Research Article |
Corresponding author: Jing Che ( chej@mail.kiz.ac.cn ) Academic editor: Johannes Penner
© 2017 Haipeng Zhao, Junxiao Yang, Chunping Wang, Pipeng Li, Robert W. Murphy, Jing Che, Zhiyong Yuan.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Zhao H, Yang J, Wang C, Li P, Murphy RW, Che J, Yuan Z (2017) A new species of the genus Rana from Henan, central China (Anura, Ranidae). ZooKeys 694: 95-108. https://doi.org/10.3897/zookeys.694.12513
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A new species of brown frog Rana luanchuanensis Zhao & Yuan, sp. n. is described from Luanchuan County, western Henan, central China. The mitochondrial genealogy suggests that the new species is the sister taxon to the clade including R. amurensis and R. coreana, and is separated by uncorrected pairwise distances more than 12.5%. Morphologically, this new species differs from its congeners by a suite of characters. Analyses of partial sequences of cytochrome oxidase subunit I (COI) resolve the new species as a single matriline.
Brown frog, DNA barcode, genealogy, Rana luanchuanensis sp. n.
Frogs in the genus Rana Linnaeus, 1758 (type species: Rana temporaria Linnaeus, 1758), are commonly known as brown or wood frogs. Currently, the genus sensu
Five of seven clades of Rana (
Herein, the identity of a new brown frog is investigated by comparing morphological and molecular characteristics with Eurasian congeners. Analyses determine that the frogs constitute a new species, which is described here.
From 2013 to 2014, field surveys conducted in Luanchuan, western Henan resulted in the collection of 38 adult frogs. Following euthanizing, muscle or liver tissue was dissected from specimens and then preserved in 95% ethanol. Voucher specimens were fixed in 10% buffered formalin, and then later transferred to 70% ethanol. All specimens were deposited in the Kunming Institute of Zoology (
Voucher specimens, localities, and GenBank accession numbers for brown frogs, Rana. “*” = type locality. GBN = GenBank Accession No.
Species | Voucher No. | Locality | GBN (COI) | Source |
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Rana amurensis | KIZ070423558 | Shangzhi, Heilongjiang, China | JF939079 |
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Rana asiatica | XJ416 | Forty seven Tuan, Xinjiang, China | MF149925 | This study |
Rana arvalis | KIZ04239 | Haba River, Xinjiang, China | MF149926 | This study |
Rana arvalis | GBOL03518 | Upper Bavaria, Bavaria, Germany | KP697924 |
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Rana chaochiaoensis | KIZ06425 | Zhaojue, Sichuan, China* | JF939103 |
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Rana chensinensis | KIZRD05SHX01 | Huxian, Shanxi, China* | JF939080 |
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Rana coreana | MMS223 | South Korea | MF149928 | This study |
Rana coreana | KIZYPX2630 | Mt. Kunyu, Shandong, China* | MF149927 | This study |
Rana culaiensis | KIZSD080501 | Mt. Culai, Shandong, China* | JF939082 |
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Rana dybowskii | KlZ070423448 | Huangnihe, Jilin, China | JF939078 |
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Rana hanluica | KIZYPXll72 | Mt. Yangming, Hunan, China* | JF939099 |
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Rana huanrensis | SYNU040006 | Huanren, Liaoning, China* | JF939072 |
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Rana japonica | KIZYPX11775 | Japan | JF939101 |
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Rana jiemuxiensis | KIZ05263 | Jiemuxi NR, Hunan, China* | JF939090 |
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Rana kukunoris | CJ06102001 | Qinghai Lake, Qinghai, China* | JF939073 |
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Rana longicrus | KIZ15026 | Nanzhuang, Miaoli, Taiwan, China | JF969067 |
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Rana luanchuanensis sp. n. | KIZ047393 | Luanchuan, Henan, China* | MF149924 | This study |
Rana luanchuanensis sp. n. | KIZ047452 | Luanchuan, Henan, China* | MF149923 | This study |
Rana luanchuanensis sp. n. | KIZ047476 | Luanchuan, Henan, China* | MF149921 | This study |
Rana luanchuanensis sp. n. | KIZ047482 | Luanchuan, Henan, China* | MF149920 | This study |
Rana luanchuanensis sp. n. | KIZ047487 | Luanchuan, Henan, China* | MF149922 | This study |
Rana luteiventri | MVZ Herp 137417 | Missoula, Montana, USA | KU985757 |
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Rana omeimontis | KIZ02424 | Mt. Emei, Sichuan, China* | JF939069 |
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Rana zhenhaiensis | KIZ0803271 | Zhenhai, Zhejiang, China* | JF939065 |
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Rana zhengi | SCUM0405190CJ | Zhangcun, Hongya, Sichuan, China* | MF149929 | This study |
Total genomic DNA was extracted from tissues of five individuals using the standard phenol-chloroform protocols (
Amplification was performed in a 25 μL volume as follows: initial denaturation step for 5 min at 95 °C followed by 35 cycles of denaturation for 1 min at 94 °C, primer-specific annealing temperature of 46 °C for 1 min, extension for 1 min at 72 °C; final extension at 72 °C was conducted for 10 min. The primers Chmf4 (5’-TYTCWACWAAYCAYAAAGAYATCGG-3’) and Chmr4 (5’-ACYTCRGGRTGRCCRAARAATCA-3’) (
Interspecific and intraspecific mean uncorrected pairwise distances were computed in MEGA v.6.0 (
A total of 38 specimens was examined (Appendix
SVL (snout-vent length),
HDL head length,
HDW head width,
SL snout length,
EYE diameter of exposed portion of eyeball,
IOD interorbital distance,
IND internarial distance,
UEW upper eyelid width,
TYE tympanum outer diameter,
LAL lower-arm length,
HL hand length,
LAHL lower-arm and hand length,
LAW lower-arm width,
FEL femur length,
TL tibia length,
TW tibia width,
FTL length of foot and tarsus,
FOL foot length, and
IMTL inner metatarsal tubercles length.
Dissections on five male specimens determined the presence or absence of vocal sacs which can be seen by the presence of openings on the mouth floor. Vocal sacs that are externally visible are defined as “external” vocal sacs, those that cannot be distinguished by external observation are defined as “subgular”. All these morphological characters are defined following
Ten new sequences with 558 base pairs (bp) were obtained and deposited in GenBank (Accession numbers MF149920–MF149929; Table
The pairwise uncorrected p-distance (%) of the COI partial sequence used in this study (a, b). 1: Rana amurensis; 2: R. asiatica; 3. R. arvalis; 4: R. chaochiaoensis; 5: R. chensinensis; 6: R. coreana; 7: R. culaiensis; 8: R. dybowskii; 9: R. hanluica; 10: R. huanrensis; 11: R. japonica; 12: R. jiemuxiensis; 13: R. kukunoris; 14: R. longicrus; 15: R. luanchuanensis sp. n.; 16: R. omeimontis; 17: R. zhenhaiensis; and 18: R. zhengi. Bolded number highlights the distance between R. luanchuanensis sp. n. and the species of Rana analyzed in this study. “—” indicates genetic distance less than 1%.
(a) | |||||||||
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
1 | — | ||||||||
2 | 0.1562 | — | |||||||
3 | 0.1595 | 0.1113 | — | ||||||
4 | 0.1631 | 0.14 | 0.1326 | — | |||||
5 | 0.1523 | 0.1436 | 0.1452 | 0.1613 | — | ||||
6 | 0.1093 | 0.1609 | 0.1455 | 0.1553 | 0.1699 | 0.0164 | |||
7 | 0.1828 | 0.1364 | 0.1685 | 0.1308 | 0.1685 | 0.1843 | — | ||
8 | 0.1685 | 0.1311 | 0.138 | 0.1595 | 0.1326 | 0.1626 | 0.1774 | — | |
9 | 0.1756 | 0.14 | 0.1577 | 0.1272 | 0.1595 | 0.1824 | 0.0717 | 0.1685 | — |
10 | 0.1487 | 0.1329 | 0.1344 | 0.1541 | 0.0502 | 0.1726 | 0.1703 | 0.129 | 0.1649 |
11 | 0.1685 | 0.1382 | 0.147 | 0.1308 | 0.1416 | 0.1518 | 0.147 | 0.1541 | 0.1308 |
12 | 0.172 | 0.14 | 0.1613 | 0.1398 | 0.1559 | 0.1798 | 0.0771 | 0.1756 | 0.0771 |
13 | 0.1613 | 0.1346 | 0.1487 | 0.1541 | 0.0609 | 0.1698 | 0.1703 | 0.1308 | 0.1649 |
14 | 0.1792 | 0.1472 | 0.1738 | 0.1434 | 0.1756 | 0.1852 | 0.0287 | 0.1792 | 0.0878 |
15 | 0.1254 | 0.1346 | 0.1523 | 0.1523 | 0.1452 | 0.1464 | 0.1649 | 0.1505 | 0.1703 |
16 | 0.1631 | 0.1436 | 0.1487 | 0.1487 | 0.1613 | 0.1725 | 0.0806 | 0.1505 | 0.0771 |
17 | 0.1846 | 0.1508 | 0.1685 | 0.138 | 0.1667 | 0.1969 | 0.0323 | 0.181 | 0.0806 |
18 | 0.1667 | 0.1382 | 0.1416 | 0.1452 | 0.1434 | 0.1716 | 0.1703 | 0.1523 | 0.1559 |
(b) | |||||||||
10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | |
11 | 0.1416 | — | |||||||
12 | 0.1613 | 0.1487 | — | ||||||
13 | 0.0484 | 0.1452 | 0.1577 | — | |||||
14 | 0.181 | 0.1541 | 0.086 | 0.181 | — | ||||
15 | 0.1434 | 0.1362 | 0.1792 | 0.1487 | 0.1738 | — | |||
16 | 0.1649 | 0.1559 | 0.0932 | 0.1559 | 0.0932 | 0.1559 | — | ||
17 | 0.181 | 0.1416 | 0.086 | 0.181 | 0.043 | 0.1667 | 0.0806 | — | |
18 | 0.1577 | 0.1667 | 0.1667 | 0.1541 | 0.1774 | 0.1685 | 0.1649 | 0.1703 | — |
Genealogical reconstructions by BI and ML were nearly identical (Figure
Morphological and morphometric analyses of the frogs (Table
Linear measurements (in mm) of Rana luanchuanensis. The abbreviations are provided in text.
Character | Measurements | ||
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♂ | ♀ | ||
SVL | Range | 27.2–33.0 ± 1.87 | 23.7–41.2 ± 4.25 |
HDL | Range | 7.9–10.5 ± 0.69 | 8.5–13.5 ± 1.25 |
HDW | Range | 9.7–11.8 ± 0.63 | 9.7–15.2 ± 1.47 |
SL | Range | 4.3–5.7 ± 0.34 | 4.1–6.9 ± 0.7 |
EYE | Range | 2.9–4.3 ± 0.35 | 3.3–5.3 ± 0.55 |
IOD | Range | 2.4–3.4 ± 0.3 | 2.5–4.3 ± 0.39 |
IND | Range | 2.3–3.6 ± 0.29 | 2.5–3.4 ± 0.27 |
UEW | Range | 1.9–2.6 ± 0.26 | 1.9–3.1 ± 0.36 |
TYE | Range | 1.4–2.4 ± 0.25 | 1.4–3.2 ± 0.44 |
LAL | Range | 5.9–7.4 ± 0.44 | 5.3–8.5 ± 0.78 |
HL | Range | 7.2–9.1 ± 0.54 | 6.8–11.2 ± 1.11 |
LAHL | Range | 13.3–15.3 ± 0.6 | 11.7–18.2 ± 1.7 |
LAW | Range | 2.3–3.6 ± 0.4 | 1.7–3.8 ± 0.5 |
FEL | Range | 13.9–18.2 ± 1.35 | 13.5–21.7 ± 2.1 |
TL | Range | 15.5–20.3 ± 1.35 | 14.7–22.8 ± 2.18 |
TW | Range | 2.5–4.1 ± 0.52 | 2.1–4.9 ± 0.7 |
FTL | Range | 21.0–26.4 ± 1.36 | 19.7–33.3 ± 3.26 |
FOL | Range | 15.8–18.6 ± 0.93 | 13.2–23.4 ± 2.52 |
IMTL | Range | 1.7–2.4 ± 0.23 | 1.4–2.8 ± 0.28 |
KIZ016090, an adult male, collected by Haipeng Zhao and Ruiliang Wang on 4 May 2014 in Tongyi River near the village of Hanqiu (33.80°N, 111.80°E, elevation 810 m a.s.l.), Miaozi town, Luanchuan County, western Henan, central China.
KIZ047446–KIZ047453, KIZ016089, with the same collection data as the holotype; KIZ047383, with the same locality as the holotype, collected on 16 November 2013; KIZ047470–KIZ047487, KIZ016086–KIZ016088, and KIZ016091 from Wangping village, Tantou town, Luanchuan County (33.95°N, 111.73°E, elevation 530 m a.s.l.) in the same river, collected on 5 May 2014; KIZ0093, KIZ0099, KIZ0101, KIZ0104, and KIZ0105, collected by Li Ding and Xiaobei Zhang from nearby Miaozi town (33.75°N, 111.72°E, elevation 1070 m a.s.l.) on 15 August 2007. A total number of 37 adult individuals included 12 males and 25 females.
A small-sized species (SVL 27.2–33.0 mm in males; 23.7–41.2 mm in females) of Rana; temporal fold distinct; dark mask covering tympanum; curved dorsolateral fold thin, extending from posterior canthus to groin; tips of fingers not expanded; skin smooth with few small granules on dorsum and legs, distinct large tubercles absent; head length slightly less than head width; vocal sac absent in males; white rictal gland absent on the upper lip; ventral surface of throat, chest, and belly white with irregular black spots; poster part of abdomen and ventral surface of thighs and limbs reddish; distinct transverse grayish brown bars on dorsal surface of fingers and toes, lower arms, tarsus, thighs, and tibia; toes two-thirds webbed; gray-blackish nuptial pad prominent and forming two groups in males, with minute nuptial spines; three metacarpal tubercles, inner one close to the nuptial pad at the base of finger I, the two outer ones closed together at the base of fingers III and IV.
SVL 32.8 mm. Head slightly shorter than broad (HL\HW = 0.87), snout pointed and projecting; snout length much longer than eye diameter (SL\EYL = 1.35); interorbital space equal to internasal space and both wider than upper eyelid width; tympanum diameter about half of eye diameter, loreal region concave, sloping outwards; vomerine teeth in short oblique series, anterior edges in line with centers of choanae; tongue deeply notched posteriorly; vocal sacs absent.
Forearm robust, fingers slender, unwebbed; tips of fingers not expanded, with no circum-marginal grooves; relative length of fingers: II < I < IV < III; one prominent subarticular tubercle on fingers I and II, two small subarticular tubercles on fingers III and IV; distinct supernumerary tubercles below the base of fingers; inner metacarpal tubercle strong and large, ovoid, close to the nuptial pad at base of finger I; two outer tubercles close together at base of fingers III and IV, flat, long elliptic and obvious. Nuptial pad covered densely by small grey-blackish spines and divided into two groups, one near tip larger than the other one.
Hindlimb long (8.7 mm), heels well overlapping when limb held at right angles to body; tibiotarsal articulation of adpressed limb reaching far anterior to eyes; inner metatarsal tubercle weak and small, smooth, about 0.37 of the first toe; tips of toes similar to fingers; relative length of toes: I < II < III < V < IV; toes two-thirds webbed, webbing formula: I 1–2 II 1–2 ½ III 2–3 IV 3–1 V; web of toe III reaching the first joint from tip and on other toes nearly extending to tip; subarticular tubercles small, but visible; distinct supernumerary tubercles below the base of toes; inner metatarsal tubercle ovoid, small but distinct; outer metatarsal tubercle absent.
Skin rather smooth, except for some small granules near vent and ventral femoral region; temporal fold distinct, extending from posterior margin of eye above and behind tympanum to above arm insertion, a large triangular black and brown patch behind the eye and anterior to temporal fold; thin dorsolateral fold from posterior canthus to groin, obviously curved at upper tympanum and crossing temporal fold; ventral surface smooth, reddish; few granules on the posterior ventral surface of thighs.
In life, dorsum gray-brown, with few scattered black spots and grayish brown blotches; dorsolateral fold reddish brown and darker than ground dorsal color; distinct grayish brown crossbars on dorsal surface of fingers and toes, lower arms, tarsus, thighs and tibia; narrow black stripe on edge of canthus rostralis from tip of snout along margin of upper eyelid and across eye continuing along supratympanic ridge; large triangular black and brown patch behind the eye and anterior to temporal fold; lower lip whitish with black spots and bars; throat, chest, and belly white with irregular black spots; poster part of abdomen reddish; ventrally limbs reddish with faint yellow nebulous mottling; faint yellow granules on ventral thigh; foot webbing brownish red with few indistinct black spots; nuptial pad blackish gray. In preservative, dorsal surface dark gray-brown with slightly paler limbs (Fig.
Holotype (KIZ016090) of Rana luanchuanensis sp. n. A Dorsal view B Ventral view C Details of left hand showing the nuptial pad D Details of left foot showing the extent of webbing. Scale bar 10 mm.
All specimens of the new species were collected in shallow slow-flowing streams with large gravel beds (Figure
Morphometric data were summarized in Table
The specific epithet “luanchuanensis” is in reference to the type locality.
Rana luanchuanensis sp. n. closely resembles the R. amurensis Boulenger, 1886 and R. coreana Okada, 1928, within the R. amurensis species group, but differs from them by the following morphological characters: 1) skin smooth (vs. many tubercles on the dorsum and dorsolateral surfaces of R. amurensis and many tubercles on the dorsolateral surface of R. coreana); 2) upper white rictal gland absent (vs. present in R. amurensis and R. coreana); 3) small size, SVL 27.2–33.0 mm in males and 23.7–41.2 mm in females (vs. SVL 48.8–66.4 mm in males and 51.2–70.4 mm in females of R. amurensis); 4) nuptial pad forming two groups in males (vs. nuptial pad forming four groups in males of R. amurensis); 5) toes two-thirds webbed (vs. toes half webbed in R. coreana); 6) transverse grayish brown bars on dorsal surface of fingers and toes, lower arms, tarsus, thighs, and tibia (vs. absent in R. coreana); and 7) ventral surface of throat, chest, and belly white with irregular black spots (vs. absence of black spots in R. coreana).
The species is currently only known from Luanchuan, Henan, China.
We thank Li Ding and Yang Lu for specimens collection or providing tissues; Yunyu Wang and Jieqiong Jin for laboratory work; and Yongzhao Huang for providing morphometric data of R. amurensis. Weiwei Zhou and Xiaohong Chen provided valuable comments during the manuscript preparation. This work was supported by the grants from the National Natural Science Foundation of China (31401966), the Animal Branch of the Germplasm Bank of Wild Species, Chinese Academy of Sciences (the Large Research Infrastructure Funding), and Innovation Scientists and Technicians Troop Construction Projects of Zhengzhou City (131PLJRC654), the first-class discipline construction project for Forestry in Yunnan (No.51600625).