB. Paired-end sequencing (150 bp) was performed on an Illumina - NovaSeq X Plus at the Oklahoma Medical Research Foundation Genomics Facility with other samples to obtain 10M paired-end (PE) reads (150 bp) per sample. Raw reads are deposited in the short read archive (SRA) of the National Center for Biotechnology Information (https://www.ncbi.nlm.nih.gov/).

Phylogenetic analysis

The conserved loci were obtained from the high-throughput sequencing data. Raw reads were trimmed using Trimmomatic v. 0.35 (Bolger et al. 2014) and assembled using Spades v. 3.15 (Prjibelski et al. 2020). Ultra-conserved elements (UCEs) and exon loci were extracted from the assembled data using the hexacoral-v2-baitset (Cowman et al. 2020), following the Phyluce pipeline (https://phyluce.readthedocs.io/en/latest/tutorials/tutorial-1.html) (Faircloth 2016) with modifications: minimum-identity and minimum-coverage thresholds set to 70%. These data were combined with loci that were determined to be conserved across black corals previously (see Horowitz et al. 2020, 2022, 2023a, 2023b, 2024). Loci were internally trimmed and aligned with MAFFT v. 7.130 (Katoh and Standley 2013). Then, phyluce_align_get_only_loci_with_min_taxa was used to obtain all loci with 50% taxon-occupancy, which were concatenated using phyluce_align_concatenate_alignments. 50% taxon-occupancy was chosen because it maximizes the number of loci incorporated into the phylogenetic reconstruction and, based on previous phylogenetic studies, yields high support values (Horowitz et al. 2023a, 2024). The phylogenomic inference was conducted on the concatenated dataset using maximum likelihood analysis in IQ-TREE v. 2.1 (Minh et al. 2020). A partitioned analysis (Chernomor et al. 2016) was conducted on the dataset using the best model for each locus [-m TESTMERGE (Kalyaanamoorthy et al. 2017)]. Ultrafast bootstrapping [-bb 1000 (Hoang et al. 2018)] and the Sh-like approximate likelihood ratio test [-alrt 1000 (Anisimova et al. 2011)] were also selected. All analyses were run on the Smithsonian’s High-Performance Computing Cluster (https://doi.org/10.25572/SIHPC) housed at the Herndon Data Center, in Herndon VA, except for the phylogeny, which was built using FigTree v. 1.4.4 and R v. 4.4.1.

Taxonomic results

Family Schizopathidae Brook, 1889

Stauropathes Opresko, 2002

Diagnosis (emended from Opresko 2002).

Corallum monopodial, unbranched or branched and pinnulate to the first order. Pinnules in two lateral or anterolateral rows and arranged in subopposite pairs. Spines smooth, triangular, and laterally compressed. Polyps 3–9 mm in transverse diameter.

Type species.

Stauropathes staurocrada Opresko, 2002 (by original designation).

Type locality.

North-central Pacific Ocean.

Remarks.

This study demonstrates that the unbranched corallum with bilateral and subopposite pinnules is polyphyletic, occurring in the genera Bathypathes and Stauropathes, warranting emendation to the generic diagnosis for Stauropathes. Further, the two genera do not form monophyletic groups, where Stauropathes spp. (CMNI 2023-0258, USNM 1404493, and USNM 1424220) fall into the clade that consists of a majority of Bathypathes, while Bathypathes alaskensis Opresko & Molodtsova, 2021 (USNM 1013749) falls into the clade that consists of a majority of Stauropathes. Another finding of this study is that Telopathes is not polyphyletic, contradicting Cruz et al. (2024); however, additional sequence data from these three genera may suggest more complicated relationships, possibly fueled by hybridization and/or introgression, which has yet to be formally tested for any species in the order.

Stauropathes monopinnata Horowitz & Barajas, sp. nov.

Figs 1, 3, 4, 5, 6, Table 1, Suppl. material 1

Material examined.

Holotype • USNM 1689279, Whiting Bank, Puerto Rico, 17.8398°N, 65.6976°W, 738 m depth. Schmidt Ocean Institute R/V Falkor (too), FKt230417, Health diagnostic of deep-sea coral, ROV SuBastian dive 518, April 29, 2023 (SEM stub No. 538). Paratype • USNM 1424060, 250 km southeast of Midway Atoll, Hawaii, 26.65°N, 175.4°W, 1604 m depth. NOAA (National Oceanic and Atmospheric Administration) R/V Okeanos Explorer, Cruise EX1603, Hohonu Moana: Exploring Deep Waters off Hawaii, ROV Deep Discoverer dive 5, March 5, 2016 (SEM stub 539).

Type locality.

Whiting Bank, Puerto Rico, 738 m depth.

Diagnosis.

Corallum monopodial, planar, unbranched, and pinnulate to the first order. Pinnules in two anterolateral rows and arranged in subopposite (almost opposite) pairs. Lowermost pinnules on stem 8 cm or more in length, decreasing in length towards apex of colony. Spines smooth and triangular with a rounded apex, 0.05–0.08 mm tall. Polyps 4–9 mm in transverse diameter, 2–3 mm interpolypar space, four to eight polyps counted per 5 cm.

Description of holotype.

The holotype (USNM 1689279) is a 15 cm tall monopodial colony (Fig. 3A–C). The unpinnulated section is about 2 cm based on in situ imagery because the basal plate and lowermost section of unpinnulated stem were not collected (Fig. 3C). The pinnulated section is 13 cm in length. Pinnules are simple, arranged in two anterolateral rows and in subopposite pairs (Fig. 3A, B). The pinnules are curved towards the abpolypar side of the colony. The lowermost pinnules on the stem are 8.3 cm in length, pinnules midway up the pinnulated section of the stem are 8 cm in length, and the uppermost pinnules on the stem are 4.2 cm in length. Diameter of the lowermost pinnule near the base of the pinnule is ~1 mm. Distance between pinnules in one row ranges from 1.3 to 1.7 cm and distance between pinnules of the same pair (i.e., on opposite sides of the stem) is < 1 mm, in some cases nearly opposite (Fig. 3B). Eight pinnules can be counted per 5 cm including pinnules in both rows. The distal angle of pinnules is 80–90° except for the uppermost pinnules, which are about 45° (Fig. 3A–C), and the interior angle formed by the subopposite pinnules is 160–180° (Fig. 3A).

Figure 3. 

Stauropathes monopinnata sp. nov. holotype: USNM 1689279 A collected colony with B blue rectangle showing zoomed-in view of pinnule pattern C in situ image of colony D in situ image of colony showing zoomed-in view of polyp characteristics E section of pinnule showing polyp characteristics.

Polyps are arranged in a single row (Fig. 3C, D). Polyps are 8–9 mm in the transverse diameter with 0.2–0.3 mm interpolypar space, resulting in polypar density ranging from 4 to 5 per 5 cm (Fig. 3E). Based on in situ imagery, tentacles exceed 1 cm when fully extended and the tissue color is dark red, and when preserved is dark red to dark brown.

Spines (Fig. 4A–C) are smooth and triangular with a rounded apex (Fig. 4C) that is at right angles to the axis or slightly inclined distally, with long and sloping distal and proximal edges. Polypar and abpolypar spines are 0.03 to 0.05 mm tall. The spines on pinnules are arranged in longitudinal rows, six to seven of which can be seen in one view (Fig. 4A, B). Spines are spaced 0.12–0.33 mm apart in a row, with about four to five spines per mm (Fig. 4A, B).

Figure 4. 

Stauropathes monopinnata sp. nov. holotype: USNM 1689279 A, B sections of pinnules showing skeletal spines C zoomed-in view of a singular skeletal spine.

Description of the paratype.

The paratype (USNM 1424060) is a 14 cm tall colony (lowermost section of stem not collected) and the pinnulated section of stem is 12 cm (Fig, 5A). Based on in situ imagery (https://data.oceannetworks.ca/SeaTube?resourceTypeId=1000&resourceId=23621&diveId=3000&time=2016-03-06T00:56:55.000Z), the whole colony was approximated to be ~25 cm in length and the unpinnulated section of stem was ~7 cm in length. Striatum is present and distinct from the lower broken-off end of the stem to the lowermost pair of pinnules. Pinnules are simple, arranged in anterolateral rows and in subopposite pairs (Fig. 5A). The lowermost pinnules are 2.5 and 3.0 cm long; however, based on in situ imagery (Fig. 5B) the lowermost pinnules were the longest on the colony prior to subsampling. Pinnules midway up the pinnulated section of the stem are 8.0 cm long and the most distal pinnules are 1.3 cm long (Fig. 5A). Diameter near the base of the pinnule is ~1 mm. Distance between pinnules in one row ranges from 1.2 to 1.4 cm and distance between members of the subopposite pairs is < 1 mm (Fig. 5A). In some cases, the members of a pair appear to be directly opposite to one another. Ten pinnules can be counted per 5 cm including pinnules in both rows (Fig. 5A). Distal angle of pinnules is 80–90° and the interior angle formed between pinnules of a subopposite pair is 160–180° (Fig. 5A).

Figure 5. 

Stauropathes monopinnata sp. nov. paratype (USNM 1424060) A collected colony B in situ image of colony C, D sections of pinnules showing skeletal spines E zoomed-in view of a singular skeletal spine.

Figure 6. 

Maximum likelihood phylogeny of antipatharians of the families Schizopathidae and Cladopathidae based on a 50% complete matrix containing 794 loci. Taxa in green rectangle represent the holotype and paratype specimens of the new species. Ultrafast Bootstrap support values are 100% at all nodes unless noted with an asterisk (*). Red branches were artificially shortened and do not represent true branch length. The phylogeny rooted to Cladopathidae.

Polyps are arranged in a single row and are 4–6 mm in transverse diameter with an interpolypar space of 2 mm. Polypar density ranges from seven to eight per 5 cm. Based on in situ imagery, the tissue is dark red, and when preserved, it is brown to dark brown (Fig. 5B).

Spines are smooth, laterally compressed, and triangular with a rounded apex (Fig. 5C–E). Spines are 0.03–0.06 mm tall. The spines on pinnules are arranged in longitudinal rows, seven to eight of which can be seen in one view (Fig. 5C, D). Spines are spaced 0.23–0.36 mm apart in a row with about three to four spines per mm (Fig. 5C, D).

Intraspecies variation.

Both specimens possess simple pinnules with wide distal angles, arranged in slightly anterolateral rows, and in subopposite pairs that are almost opposite. Spacing between pinnules in one row is wide in both specimens: ≤ 1.7 cm in the holotype and ≤ 1.4 cm in the paratype, resulting in eight and ten pinnules per 5 cm. The spines on both specimens are short (≤ 0.06 mm tall), smooth, triangular with a rounded apex, and arranged in longitudinal rows, seven to eight of which are visible in lateral view. Tissue color is similar for both specimens; dark red in situ and a dark red-to-brown when preserved.

A minor difference between the holotype and paratype is that based on in situ footage, the paratype pinnules are more rigid than the holotype. A major difference between the holotype and paratype is their polyp characteristics, where the holotype has polyps 8–9 mm in transverse diameter with 0.2–0.3 mm interpolypar space, resulting in a density of four to five polyps per 5 cm, while the paratype’s smaller polyps are 4–6 mm in transverse diameter with 0.2 cm interpolypar space, resulting in a higher density of seven to eight per 5 cm. This is a notable difference that could be interpreted as the holotype and paratype representing different species. However, without additional specimens possessing similar morphological traits as these specimens with differing-sized polyps, it is premature to describe these two specimens as polyp size could vary within the species.

Phylogenetic results.

A total of 63–1052 conserved element loci were obtained per specimen. Total number of contigs ranged from 234,560 to 439,048,041 base pairs (bp) (average lengths ranged from 109 to 953 bp). The 50% taxon-occupancy matrix included 794 loci that were concatenated into an alignment with a total length of 385,232 bp. A 75% taxon-occupancy matrix, including 465 loci, was also run to compare results, and the topology in the region of the trees, including the new species, did not change. Read and locus summary statistics are detailed in Suppl. material 1.

The two specimens representing the new species with 100% branch support fell sister to the clade containing Stauropathes staurocrada (USNM 98846 species- and genus-level holotype specimen, and USNM 1071042) (Fig. 5), supporting our decision to place the new species in Stauropathes. This clade also contains Stauropathes cf. punctata (Roule, 1905) (USNM 1606527), Stauropathes cf. stellata Opresko, 2019 (USNM 1424179), and Bathypathes alaskensis (USNM 1013749).

Comparative diagnosis.

Stauropathes monopinnata sp. nov. differs from the four other species in the genus morphologically. The most prominent difference is that the new species is unbranched whereas the other species are branched. The new species also has wider distances between pinnules in a row; reaching 1.7 cm in the holotype compared to a maximum of 1.2 cm in S. staurocrada and S. arctica (Lütken, 1871), and 0.8 cm in S. stellata and S. punctata. Four of the species in the genus possess small spine heights less than 0.07 mm (spine measurements were not reported for the type of S. punctata). The species however, differ in the number of rows of spines that can be seen in one lateral view of a pinnule. The number of rows for the new species (six to eight visible on a pinnule diameter of 0.25 mm) is greater than that for S. staurocrada (four to six on pinnule diameter of 0.28 mm) and S. stellata (three to four on pinnule diameter of 0.28 mm) and less than S. arctica (nine to ten on pinnule diameter of 0.34 mm). The new species also has polyps that are 4 to 9 mm in transverse diameter, equal to or larger than S. staurocrada (4 mm), and the range includes polyps of S. stellata (6 mm) and S. arctica (7 mm). The transverse diameter of the polyps was not reported for S. punctata. A complete comparison of the morphological features of Stauropathes species can be found in Table 1.

Table 1.

Comparison of species in the genus Stauropathes.

Feature S. monopinnata sp. nov. S. monopinnata sp. nov. S. staurocrada c S. stellata d S. punctata e S. arctica f
holotypea paratypeb
Corallum unbranched unbranched branched branched branched branched
Stem length (cm) (pinnulated / unpinnulated) 13 / 2 12 / 2 (unpinnulated section incomplete) 13 / not collected 6.3 / 6.1 21 / not collected 20 / 5
Pinnule diameter near base (mm) 1 1 1 0.5 1 Not reported
Pinnular angle (distal / interior) 45–90°/ 160–180° 80–90°/ 160–180° 60–70°/ 90–150° 80–90°/ 160–180° 80–90°/ 160–180° 80–90°/ 160–180°
Distance between pinnules on one side (mm) 13–17 12–14 8–12 5–10 6–8 12
Max Pinnule length (cm): 8.3 8 2 5.5 1 3
Pinnule density per 5 cm (both rows) 8 10 5–6 8 Not reported Not reported
Number of orders of pinnules 1 1 1 1 1 >1?g
Spine height (mm) 0.03–0.05 0.03–0.06 0.04–0.06 0.06–0.07 Not reported 0.02–0.06
Spine ornamentation Smooth Smooth Smooth Smooth Not reported Smooth
Number of spine rows per view 6–7 7–8 4–6 3–4 Not reported 9–10
Space between spines in one row (mm) 0.12–0.17 0.11–0.44 0.12–0.24 0.21–0.33 Not reported 0.06–0.12
Spine density per 1 mm 4–5 4 8 4–6 Not reported 5
Polyp transverse diameter (mm) 8–9 4–6 2–4 5–6 Not reported 3–7
Polyp density per 5 cm 4–5 7–8 10–11 6–7 Not reported Not reported
Number of polyps between adjacent pinnules in the same row 2 2 2 Not reported Not reported Not reported
Striatum Lowest section not collected Striations present until first row of pinnules Present Present from 2 cm above basal plate and extends 4 cm Not reported Not reported

While the lack of branches and the two rows of subopposite pinnules in the new species is typical of Bathypathes species, it differs morphologically in several ways: the distances between the members of each subopposite pair are smaller, and in some cases, the pinnules are almost opposite; the colonies have wider spaces between pinnules in a row, and the longest pinnules are also the lowermost ones on the stem.

Etymology.

The specific name derives from the Latin “mono” (one) and “pinnata” (feathered) referring to the new species general appearance due to the distinctive lack of branches compared to the other species in the genus.

Distribution.

Known from North Central Atlantic Ocean to North Pacific Ocean from 738 to 1604 m depth.

Discussion and conclusions.

This study presents morphological and molecular evidence to support the description of a new species within the genus Stauropathes. Furthermore, this study provides the most speciose molecular phylogeny of the family Schizopathidae to date, including specimens representing all 13 accepted schizopathid genera, holotypes or paratypes of 20 species, five of which also represent types at the genus level, and 12 species sequenced for the first time.

The new Stauropathes species, which lacks branches (like Bathypathes), required an emendation of the diagnosis of Stauropathes to include unbranched morphotypes. Additionally, the finding of one Bathypathes species in the Stauropathes clade and two Stauropathes species in the Bathypathes clade suggests they have a complicated evolutionary history, possibly driven by convergent evolution or hybridization.

Speciation is complex, and the phylogenetic models used in black coral studies have relied on maximum likelihood analyses with General Time Reversible substitution model, which does not account for processes like hybridization, recombination, or site-specific variation in substitution rates (Steenwyk et al. 2023). When dealing with complicated evolutionary histories, which seems to be the case for genera in Schizopathidae (see also ‘The Trigeneric Complex’ described in Bledsoe-Becerra et al. (2022)) a multispecies coalescent model should be used for estimating phylogenies while accounting for unresolved lineage sorting (Ramírez-Portilla and Quattrini 2023). This is an essential next step for resolving relationships at the species level for black corals.

Acknowledgements

The authors wish to thank W. Keel, W. Moser, and K. Reed for their assistance during visits to the Museum Support Center at the NMNH. The photomicrographs were prepared in the NMNH SEM Laboratory with assistance from S. D. Whittaker. Laboratory work was conducted in and with the support of the L.A.B. facilities of the National Museum of Natural History. We also thank the Schmidt Ocean Institute R/V Falkor (too) crew and personnel for their assistance and support, as well as Colleen Hansel, chief scientist of cruise FKt230417. We acknowledge the following museums and universities that made their material available for study: California Academy of Sciences, Canadian Museum of Nature Invertebrates, Museum of Tropical Queensland, National Institute of Water and Atmospheric Research, Tasmanian Museum and Art Gallery, University of Geneva, and the National Museum of Natural History. Specimens were provided by the National Institute of Water and Atmospheric Research Invertebrate Collection from various research voyages including: KAH024, TAN0413 “Seamounts: their importance to fisheries and marine ecosystems”, undertaken by the NIWA and funded by the New Zealand Foundation for Research, Science and Technology (FRST) with additional funding from the Ministry of Fisheries (MFish) and NOAA Satellite Operations Facility); TAN0802 Ross Sea IPY-CAML Survey funded by the New Zealand Government under the New Zealand International Polar Year Census of Antarctic Marine Life Project with project governance provided by the MFish Science Team and the Ocean Survey 20/20 CAML Advisory Group (Land Information New Zealand (LINZ), MFish, Antarctica New Zealand, Ministry of Foreign Affairs and Trade, and NIWA); TAN1007 Kermadec Arc Minerals (KARMA) voyage, funded by FRST, in collaboration with Auckland University, Institute of Geological and Nuclear Science (GNS), and Woods Hole Oceanographic Institute (WHOI); TAN1104 Ocean Survey 20/20 Mapping the Mineral Resources of the Kermadec Arc Project, funded by LINZ, GNS, NIWA, and WHOI; TAN1213 Nascent Inter-Ridge Volcanic And Neotectonic Activity (NIRVANA) voyage, funded by the Ministry for Primary Industries, in collaboration with Auckland University, GNS, and the University of New Hampshire, USA. SH was supported by NOAA award NA18OAR0110289 and the National Academies of Sciences, Engineering, and Medicine Gulf Research Program Early-Career Fellowship under award 2000013668. We thank Allana Christine Guliman for assistance with data management for this study. Research activities in Puerto Rico waters were coordinated with the Departamento de Recursos Naturales y Ambientales under permit # 2023-IC-019 (O-VS-PVSlS-SJ-01354-01022023).

Additional information

Conflict of interest

The authors have declared that no competing interests exist.

Ethical statement

No ethical statement was reported.

Funding

This project was funded in part by the Smithsonian Institution Barcode Network.

Author contributions

Conceptualization: JH. Data curation: JH, LJM, SH. Formal analysis: JH, LJM. Funding acquisition: SH. Investigation: LJM, SAV, MB, JH. Methodology: LJM, SH, MB, JH. Project administration: JH. Supervision: JH, SH. Validation: LJM. Visualization: MB, SH. Writing – original draft: LJM, JH, SH, MB, SAV. Writing – review and editing: LJM, JH, SAV, MB.

Author ORCIDs

Jeremy Horowitz https://orcid.org/0000-0002-2643-5200

Luke J. McCartin https://orcid.org/0000-0001-5374-3148

Samuel A. Vohsen https://orcid.org/0000-0003-1710-292X

Santiago Herrera https://orcid.org/0000-0001-7204-9434

Data availability

Raw sequence reads were submitted to GenBank under BioProject # PRJNA1078781. Bioproject and biosample information for all specimens are listed in Suppl. material 1.

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Supplementary material

Supplementary material 1 

Read and locus summary statistics for all specimens included in the study

Jeremy Horowitz, Mina Barajas, Luke J. McCartin, Samuel A. Vohsen, Santiago Herrera

Data type: xlsx

This dataset is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). The Open Database License (ODbL) is a license agreement intended to allow users to freely share, modify, and use this Dataset while maintaining this same freedom for others, provided that the original source and author(s) are credited.
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