Research Article |
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Corresponding author: Matteo Dal Zotto ( matteo.dalzotto@unimore.it ) Academic editor: Alessio Iannucci
© 2025 Federica Fonda, Liam Vezzani, Luis Ángel Mena Aguilar, Carlos Andrés Venegas-Elizondo, Alexander Bolaños Brenes, Dayron Manuel Lopez, Giuseppe Romeo, Dario Sonetti, Matteo Dal Zotto.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Fonda F, Vezzani L, Mena Aguilar LÁ, Venegas-Elizondo CA, Bolaños Brenes A, Lopez DM, Romeo G, Sonetti D, Dal Zotto M (2025) Mammal diversity and tourism influence in an under-investigated region of Costa Rica. ZooKeys 1260: 37-74. https://doi.org/10.3897/zookeys.1260.128800
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Costa Rica is one of the most biodiverse countries in the world, hosting almost 4% of all known mammals. Although the local mammals have undoubtedly been more investigated than those of other Central American countries, some regions still appear poorly known to date, such as the Nicoya Peninsula, NW Costa Rica. Our research focuses on the Karen Mogensen Wildlife Refuge, an important component of the Nicoya Peninsula Biological Corridor. This investigation represents the first comprehensive study of mammals of this area, with the aims to provide baseline information on the mammal community and tourism management. The investigation during a 6-year period (2018–2023) revealed the presence of 60 species, belonging to 50 genera, 23 families, and 8 orders, indicating a high species richness of the area. Among these, we highlight the occurrence of the globally Vulnerable Alouatta palliata and Cebus imitator and the Near Threatened Leopardus wiedii and Vampyrum spectrum, along with the recently recognised Lontra annectens, whose status is still Not Evaluated. The influence of tourism on activity patterns of mammals was also investigated. Using camera trapping, 13 species were detected in 537 trap-days and divided based on functional traits. No evidence of impacts caused by the presence of tourists was found on these species. This suggests that the current conservation policies of the Wildlife Refuge appear to be incorporating ecotourism in a wise and thoughtful manner. The information gathered will be a useful tool for the development and implementation of conservation strategies and actions at the local scale in the near future.
Activity patterns, camera trapping, checklist, conservation, mammal community, temporal overlap
The Central American Costa Rica, one of the 36 world biodiversity hotspots (
Today, the mammal conservation in Costa Rica is very delicate on account of two fundamental aspects. On the one hand, the second half of the last century was a dismal period for many Costa Rican mammals as a consequence of habitat loss caused by deforestation and pollution coming from the industrial, domestic, and agricultural sectors (
Species coexistence is ruled by several and complex mechanisms (
The presence of humans in wilderness and protected areas can disturb wildlife, inducing behavioural changes and shifts in diel activity patterns, even in response to non-lethal human activities such as hiking and recreational trekking (
Most studies on temporal patterns in species and community ecology have used camera trapping, a method that has proven to be very efficient for this kind of research (
In this study we investigated the mammal community of the Karen Mogensen Wildlife Refuge, located in the southern part of Nicoya Peninsula, northwestern Costa Rica. This region is one of the most poorly studied in all of Costa Rica (
The investigation took place in the Karen Mogensen Wildlife Refuge, SE Nicoya Peninsula, northwestern Costa Rica (Fig.
The area underwent significant alterations due to resource exploitation and farming in the past century, mostly cattle pasture. An extraordinary comeback began in 1996, thanks to the joint efforts of local and foreign organisations (
We collected observational data, some of which were obtained from previous surveys based on series of transects resulting in nearly 7 km of linear walk (i.e., Dal Zotto et al. 2017;
Camera trapping was used for the six-year investigation period, opportunistically. However, the data for analysing the activity patterns and the influence of tourism were collected in a more structured way from mid-January to mid-April 2019. Data were registered using six camera traps, which worked simultaneously 24 hours a day. Camera traps were placed along the paths in the study area, used also by the tourists, considering the presence of water and animal tracks, at an average distance among them of 753 m (Fig.
The species accumulation curve was used to evaluate the completeness of the species inventory during the camera trapping survey (
As almost all the entrances to the Karen Mogensen Wildlife Refuge are controlled by the local association ASEPALECO (Asociación Ecológica Paquera, Lepanto y Cóbano), we were able to identify the days when there was a possibility of human disturbance, i.e., tourists entering the Wildlife Refuge. To assess whether the target species were disturbed by human presence, we tested whether the daily activity patterns of mammals changed between days when tourists were present and days when they were not. After dividing the species detections into two classes, i.e., ‘with tourists’ and ‘without tourists’ days, we conducted exploratory analyses to test whether the presence of tourists influenced the diel activity patterns of: i) the most abundant species (> 40 detections), ii) the entire community, iii) nocturnal and diurnal species, and iv) species grouped by trophic level (herbivore, omnivore, and carnivore;
To avoid biased results, consecutive records of the species at the same camera trap site were considered independent if there was at least a 1-hour interval between them (
To assess the selection of each species for different periods of the diel cycle, a time band was assigned to each video depending on the time it was recorded. Following
Diel activity patterns were estimated non-parametrically through the probability density function using Kernel Density Estimate (
All statistical analyses were performed in R, using circular (
Overall, data collection based on different methods allowed us to detect the presence of 60 species in 50 genera, 23 families, and 8 orders. Of these, 30 are non-volant species (29 genera, 18 families, and 7 orders; Figs
Chiropterans directly observed at the Karen Mogensen Wildlife Refuge. A. Diclidurus albus; B. Balantiopteryx plicata; C. Saccopteryx bilineata; D. Chrotopterus auritus; E. Desmodus rotundus; F. Glossophaga soricina. Photographs by M. Dal Zotto (C, E, F), F. Ciccarello (D), F. Minati (B) and C. Venegas-Elizondo (A).
Checklist of the mammals of the Karen Mogensen Wildlife Refuge. The systematisation, the scientific and common names follow the Mammal Diversity Database (2025). Abbreviations. Sampling methods, CT: camera trapping; DO: direct observation; MI: mist netting; TS: track/scat finding; VO: listening of vocalisation. *, species detected through camera trapping from January to April 2019.
| Taxon | Vernacular name | Sampling method |
|---|---|---|
| DIDELPHIMORPHIA | ||
| Didelphidae | ||
| Caluromys derbianus | Derby’s woolly opossum | DO |
| Didelphis marsupialis* | Common opossum | CT, DO, TS |
| Philander opossum | Gray four-eyed opossum | DO |
| Marmosa zeledoni | Zeledon’s mouse opossum | DO |
| PILOSA | ||
| Myrmecophagidae | ||
| Tamandua mexicana* | Northern tamandua | CT, DO, TS |
| CINGULATA | ||
| Dasypodidae | ||
| Dasypus novemcinctus | Nine-banded armadillo | DO, TS |
| ARTIODACTYLA | ||
| Cervidae | ||
| Odocoileus virginianus* | White-tailed deer | CT, DO, TS |
| Tayassuidae | ||
| Dicotyles tajacu* | Southern collared peccary | CT, DO, TS |
| PRIMATES | ||
| Cebidae | ||
| Cebus imitator* | Panamanian white-faced capuchin | CT DO, TS |
| Atelidae | ||
| Alouatta palliata | Mantled howler | DO, TS, VO |
| CARNIVORA | ||
| Canidae | ||
| Canis latrans | Coyote | DO, TS, VO |
| Urocyon cinereoargenteus | Gray fox | DO |
| Felidae | ||
| Leopardus wiedii | Margay | DO |
| Leopardus pardalis* | Ocelot | CT, DO, TS |
| Herpailurus yagouaroundi | Jaguarundi | CT, DO, TS |
| Puma concolor* | Puma | CT, TS |
| Mephitidae | ||
| Conepatus semistriatus* | Striped hog-nosed skunk | CT, DO, TS |
| Spilogale angustifrons* | Southern spotted skunk | CT, DO |
| Mustelidae | ||
| Eira barbara* | Tayra | CT, DO, TS |
| Lontra annectens | Northern neotropical river otter | CT, TS |
| Procyonidae | ||
| Nasua narica* | White-nosed coati | CT, DO, TS |
| Potos flavus | Kinkajou | DO |
| Procyon lotor | Northern raccoon | CT, DO, TS |
| RODENTIA | ||
| Heteromyidae | ||
| Heteromys salvini | Salvin’s spiny pocket mouse | DO |
| Cricetidae | ||
| Oryzomys couesi | Coues’s rice rat | DO |
| Sigmodon hirsutus | Southern cotton rat | DO |
| Erethizontidae | ||
| Coendou mexicanus | Mexican hairy porcupine | DO |
| Dasyproctidae | ||
| Dasyprocta punctata* | Central American agouti | CT, DO, TS |
| Cuniculidae | ||
| Cuniculus paca* | Paca | CT, DO, TS |
| Sciuridae | ||
| Sciurus variegatoides | Variegated squirrel | DO |
| CHIROPTERA | ||
| Emballonuridae | ||
| Balantiopteryx plicata | Gray Sac-winged bat | DO |
| Diclidurus albus | Northern ghost bat | DO, MI |
| Saccopteryx bilineata | Greater Sac-winged bat | DO, MI |
| Natalidae | ||
| Natalus mexicanus | Mexican funnel-eared bat | DO |
| Noctilionidae | ||
| Noctilio leporinus | Greater bulldog bat | DO |
| Phyllostomidae | ||
| Artibeus jamaicensis | Jamaican fruit-eating bat | DO, MI |
| Artibeus lituratus | Gray fruit-eating bat | DO |
| Carollia perspicillata | Seba’s short-tailed bat | DO, MI |
| Carollia sowelli | Sowell’s short-tailed bat | MI |
| Carollia subrufa | Gray short-tailed bat | MI |
| Chrotopterus auritus | Big-eared woolly bat | DO |
| Dermanura phaeotis | Pygmy fruit-eating bat | MI |
| Dermanura watsoni | Thomas’s fruit-eating bat | MI |
| Desmodus rotundus | Common vampire bat | DO, MI |
| Diphylla ecaudata | Hairy-legged vampire bat | DO |
| Glossophaga commissarisi | Commissaris’s long-tongued bat | MI |
| Glossophaga leachii | Gray long-tongued bat | DO |
| Glossophaga soricina | Pallas’s long-tongued bat | DO, MI |
| Phyllostomus discolor | Pale spear-nosed bat | MI |
| Phyllostomus hastatus | Greater spear-nosed bat | DO |
| Platyrrhinus helleri | Heller’s broad-nosed bat | DO, MI |
| Sturnira parvidens | Northern yellow-shouldered bat | DO, MI |
| Trachops cirrhosus | Fringe-lipped bat | MI |
| Uroderma convexum | Mesoamerican tent-making bat | DO, MI |
| Vampyriscus nymphaea | Stripe yellow-eared bat | DO |
| Vampyrum spectrum | Spectral bat | DO, MI |
| Vespertilionidae | ||
| Myotis albescens | Silver-tipped myotis | DO |
| Myotis elegans | Elegant myotis | MI |
| Myotis riparius | Riparian myotis | MI |
| Rhogeessa bickhami | Bickham’s little yellow bat | MI |
Data collection over a wider timespan allowed us to detect the presence of further 17 non-volant species, and additional 16 genera, seven families, and one order. All these species were identified by direct observations and in some cases also by camera trapping (Table
In the following section we report information on all the non-volant species recorded, with that of the most relevant species of bats from a conservation perspective. The coordinates, date, and sampling method refer to the first record of each species in the investigation period.
Family Didelphidae Gray, 1821
Genus Caluromys J. A. Allen 1900
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'09"N, 085°03'30"W; 290 m alt.; 26.03.2021; direct observation.
Medium-sized. Characterised by a grey and reddish-orange fur, pink ears, and by a half-white and half-furred tail. The body is slender, with a prehensile tail constituting 58–67% of total length (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'11"N, 085°03'28"W; 298 m alt.; 05.03.2018; direct observation.
Medium-sized opossum, mainly nocturnal. Identified by shaggy grey guard hairs and pale underfur. The cheeks are characterised by a dirty yellow colour and its whiskers are black. The tail is longer than the head and body, black and white, with the white portion usually longer than the black one (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'05"N, 085°03'32"W; 290 m alt.; 05.02.2019; direct observation.
Medium-sized opossum, with nocturnal habits. Characterised by a white chin with darker upper labia, whitish belly and feet and a nearly uniform greyish brown dorsum. The ears are large and naked, rims are black, and a pale spot is present on forehead at medial base of ears. The tail is relatively small. Nose, lips, toes, and a region above chin are pink (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'00"N, 085°03'37"W; 285 m alt.; 15.04.2018; direct observation.
Small-sized opossum. The dorsal fur is dark, reddish-brown, slightly paler on body sides; it turns into a greyish-brown frosted with reddish-brown in older individuals. There is no midrostral stripe. Black eyes are surrounded by blackish-brown eye-rings (
Family Myrmecophagidae Gray, 1825
Genus Tamandua Gray, 1825
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'16"N, 085°03'27"W; 302 m alt.; 07.02.2018; direct observation.
Medium-large sized anteater. The coat is golden-brown. The tail is long and prehensile. This species is both terrestrial and arboreal. When walking the northern tamandua folds inwards the forefeet’s claws and places its weight on knuckles (
Family Dasypodidae Gray, 1821
Genus Dasypus Linnaeus, 1758
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'20"N, 085°02'25"W; 295 m alt.; 10.02.2018; direct observation.
Medium-sized armadillo. Characterised by an armoured body with 8 or 9 scutes. Distinguished from the other species of armadillo that occurs in Costa Rica, i.e., the northern armadillo Cabassous centralis Miller, 1899, by its close narrow ears, the long snout, an armoured tail and a noticeably arched carapace (
Family Cervidae Goldfuss, 1820
Genus Odocoileus Rafinesque, 1832
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'13"N, 085°03'27"W; 296 m alt.; 18.01.2018; direct observation.
Large-sized deer. The upperparts are pale to orange, the face shows conspicuous white and black markings. Long neck, head elongated, legs thin and strong. It usually carries its head high while moving. Only males have antlers, which are branched and longer than those of the other deer that occurs in Costa Rica, i.e., the brocket deer Mazama americana Erxleben, 1777 (
Genus Dicotyles Cuvier, 1816
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'16"N, 085°03'24"W; 293 m alt.; 30.01.2018; direct observation.
Medium-large sized mammal, often gregarious. The coat is dark grey grizzled, with light grey or pale tan. It has an inconspicuous pale tan collar that stretches from the top of the shoulder to the back of the cheeks. The triangular-shaped head is proportionally huge, and the snout is typically pig-like. The legs are short and thin. Young individuals are characterised by a reddish-brown fur (
Family Cebidae Bonaparte, 1831
Genus Cebus Erxleben, 1777
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°51'55"N, 085°03'40"W; 279 m alt.; 20.01.2018; direct observation.
Medium-sized primate, typically characterised by a black fur, except for chest, shoulders, and frontal part of the head. The face is pink coloured. Tail elongated and prehensile. It cannot be confused with other primates in the region. This species was formerly included in C. capucinus (Linnaeus, 1758), whose range is currently limited to South America (
Genus Alouatta Lacépède, 1799
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'10"N, 085°03'20"W; 294 m alt.; 15.01.2018; direct observation.
Medium-sized primate with dark fur and a brown to orange mantle on sides and rump, particularly marked in males. Face is black. Males show particularly visible white testicles. Frequently recorded thanks to its call, resembling a powerful roar in males (
Family Canidae von Waldheim, 1817
Genus Canis Linnaeus, 1758
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'19"N, 085°03'48"W; 384 m alt.; 11.02.2018; vocalisations.
Medium-sized canid, related to the Eurasian golden jackal Canis aureus (Linnaeus, 1758) both for morphology and eco-ethology (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'28"N, 085°03'27"W; 382 m alt.; 02.02.2019; direct observation.
Relatively small canid, smaller than the coyote, with rather short legs. The fur is mainly grey in the upperparts and brownish-rufous in the underparts; throat and cheeks white. The colours of the upper and lower sides are delimited by a brownish band. The ears are triangular and held erect, the tail is bushy with black tip. The throat is white and the face grey, and the sides of the neck, the abdomen and the base of the tail are reddish. This species is one of the few canids able to climb trees (
Genus Leopardus Gray, 1842
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°51'51"N, 085°03'35"W; 275 m alt.; 15.03.2021; direct observation.
Small to medium-sized spotted cat, smaller than the ocelot (L. pardalis; see below). It may be confused with L. pardalis, but the tail is proportionately longer (ca. 70% of head and body length), the eyes are larger and the snout is more protruding (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'19"N, 085°03'31"W; 334 m alt.; 15.01.2018; tracks.
Medium-sized spotted cat. The fur is usually short, pale sandy brown to pale yellow. The body is entirely covered with black spots, which on the flanks become elongated rosettes with brown centres and form a striped pattern on the sides. It may be confused with L. wiedii (see above), but larger and with a proportionately shorter tail, approximately 45% of the head and body length (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'24"N, 085°03'30"W; 362 m alt.; 15.02.2019; camera trapping.
Medium-sized cat. Elongated body, long tail and proportionately short legs. Fur varies in colour from black-grey to reddish-brown. The black phase jaguarundi can look similar to Eira barbara (see below) but can be distinguished by a thinner tail and the absence of a white patch on the throat (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'24"N, 085°03'30"W; 362 m alt.; 10.04.2018; camera trapping.
Large-sized cat. The only larger felid in Costa Rica is the jaguar Panthera onca (Linnaeus, 1758) which was present in the Wildlife Refuge until the 1970s (L. A. Mena Aguilar pers. obs.). The fur varies in colour from pale to reddish brown. Often black and white facial markings and a black tip on the tail. It may be confused with the red phase of H. yagouaroundi but is considerably larger (
Genus Conepatus Gray, 1837
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'11"N, 085°03'28"W; 295 m alt.; 21.01.2018; direct observation.
Medium-sized. The fur of the trunk is black with two distinctive white stripes that run from the forehead to the rump. The white stripes along the body size distinguish this skunk species from the southern spotted skunk (Spilogale angustifrons; see below). The tail is bushy, black at the base and then white. The snout is rather large, pig-like (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'09"N, 085°03'25"W; 306 m alt.; 31.03.2019; camera trapping.
Small-sized skunk, with short legs and elongated body. The fur is black, with white stripes and spots. The tail is proportionately short, mainly white, black at the base. Occasionally recorded in the study area in transitional forest. In Costa Rica it is known only from the northwestern part of the country (Reid and Gόmez Zamora 2022). Further remarks on the range of S. angustifrons are reported in the Discussion.
Genus Eira Hamilton Smith, 1842
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'27"N, 085°03'28"W; 378 m alt.; 09.02.2018; direct observation.
Medium-sized mustelid, with an elongated body and neck, short limbs, and a long, hairy tail. The fur is all dark except for a slightly paler head and a whitish patch on the throat. Easily distinguished from other carnivores recorded in the Wildlife Refuge (i.e., jaguarundi above and northern neotropical river otter, see below) by its dark bushy tail, and often arboreal habits (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'11"N, 085°03'31"W; 300 m alt.; 26.02.2018; camera trapping.
Medium-sized mustelid. The body is long and slim, the limbs are short, and the tail is long and stout, larger at its base. The fur is all dark brown, slightly paler around the throat and snout (
Genus Nasua Storr, 1780
COSTA RICA • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'10"N, 085°03'28"W; 296 m alt.; 15.01.2018; direct observation.
Medium-sized procyonid, with an elongated and rather slender body. The upperparts are chestnut to orange-brown, often paler on neck and shoulders. Throat and top of the muzzle are white. Typical white spots above or around the eyes. The muzzle is elongated with blackish snout. The tail is long, with a variable ring pattern, and is often held vertically (
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'25"N, 085°03'30"W; 370 m alt.; 20.04.2018; direct observation.
Medium-sized. The fur is golden yellow and rather woolly. The head is broad, with a short snout and small and rounded ears. The tail is long. Normally nocturnal and arboreal. The kinkajou is the only New World carnivore with a prehensile tail (Reid and Gόmez Zamora 2022). Recorded in the study area in different habitat types.
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'16"N, 085°03'22"W; 308 m alt.; 25.01.2018; camera trapping.
Medium-sized procyonid with a robust body and short legs. The face has a typical black mask, covering the eyes and cheeks and extending from the snout to the forehead and across the middle of the eyes. Another very similar species of Procyon, P. cancrivorus (Cuvier, 1798), is present in Costa Rica; this second species is mainly linked only to streams and beaches, and its range is limited to the central and southern Pacific slope of the country (
Family Heteromyidae Gray, 1868
Genus Heteromys Desmarest, 1817
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'04"N, 085°03'33"W; 286 m alt.; 13.02.2019; direct observation.
Small-sized. The upperparts are grey-brown to dark grey, while the underside, legs and feet are totally white or cream coloured. The tail length is typically equal to the head and body length, making this spiny pocket mouse unique compared to the three congeneric species found in Costa Rica, whose distributions do not overlap with its range (Reid and Gόmez Zamora 2022). Occasionally recorded in the study area in moist and transitional forests.
Genus Oryzomys Baird, 1857
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'10"N, 085°03'28"W; 297 m alt.; 13.02.2021; direct observation.
Small-sized rodent. The upperparts are brown to orange-brown with some blackish hair. The underside is pale, whitish. The ears are relatively small and the tail is rather long and bicolor. The feet are white dorsally (Reid and Gόmez Zamora 2022). Recorded on a few occasions in clearings within forested areas or close to buildings in the study area.
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'12"N, 085°03'27"W; 298 m alt.; 20.01.2023; direct observation.
Small-sized rodent, with a grey-brown fur, paler below. The skin of the hind feet is rather dark. The nose is blunt, the ears are round and hairy. The tail is shorter than the head and body length (Reid and Gόmez Zamora 2022). Recorded on a few occasions in clearings within forested areas or close to buildings in the Wildlife Refuge.
Genus Sciurus Linnaeus, 1758
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'09"N, 085°03'28"W; 296 m alt.; 19.01.2018; direct observation.
Small to medium sized rodent, with a long furry tail. The hair is extremely variable. Due to this characteristic at least seven subspecies are recognised in Costa Rica. All except E. v. melania – living in the southwestern part of the country – show a dark tail frosted with evident hairs, normally white to cream. The subspecies found in the Karen Mogensen Wildlife Refuge is S. v. atrirufus, characterised by a totally orange fur, except for a black midline on its back. This subspecies is endemic to southern Nicoya Peninsula (Mammal Diversity Database 2025). Some authors consider this species as belonging to genus Echinosciurus (
Genus Coendu Lacépède, 1799
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'33"N, 085°03'12"W; 397 m alt.; 20.04.2019; direct observation.
Medium-sized rodent with a black body and a pale-yellow head. Most of the hairs conceal yellowish spines, which are shorter and scarce underside. The head and ears are small, the nose is large and pink. The tail – thicker at the base – is prehensile, a unique feature among the Costa Rican rodents (
Genus Dasyprocta Illiger, 1811
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'12"N, 085°03'28"W; 397 m alt.; 18.01.2018; direct observation.
Medium-sized rodent, with a slim and elongated body. The ears are short, the tail is barely visible, and the hind feet are relatively longer than the forefeet. The fur varies in colour from reddish-brown to yellowish-brown. It can be distinguished from Cuniculus paca (see below) – another medium-to large-sized rodent widespread in Costa Rica – mainly by the lack of white spots and smaller size (
Genus Cuniculus Brisson, 1762
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'11"N, 085°03'29"W; 294 m alt.; 20.01.2018; direct observation.
The paca is the largest rodent of Central America, reaching a head and body length of more than 700 mm (
Family Emballonuridae Gervais, 1855
Genus Diclidurus Wied-Neuwied, 1819
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'16"N, 085°03'26"W; 302 m alt.; 18.01.2018; direct observation.
Medium-sized bat with a totally white fur. The face and ears are yellowish and the wing membrane is pink. It is characterized by a sac around tail but no wing sacs. Roosts alone or with maximum 3–4 individuals together, frequently under palm leaves. Not abundant, but regularly recorded in various forested habitats. During our study it was frequently found under the Research Station’s roof. Its stable presence in the Wildlife Refuge is of particular interest as this bat is uncommon throughout Costa Rica (
Genus Vampyrum Rafinesque, 1815
Costa Rica • Puntarenas Province, Karen Mogensen Wildlife Refuge; 09°52'14"N, 085°03'27"W; 296 m alt.; 10.12.2021; mist netting.
Very large bat, the biggest in the New World. The upperparts are dark brown to orange-brown, with a pale white line from shoulders to rump; the fur ventrally is greyish. Nose leaf is whitish and cup-shaped. The ears are large and rounded. The tail is absent and the feet and claws are robust and elongated. Normally roosts in family groups in hollow trees. The spectral bat is a predator that feeds on a wide variety of vertebrates, including marsupials, rodents, and several birds. Rare; recorded on a few occasions in the study area. This is one of the most relevant mammals of the Wildlife Refuge from a conservation perspective, as it is considered near threatened worldwide. A female with enlarged nipples was captured during a mist netting session, testifying to the successful reproduction of this species within the Wildlife Refuge or its surrounding areas (Reid and Gόmez Zamora 2022;
During the camera trapping survey from mid-January to mid-April 2019, we recorded a total of 1692 videos of 13 species (see above), 475 of which were independent detections, during the entire survey period of 102 days, corresponding to 537 trap-days. The accumulation curve of detected species showed that we reached a plateau and almost all species were captured within the first 200 trap-days (Fig.
The species most frequently recorded during camera trap survey were the southern collared peccary, the white-nosed coati, the Central American agouti, and the white-tailed deer (min: 49 – max: 200 independent detections; Table
Total number of detections for each species and Mean Jacobs Index (D) for each of the defined time bands of the diel cycle. The results of Watson’s test (U2) of the homogeneity of diel activity patterns calculated through Kernel Density function are provided; *, p-value < 0.001. Classification of species active mostly during the day, mostly at night or cathemeral, and trophic level.
| Species | Detections | D | U2 | Activity cycle | Diet | ||||
|---|---|---|---|---|---|---|---|---|---|
| Total | Independent | Sunrise | Day | Sunset | Night | ||||
| Southern collared peccary | 1003 | 200 | -0.42 | 0.21 | 0.42 | -0.45 | 1.64* | Mostly diurnal | Herbivore |
| White-nosed coati | 345 | 80 | -0.42 | 0.84 | -0.45 | -0.94 | 1.91* | Diurnal | Omnivore |
| Central American agouti | 154 | 80 | -0.05 | 0.57 | 0.40 | -1.00 | 1.41* | Mostly diurnal | Herbivore |
| White-tailed deer | 102 | 49 | -0.37 | 0.38 | 0.23 | -0.48 | 0.36* | Mostly diurnal | Herbivore |
| Common opossum | 20 | 15 | – | – | – | – | – | Nocturnal | Omnivore |
| Ocelot | 23 | 14 | – | – | – | – | – | Nocturnal | Carnivore |
| Northern tamandua | 13 | 11 | – | – | – | – | – | Mostly nocturnal | Carnivore1 |
| Paca | 11 | 11 | – | – | – | – | – | Nocturnal | Herbivore |
| Puma | 11 | 7 | – | – | – | – | – | Cathemeral | Carnivore |
| Tayra | 5 | 4 | – | – | – | – | – | Diurnal | Omnivore |
| Striped hog-nosed skunk | 3 | 3 | – | – | – | – | – | Nocturnal | Omnivore |
| Panamanian white-faced capuchin | 2 | 1 | – | – | – | – | – | Diurnal | Omnivore |
During the sampling period from mid-January to mid-April 2019, tourists were present at the Karen Mogensen Wildlife Refuge on 52 days and absent on 50 days. The total number of independent detections was 234 on days with tourists and 241 on days without tourists (Table
Number of detections divided into days with tourists and days without tourists in the Karen Mogensen Wildlife Refuge. Coefficients of overlap (∆; mean and 95% confidence intervals) and Watson’s two-sample test (Two-sample U2) between the activity patterns of species and species groups.
| Number of detections | ∆ [95% CI] | Two-sample U2 | ||
|---|---|---|---|---|
| Tourists present | Tourists absent | |||
| Species | ||||
| Southern collared peccary | 111 | 89 | 0.86 [0.77–0.92] | 0.06 |
| White-nosed coati | 37 | 43 | 0.82 [0.68–0.92] | 0.08 |
| Central American agouti | 39 | 41 | 0.79 [0.65–0.90] | 0.06 |
| White-tailed deer | 22 | 27 | 0.72 [0.56–0.86] | 0.05 |
| Group | ||||
| Whole community | 234 | 241 | 0.90 [0.84–0.94] | 0.07 |
| Diurnal species | 210 | 204 | 0.89 [0.82–0.93] | 0.08 |
| Nocturnal species | 27 | 27 | 0.78 [0.62–0.91] | 0.07 |
| Herbivores | 177 | 163 | 0.88 [0.81–0.93] | 0.05 |
| Omnivores and carnivores | 64 | 71 | 0.78 [0.67–0.88] | 0.07 |
For all species and groups of species based on the functional traits (activity cycle and diet), the presence or absence of tourists in the protected area did not cause any significant change in the diel activity patterns (Figs
Overlap in daily activity patterns of the whole mammal community and of the most abundant species in days with tourists and in those without tourists at the Karen Mogensen Wildlife Refuge from January to April 2019. Silhouette icons from PhyloPic.org: collared peccary by Steven Traver, white-nosed coati by Margot Michaud, white-tailed deer by Andy Wilson and Central American agouti by Graham Montgomery.
Overall, our research represents the first comprehensive investigation of the mammals of the Wildlife Refuge, revealing a high species richness that represents more than 25% of all mammal species documented for Costa Rica. We highlight that the species richness of non-volant mammals of the Wildlife Refuge is substantially in line with other neotropical areas of recent investigation (e.g., Da Silva et al. 2018;
Undoubtedly, the mammal community of the area consists of various small-sized terrestrial species, but during the investigation only three species belonging to two families (one Heteromyidae and two Cricetidae) have been occasionally recorded and identified. Dedicated investigations are needed for this component of the local mammalian diversity. On the contrary, regarding the chiropterans, although the results may be rather provisional, the record of 30 species indicates a high species richness, especially in relation to the small extension of the Wildlife Refuge. This number corresponds approximately to ca 25% of the Costa Rican species of bats known to date, with representatives of five out of nine families present in the country as a whole (
Some significant considerations regarding conservation issues can be drawn by our records. Two of the species reported, the mantled howler and the Panamanian white-faced capuchin, are globally Vulnerable and decreasing population trend (
Further remarks concern the chiropterans. The spectral bat Vampyrum spectrum (Fig.
The camera trapping led for a 4-month period allowed us to register 13 species in 537 trap-days. Taking into consideration the short period and the presence of four almost strictly arboreal species among the 30 non-volant included into the final checklist, we underscore the usefulness of this data collection method for stablishing baseline information on the mammal community of an area.
A number of studies based on or at least including this kind of data collection have been conducted in several forested neotropical locations in recent years, focusing on medium and large-sized mammals. Specifically for Costa Rica, a recent study by
The camera trapping survey allowed to gather information for studying the impact of tourism on the local mammal community. Most literature studies demonstrated that tourist activities alter the wildlife activity patterns. In a global review,
Our investigation underscores that the wilderness of the Wildlife Refuge is undergoing a period of renaissance since its creation in 1996, marked by the presence of a rich animal diversity with a diversified vegetation, similarly to other well-known and more popular parks and natural reserves in Costa Rica, all of which have greater extensions. As reported by a former investigation on the avifauna, several parts of the area have shown a clear regeneration process, with the growth of secondary forest surrounding the patches of primary forest already present before the birth of the Wildlife Refuge (Dal Zotto et al. 2017). The species richness reported here proportionately matches recent ornithological studies conducted in the area, which proved the presence of more than 220 bird species (Dal Zotto et al. 2017;
The present study allowed us to define and understand the current dynamics occurring between and among the mammal species of the Wildlife Refuge. This information is fundamental for future conservation plans, in order to permit a positive coexistence between the local human communities and the autochthonous fauna. Wildlife conservation can be effective only if innovative strategies at a local scale take into account the coupled nature of social and ecological systems (
We want to thank Arnulfo and Mery Quiros Salazar, the president Patricia Slump, and all the ASEPALECO (Asociación Ecológica Paquera, Lepanto y Cóbano) team, all the members of the association Foreste per Sempre OdV, Davide Iamonte and Esther Marneffe. Thanks to Luca Lombroso (Geophysical Observatory, University of Modena and Reggio Emilia) for providing us with the meteorological data. We express our gratitude to Dr. Bernal Rodríguez (Universidad de Costa Rica), Diana Pereira Brenes, Naidely Vidaurre Quesada, R. Andres Hernández Jimenez, Keilyn Castro Avendaño, Thomas McFarland, and all the researchers involved in the monitoring of chiropterans for sharing the data collected. Finally, we want to thank two anonymous reviewers who allowed us to substantially improve this manuscript, and Nathalie Yonow for the final editing.
The authors have declared that no competing interests exist.
No ethical statement was reported.
No use of AI was reported.
This work was partially supported by the grant of the Fund for Cooperation and Knowledge - University of Pavia, and was made possible thanks to the facilities of the “Italia-Costa Rica” Research Station, managed by the associations ASEPALECO and Foreste per Sempre OdV.
Conceptualization: FF, MDZ. Data curation: CAVE, FF, LV, MDZ, GR. Formal analysis: MDZ, FF, LV. Funding acquisition: FF, DS, MDZ. Investigation: FF, DML, ABB, LÁMA, CAVE, DS, GR, LV, MDZ. Methodology: GR, MDZ, FF, LV, CAVE. Project administration: MDZ, FF. Resources: LÁMA, GR, DS, MDZ, FF, CAVE, ABB. Software: LV, MDZ, DML, FF. Supervision: DS, MDZ. Validation: MDZ, FF, DS, LV, LÁMA, GR, CAVE. Visualization: MDZ, GR, LV, DS, FF, CAVE. Writing – original draft: FF, LV, MDZ. Writing – review and editing: FF, LV, MDZ, DML, CAVE, GR.
Matteo Dal Zotto https://orcid.org/0000-0003-1386-7626
All of the data that support the findings of this study are available in the main text.