Review Article |
Corresponding author: Vlada Peneva ( esn.2006@gmail.com ) Academic editor: Sergei Subbotin
© 2024 Tam T. T. Vu, Milka Elshishka, Anh D. Nguyen, Thi Mai Linh Le, Aleksandar Mladenov, Vlada Peneva.
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Citation:
Vu TTT, Elshishka M, Nguyen AD, Le TML, Mladenov A, Peneva V (2024) Two new species of genus Labronema Thorne, 1939 (Nematoda, Dorylaimidae) from natural parks of Vietnam with an identification key to the species with a medium-sized odontostyle. ZooKeys 1215: 1-26. https://doi.org/10.3897/zookeys.1215.128183
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Labronema Thorne, 1939 is a large and diverse dorylaimid genus with complicated taxonomy. Two new species, Labronema porosum sp. nov. and Labronema bidoupense sp. nov. from natural habitats in Vietnam were characterised both morphologically and molecularly (18S rDNA and 28 rDNA), and line drawings and microphotographs are provided. Phylogenetic analyses showed that the new species clustered together with Labronema ferox Thorne, 1939, the type species of the genus. The two new taxa belong to a group of Labronema species with medium body (L = 1.5–2.5 mm) and odontostyle (31–39 μm) length, and a lip region offset by a constriction. Based on morphological and molecular evidence, this study shows that the populations from Vietnam previously identified as L. glandosum Rahman, Jairajpuri, Ahmad & Ahmad, 1986 in fact represent L. porosum sp. nov. Evolutionary relationships of Labronema species are discussed. A key to the species of Labronema with a medium-sized odontostyle (31–39 μm) is provided as well as a list of the species of the genus considered valid.
Distribution, Dorylaimida, morphology, phylogeny, 18S rDNA, 28S rDNA
The genus Labronema was erected by
For several decades, a number of species, which were identified under Crassolabium Yeates, 1967, Thonus Thorne, 1974, Eudorylaimus Andrássy, 1959, Aporcelaimellus Heyns, 1965, Talanema Andrássy, 1991 have been transferred to or moved out Labronema (
During the last ten years only three new species of the genus have been described: L. mannai Dattaray, Roy & Gantait, 2015 and L. minimus Dattaray, Roy & Gantait, 2015 from India, and L. montanum Peña-Santiago & Abolafia, 2019 from Spain. Furthermore, several studies presented new information on some known species contributing to the improvement of the taxonomy of the genus.
Based on the morphological characters (species with a transverse vulva; a conoid, rounded or digitate tail, and non-contiguous ventromedian supplements) and molecular characterisation (D2-D3 expansion segments of 28S rRNA and 18S rRNA gene sequences),
Currently, the genus Labronema includes 47 species (see Suppl. material
Soil samples were collected from a pristine forest in the Natural Reserve Du Gia (Bac Me District, Ha Giang Province) and the National Park Bidoup-Nui Ba (Lac Duong District, Lam Dong Province), Vietnam. Nematodes were extracted from soil samples using modified Baermann funnel technique (
Genomic DNA was isolated from single individuals as described by
For reconstructing the phylogenetic relationships, analyses were based on 18S and 28S rDNA sequences. The newly obtained rDNA sequences were analysed using the BioEdit and aligned with sequences available in GenBank using the ClustalW alignment tool implemented in the MEGA 7 version 11.0 (
Labronema glandosum
sensu
Five females from the Natural Reserve Du Gia (Bac Me District, Ha Giang Province) in good condition.
Females (for measurements see Table
Measurements of females of Labronema porosum sp. nov. and females and males of Labronema bidoupense sp. nov. from Vietnam. All measurements are in μm (except L in mm), and in the form mean ± standard deviation with range.
Character | L. porosum sp. nov. | L. bidoupense sp. nov. | |||
---|---|---|---|---|---|
Type | holotype | paratypes | holotype | paratypes | |
Number of specimens | ♀ | 4 ♀♀ | ♀ | 5 ♀♀ | 6 ♂♂ |
L | 1.94 | 1.95 ± 0.1 (1.92–2.02) | 1.59 | 1.90 ± 0.1 (1.77–2.04) | 1.72 ± 0.2 (1.41–1.96) |
a | 22.5 | 19.7 ± 2.1 (18.2–21.1) | 23.4 | 22.4 ± 1.0 (20.9–23.3) | 22.6 ± 2.2 (19.7–25) |
b | 3.8 | 4.0 ± 0.1 (3.9–4.0) | 3.6 | 4.0 ± 0.1 (3.8–4.1) | 4.1 ± 0.3 (3.6–4.5) |
c | 75.4 | 73.5 ± 5.9 (69.3–77.6) | 58.9 | 69.2 ± 8.2 (57.8–77.2) | 62.9 ± 3.1 (58.8–67.8) |
c’ | 0.6 | 0.5 ± 0.1 (0.5–0.6) | 0.6 | 0.6 ± 0.1 (0.5–0.6) | 0.5 ± 0.03 (0.5–0.6) |
V% | 53 | 50.9 ± 1.6 (48.5–52) | 57 | 55. 6 ± 1.2 (54–57) | – |
Lip region diameter | 24 | 23.4 ± 0.8 (22–24) | 26 | 26.3 ± 0.9 (25–28) | 23.9 ± 1.0 (23–26) |
Odontostyle length | 37 | 35.9 ± 0.9 (35–37) | 39 | 38.3 ± 0.7 (37.5–39) | 34.5 ± 1.0 (33–36) |
Odontophore length | 42 | 42.2 ± 2.0 (40–44) | 42 | 43; 43; 43 | 50.7 ± 1.8 (48–53.5) |
Guiding ring | 21 | 20.7 ± 0.4 (20–21) | 22 | 22.5 ± 0.4 (22–23) | 20.1 ± 1.3 (18–21) |
Neck length | 510.5 | 491.1 ± 8.4 (484–500) | 443 | 470.9 ± 11.9 (458–487) | 422.9 ± 22.8 (388.5–450) |
Body diameter at: | |||||
- Pharynx base | 85 | 93.7 ± 10.2 (82.5–103) | 68 | 78.3 ± 2.4 (76–81) | 71.7 ± 7.5 (57–77) |
- Mid - body | 86 | 101.5 ± 8.3 (91–111) | 68 | 84.9 ± 3.5 (80.5–90) | 76.7 ± 10.9 (59–89.5) |
- Anus/cloacal aperture | 45 | 51.4 ± 4.9 (48–55) | 43 | 50.3 ± 2.4 (47–53) | 50.9 ± 3.6 (45–55) |
Distance vulva to anterior end | 1030 | 992.8 ± 14.6 (979–1011) | 912 | 1056.8 ± 63.7 (956–1124) | – |
Prerectum length | 92 | 87.3 ± 6.7 (82.5–92) | 93 | 98.3 ± 14.4 (89–123) | – |
Rectum length | 52 | 51.8 ± 6.6 (47–56) | 43 | 52.7 ± 3.1 (49.5–58) | – |
Tail length | 26 | 26.9 ± 1.2 (26–28) | 27 | 28.3 ± 2.5 (26–31) | 27.4 ± 3.0 (22–31) |
Spicule length | – | – | – | 77.4 ± 5.3 (68–83) | |
Ventromedian supplements | – | – | – | 13–15 |
Male. Unknown.
This species is very close to the Vietnamese populations identified as L. glandosum and described by
A pristine mountain area in the Natural Reserve Du Gia, Bac Me District, Ha Giang Province, Vietnam (22°43'5"N, 105°12'4"E, elevation 750 m a.s.l.)
The holotype female and four paratype females are deposited in the Nematode Collection of the Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Bulgaria, under an accession number IBER-BAS NTC 110.
After sequencing the obtained L. porosum sp. nov. rDNA sequence fragments were deposited in GenBank under the following accession numbers: PP084891 (18s rDNA) originating from NR Bac Me, Ha Giang, Vietnam, and PP060468 (NR Bac Me, Ha Giang, Vietnam), PP060470 (NP Cuc Phuong, Ninh Binh, Vietnam) (28S rDNA).
The species name reflects conspicuous ventral and lateral body pores characteristic of the species.
The new species is characterised by its medium-sized body (1.6–2.25 mm), and odontostyle (32–37 μm), weakly angular and offset by a constriction lip region, 21–24 μm wide, presence of a peculiar cuticular fold on the dorsal side of stoma, not differentiated uterus, a longitudinal vulva (V = 48.5–59%), and short and rounded tail (25–30 μm, c = 53–90, c’ = 0.5–0.6). In having medium body size (L = 1.5–2. 5 mm) and odontostyle (32–39 µm), and lip region offset by a constriction, the new species resembles L. andrassyi Gagarin, 1992, L. brevicauda Furstenberg, Heyns & Swart, 1993, L. gerlachi Andrássy, 2011, L. glandosum, and L. obesum Thorne, 1974. The new species can be differentiated from all of them by having a peculiar cuticular fold on the dorsal part of the stoma. Further, it differs from:
L. andrassyi by having: a somewhat shorter body length (1.6–2.25 vs 2.1–2.7 mm), narrower lip region (21–24 vs 36–38 μm), shorter prerectum and tail (1.6–2.1 vs 3.5–5.4 times longer than anal body diameter, 25–30 vs 35–45 μm respectively) (
L. brevicauda by having different shape of amphidial fovea (stirrup vs funnel shape), less robust odontostyle (5–6 vs 4 times as long as broad), absence of disc-shaped structure between pharynx and cardia vs present, smaller vulva (8–10 vs 13 or 14 µm long) stippled area large vs small (
L. gerlachi by having: a somewhat wider lip region (21–24 vs 21–22 μm), more posterior vulva position (48.5–59 vs 45–48%), rectum straight vs angular, a longer prerectum (1.6–2.1 vs 1.3–1.4 anal body widths) and shorter tail (25–30 vs 30–35 μm, c = 53–90 vs 51–53) (
L. glandosum by having: a longer body (1.6–2.25 vs 1.41–1.58 mm), absence of a disc-shaped structure between pharynx and cardia vs present, lateral chord ornamentation (without vs with gland-like structures), wider lip region (21–24 vs 20–21 μm), somewhat longer odontostyle (32–37 vs 32–35 μm) and tail (25–30 vs 21–24 μm) (
L. obesum by having: weakly vs strongly angular lip region, absence of a disc-shaped structure between pharynx and cardia vs present, tail longer (25–30 vs 37 μm, calculated from the drawing), and without vs with distinctive central core (
Six females, 6 males collected from National Park Bidoup-Nui Ba (Lac Duong District, Lam Dong Province) in good condition.
Females (for measurements see Table
Line drawings of Labronema bidoupense sp. nov. female A, B lip region (B holotype) C–E amphids (D holotype) F, G anterior genital branch H uterine Z-differentiation (holotype) I pharyngo-intestinal junction (holotype) J, K tail ends (J holotype). Scale bars: 25 µm (A–E, H–K); 50 µm (F, G).
Males. General morphology similar to that of the female, except for the genital system. After the fourth or fifth ventral pore a structure resembling an excretory pore (duct with cuticularised walls) present (at 96–105 μm from anterior end). Genital system di-orchic, composed of two opposed testes, anterior 207–234 μm and posterior 191–225 μm long. Sperm oval, measuring 5 μm. Ventromedian supplements contiguous 13–15 in number, ad-cloacal pair located at 9–13 μm from cloacal aperture. Spicules 1.4–1.8 times body diameter at cloacal aperture long, 5–6 times as long as wide, spicule head 0.8–1.4 times longer than wide, occupying 9–11% of total spicule length, and with slender walls, median piece narrow, occupying 29–36% of spicule maximum width, and reaching the posterior end, which is 5–6 μm broad, curvature 140–150°, ventral hump located at 20–23 μm or 23.5–30% of spicule length from its anterior end, posterior tip 4.5–6 μm wide. Lateral guiding piece slightly curved, leaf-shaped (Fig.
A pristine forest in the Bidoup mountain, Lac Duong District, Lam Dong Province, Vietnam (12°04'47"N, 108°39'29"E, elevation 2130 m a.s.l.).
The holotype female, three paratype females, and two paratype males are deposited in the Nematode Collection of the Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Bulgaria, under the accession numbers IBER-BAS NTC 111, 112, respectively. One paratype female and four paratype males are deposited in the Nematode collection of the Institute of Ecology and Biological Resources, Hanoi, Vietnam (accession number IEBR-FLN-DOR_04 and 05–08, respectively), one paratype female is deposited in the Wageningen Nematode Collection (WANECO), Wageningen, the Netherlands (WANECO accession number WT 4040), and one paratype female is deposited in the Nematode Collection of the U.S. Department of Agriculture (
The species is named after the Bidoup Mountain, the place from where it was recovered.
The new species is characterised by its medium-sizes body (1.59–2.04 mm long), lip region offset by a deep constriction and 25–28 μm wide, odontostyle 37.5–39 μm long, uterus complex (tripartite), longitudinal vulva (V = 54–57%), short and rounded tail (26–31 μm, c = 57.8–77.2, c’ = 0.5–0.6). Males with 68–83 μm long spicules, 5–6 times as long as wide and contiguous ventromedian supplements 13–15 in number, lateral piece leaf-shaped.
In having medium body size (L = 1.5–2.5 mm) and odontostyle (31–39 μm), and lip region offset by a constriction, the new species resembles L. andrassyi, L. brevicauda, L. gerlachi, L. glandosum, L. obesum and L. porosum sp. nov. The new species differs from:
L. porosum sp. nov. by having: a thicker body cuticle, wider lip region (25–28 vs 21–24 μm), slightly sigmoid vs straight odontostyle, longer odontostyle (37.5–39 vs 32–37 μm), a peculiar cuticular fold on the dorsal site of stoma absent vs present, shorter pharyngeal expansion (203–222 vs 220–237 μm), presence of disc-shaped structure between pharynx and cardia vs absence, complex vs simple uterus, males present vs absent;
L. andrassyi by having: a shorter body length (1.59–2.04 vs 2.1–2.7 mm), thicker body cuticle, narrower lip region (25–28 vs 36–38 μm), longer prerectum (1.7–2.4 vs 3.5–5.4 times longer than anal body diameter) and tail (26–31 vs 35–45 μm), males present vs absent (
L. brevicauda by having: a different number of dorsal pores at anterior end (4 or 5 vs 6 or 8), wider lip region (25–28 vs 21–25 μm), longer and less robust odontostyle (37.5–39 vs 32–35.6 μm and 6–7 vs 4 times as long as broad), complex vs simple uterus, males present vs absent (
L. gerlachi by having: a wider lip region (25–28 vs 21–22 μm), longer odontostyle (37.5–39 vs 33–35 μm), more posterior vulva position (54–57 vs 45–48%), rectum straight vs angular, shorter tail (26–28 vs 30–35 μm), males present vs absent (
L. glandosum by having: a differently shaped lateral chord (without vs with gland-like structures), a wider lip region (25–28 vs 20–21 μm), longer odontostyle (37.5–39 vs 32–35 μm) and tail (26–31 vs 21–24 μm), complex vs simple uterus, males present vs absent (
L. obesum by having: a shorter body length (1.59–2.04 vs 2.2 mm), longer odontostyle (37.5–39 vs 33 μm), tail without vs with distinctive central core, males present vs absent (
Molecular sequences of two specimens of L. porosum sp. nov. and one specimen of L. bidoupense sp. nov. were analysed in this study. After sequencing and editing, five sequences were obtained: a nearly full-length of 18S rRNA gene for L. porosum sp. nov., (1641 bp; PP084891) and L. bidoupense sp. nov., (1636 bp; GenBank: PP084892); two nearly full-length D2-D3 segment of 28S rRNA gene for L. porosum sp. nov., (828 bp; GenBank: PP060468, PP060470) and for L. bidoupense sp. nov. (856 bp; GenBank: PP060469). A BLAST search for matches to the partial 18S rDNA sequences revealed that L. porosum sp. nov. has a difference of 34 nt with L. ferox (AY552972), 24–40 nt with L. vulvapapillatum (AY284807 from The Netherlands, KC574385 from Iran), 32 nt with L. montanum (MK894247–MK894248) and 23 nt with the new species L. bidoupense sp. nov. The new species L. bidoupense sp. nov. has a difference of 34 nt with L. ferox (AY552972), 22–69 nt with L. vulvapapillatum (AY284807 from The Netherlands, KC574385 from Iran) and 36 nt with L. montanum (MK894247–MK894248). A BLAST search for matches the partial 28S rDNA sequences revealed that L. porosum sp. nov. has a difference of 76–78 nt with L. vulvapapillatum (AY592996–АY592997 from The Netherlands, ON685882 from Iran), 106 nt with L. montanum (MK894244–MK894246) and 31 nt with L. bidoupense sp. nov. Labronema bidoupense sp. nov. has 78 nt of difference with L. vulvapapillatum (AY592996–AY592997 from The Netherlands, ON685882 from Iran), 115 nt with L. montanum (MK894244–MK894246) from Spain. Labronema porosum sp. nov. population from Du Gia Nature Reserve, Bac Me district, Ha Giang Province (PP060468) was 100% identical with Labronema population from Cuc Phuong National Park, Ninh Binh Province (PP060470). The evolutionary relationships of the two new species as derived from the molecular analyses, are presented in the phylogenetic trees (Figs
The most recent identification keys of all Labronema species known by that time is the key by
1 | Body large, 3 mm or more | 2 |
– | Body < 3 mm | 5 |
2 | Vulva pre-equatorial – ♀ L = 3.4–3.6 mm, a = 45.3–46.03, b = 4.7–4.8, c = 109.8–113.2, V = 47–49% (India) | L. mannai Dattaray, Roy, Gantait, 2015 |
– | Vulva equatorial | 3 |
3 | Odontostyle nearly equal to lip region diameter, males present – ♀ L = 3.0–3.6 mm, a = 35, b = 4.1, c = 100, V = 50%, ♂ L = 3.0–3.5 mm, a = 43, b = 4.0–5.2, c = 100, ventromedian supplements 20–27 | L. ferox Thorne, 1939 (USA) |
– | Odontostyle longer than lip region diameter, males absent | 4 |
4 | Prerectum longer, 3–4 times anal body diameter, paravulvae present anterior and posterior to vulva – ♀ L = 3.2–4.0 mm, a = 45–50, b = 4.3–5.4, c = 119–154, V = 49–56% (India) | L. deoriaensis Khan, Jairajpuri & Ahmad, 1989 |
– | Prerectum shorter, twice as long as anal body diameter, paravulvae absent – ♀ L = 3.0–3.7 mm, a = 37–44, b = 3.8–4.9, c = 90–127, V = 51–54% (USA) |
L. thornei Ferris, 1968 |
5 | Lip region off set by weak depression – ♀ L = 2.4–3.0 mm, a = 28–33, b = 4.3–5.0, c = 90–103, V = 44–49%, ♂ L = 2.20–2.76 mm, a = 33–38, b = 3.9–4.5, c = 74–93, ventromedian supplements 21–23 (Ecuador) | L. aequatoriale Andrássy, 2011 |
– | Lip region off set by constriction | 6 |
6 | Body length 2.3–3 mm; lip region diameter as long as odontostyle length – ♀ L = 2.1–2.8 mm, a = 19.5–28, b = 4.0–4.3, c = 54.7–73.7, V = 51–57% (Russia) | L. andrassyi Gagarin, 1992 * |
– | Body length < 2.2 mm, lip region diameter shorter than odontostyle length | 7 |
7 | Vulva pre-equatorial – ♀ L = 1.7–2.0 mm, a = 17–19, b = 3.7–4.0, c = 51–53, V = 45–48% (Seychelles) | L. gerlachi Andrássy, 2011 |
– | Vulva equatorial | 8 |
8 | Lateral chords with gland-like structures – ♀ L = 1.4–1.6 mm, a = 19–22, b = 3.4–3.7, c = 59–71, V = 53–54% (India) | L. glandosum Rahman, Jairajpuri, Ahmad & Ahmad, 1986 |
– | Lateral chords without gland-like structures | 9 |
9 | Tail with distinctive central core – ♀ L = 2.2 mm, a = 25, b = 4.1, c = 60, V = 53% (USA) | L. obesum Thorne, 1974 |
– | Tail without central core | 10 |
10 | Female genital system tripartite, males present – ♀ L = 1.6–2.0 mm, a = 20.9–23.4, b = 3.6–4.1, c = 57.8–77.2, V = 54–57%, ♂ L = 1.4–2.0 mm, a = 19.7–25, b = 3.6–4.5, c = 58.8–67.8, ventromedian supplements 13–15 in number (Vietnam) | L. bidoupense sp. nov. |
– | Female genital system simple, males absent | 11 |
11 | The disc-like structure between the pharynx base and cardia present – ♀ L = 1.6–2.1 mm, a = 21.9–23, b = 3.7–4.0, c = 64–79, V = 50–52% (Madagascar) | L. brevicauda Furstenberg, Heyns & Swart, 1993 |
– | The disc-like structure between the pharynx base and cardia absent – ♀ L = 1.6–2.25 mm, a = 18–25, b = 3.5–4.6, c = 53–90, V = 49–59% (Vietnam) | L. porosum sp. nov. |
The integrative taxonomy approach used in the study of L. porosum sp. nov. and L. bidoupense sp. nov. from Vietnam contributes to the knowledge of the large and complex genus Labronema. The two species are very close morphologically and genetically and form a well-supported clade with the type species (18S rDNA tree Fig.
In both phylogeny trees of 18S and 28S rDNA (Figs
The 28S rDNA sequences from the two populations of Labronema from Du Gia Nature Reserve (Bac Me District, Ha Giang Province) and Cuc Phuong National Park (Ninh Binh Province) confirmed that the population previously recorded as L. glandosum from Cuc Phuong National Park (
It is very difficult to assess the phylogenetic relationships of the genus Labronema with other genera using the integrative approach due to the very low number of species studied, also affecting the reconstruction of the evolutionary history of dorylaimid groups of higher taxonomic ranks.
The authors have declared that no competing interests exist.
No ethical statement was reported.
The work is a part result of a research project NCXS01.04/23-25 funded by the Vietnam Academy of Science and Technology (VAST) and a research project “Studies on selected nematode taxa of the orders Mononchida and Dorylaimida from Vietnam and Bulgaria” funded by the Bulgarian Academy of Science (BAS), code number IC-VT/01/2023-2025. This study used facilities of the Institute of Biodiversity and Ecosystem Research – Bulgarian Academy of Sciences upgraded in the frames of the project DiSSCo-BG (Upgrade of the Research Infrastructure “Distributed System of Scientific Collections—Bulgaria”) funded by the National Roadmap for Research Infrastructures, Ministry of Education and Science of the Republic of Bulgaria.
Conceptualization: VP. Data curation: TTTV, ME. Formal analysis: TTTV, ME, TMLL. Funding acquisition: VP. Investigation: ME, VP, TTTV. Methodology: ADN. Project administration: VP, TTTV. Resources: TTTV, ADN, TMLL. Visualization: AM, VP. Writing - original draft: ME. Writing - review and editing: AM, TTTV, ADN, VP, TMLL.
Tam T. T. Vu https://orcid.org/0000-0003-1145-975X
Milka Elshishka https://orcid.org/0009-0002-3588-4566
Anh D. Nguyen https://orcid.org/0000-0001-9273-0040
All of the data that support the findings of this study are available in the main text or Supplementary Information.
An updated list of species of genus Labronema Thorne, 1939
Data type: docx