Research Article |
Corresponding author: Catherine S. McFadden ( mcfadden@hmc.edu ) Academic editor: James Reimer
© 2024 Catherine S. McFadden, Yehuda Benayahu, Kaveh Samimi-Namin.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
McFadden CS, Benayahu Y, Samimi-Namin K (2024) A new genus of soft coral (Octocorallia, Malacalcyonacea, Cladiellidae) and three new species from Indo-Pacific coral reefs. ZooKeys 1188: 275-304. https://doi.org/10.3897/zookeys.1188.110617
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Molecular systematic studies of the anthozoan class Octocorallia have revealed widespread incongruence between phylogenetic relationships and taxonomic classification at all levels of the Linnean hierarchy. Among the soft coral taxa in order Malacalcyonacea, the family Alcyoniidae and its type genus Alcyonium have both been recognised to be highly polyphyletic. A recent family-level revision of Octocorallia established a number of new families for genera formerly considered to belong to Alcyoniidae, but revision of Alcyonium is not yet complete. Previous molecular studies have supported the placement of Alcyonium verseveldti (Benayahu, 1982) in family Cladiellidae rather than Alcyoniidae, phylogenetically distinct from the other three genera in that family. Here we describe a new genus, Ofwegenum gen. nov. to accommodate O. verseveldti comb. nov. and three new species of that genus, O. coronalucis sp. nov., O. kloogi sp. nov., and O. colli sp. nov., bringing the total number of species in this genus to four. Ofwegenum gen. nov. is a rarely encountered genus so far known from only a few locations spanning the Indian and western Pacific Oceans. We present the morphological characters of each species and use molecular data from both DNA barcoding and target-enrichment of conserved elements to explore species boundaries and phylogenetic relationships within the genus.
DNA barcoding, molecular phylogeny, new combination, northern Red Sea, Ofwegenum gen. nov., Oman, Réunion, sclerites, target-enrichment, taxonomy, ultraconserved elements
Zooxanthellate soft corals belonging to the octocorallian order Malacalcyonacea are among the most common, conspicuous, and ecologically important sessile organisms on shallow-water coral reefs throughout the Indo-Pacific; on some reefs, total percent cover of soft corals may exceed that of the reef-building scleractinian corals (
Among the species of Metalcyonium transferred by
Here, we re-examine the type material and establish a new genus for M. verseveldti. In addition, we describe three new species of the genus from the Indian and western Pacific Oceans (Fig.
Distribution of the Ofwegenum gen. nov. species in the Indo-Pacific region. The colour shades represent the different marine realms. Yellow = West Indo-Pacific, blue = Central Indo-Pacific, red = East Africa, green = temperate Australasia; PG = Persian Gulf, AS = Arabian Sea, RS = Red Sea, GO = Gulf of Oman, OM = Oman.
The study examined the holotype and paratypes of Metalcyonium verseveldti Benayahu, 1982 and other relevant material deposited at the museums listed below. Morphological features, including shape and dimensions of the preserved colonies, were recorded; terminology follows
DNA was extracted from EtOH-preserved tissue samples using a DNeasy Blood & Tissue Kit (Qiagen, Inc.). Fragments of the mitochondrial mtMutS and COI (+igr1) genes and nuclear 28S rDNA were amplified by polymerase chain reaction (PCR) and sequenced using published primers and protocols (
GenBank accession numbers for specimens of Ofwegenum gen. nov. and other genera of Cladiellidae included in molecular analyses (Fig.
Species | Museum | Locality | mtMutS | 28S | COI | UCEs |
---|---|---|---|---|---|---|
Ofwegenum coronalucis |
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Oman | NA | OR483157 | OR487130 | NA |
SMNHTAU_Co_39048 | Oman | OR487121 | OR483155 | OR487131 | SAMN 38083212 | |
|
Oman | OR487122 | OR483156 | OR487134 | SAMN 38083211 | |
|
Oman | OR487123 | OR483158 | OR487132 | NA | |
BOMAN-09174 | Oman | OR487124 | OR483159 | NA | NA | |
|
Oman | OR487125 | OR483160 | OR487133 | NA | |
Ofwegenum aff. coronalucis | SMNHTAU_ Co_38223 | Aquarium trade, USA | OR487121 | OR483157 | OR487130 | SAMN 38083213 |
Ofwegenum verseveldti | SMNHTAU_ Co_33097 | Israel | GU356012 | JX991219 | GU355978 | SAMN 38083214 |
Ofwegenum kloogi | SMNHTAU_ Co_34426 | Reunion | OR487117 | OR483152 | OR487128 | SAMN 38083210 |
SMNHTAU_ Co_38229 | Reunion | OR487118 | OR483153 | NA | NA | |
Ofwegenum colli |
|
Australia | OR487120 | NA | NA | NA |
Aldersladum jengi | SMNHTAU_ Co_33607 | Taiwan | JX991144 | JX991201 | JX991220 | NA |
Aldersladum sodwanum | SMNHTAU_ Co_31520 | Kenya | JX991193 | JX991213 | JX991236 | NA |
Cladiella australis | SMNHTAU_ Co_36313 | Taiwan | MH516863 | MH516878 | MH516513 | SAMN 38083203 |
SMNHTAU_ CO_36912 | Taiwan | MH516570 | MH516881 | MH516515 | SAMN 38083204 | |
SMNHTAU_ Co_36987 | Taiwan | MH516571 | MH516882 | MH516516 | SAMN 38083205 | |
SMNHTAU_ Co_36042 | Madagascar | OR487126 | OR483164 | OR487135 | SAMN 38083206 | |
Cladiella bottae | SMNHTAU_ Co_34648 | Taiwan | JX991145 | JX991204 | JX991223 | NA |
Cladiella kashmani | SMNHTAU_ Co_32334 | Kenya | JX991195 | JX991215 | JX991238 | NA |
SMNHTAU_ Co_32246 | Kenya | JX991194 | JX991214 | JX991237 | NA | |
Cladiella pachyclados | SMNHTAU_ Co_33604 | Taiwan | JX991146 | JX991206 | JX991225 | NA |
SMNHTAU_ Co_35507 | Palau | JX991197 | JX991216 | JX991240 | NA | |
Cladiella sphaerophora | SMNHTAU_ Co_34132 | Israel | GQ342471 | JX203653 | GQ342386 | NA |
Cladiella tuberculoides | SMNHTAU_ Co_34686 | Taiwan | JX991227 | JX991148 | JX991208 | NA |
SMNHTAU_ Co_34642 | Taiwan | JX991226 | JX991147 | JX991207 | NA | |
Cladiella tuberosa | SMNHTAU_ Co_34669 | Taiwan | JX991149 | JX991209 | JX991228 | NA |
Klyxum sp. |
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N. Marianas | OR487127 | OR483162 | NA | SAMN 38083207 |
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Australia | NA | OR483163 | NA | SAMN 38083208 | |
CKT396 | Taiwan | NA | OR483161 | NA | SAMN 38083209 | |
Klyxum adii | SMNHTAU_ Co_32636 | Kenya | JX991199 | JX991217 | JX991242 | NA |
Klyxum flaccidum | SMNHTAU_ Co_32221 | Kenya | JX991200 | JX991218 | JX991243 | NA |
Klyxum utinomii | SMNHTAU_ Co_34639 | Taiwan | JX991151 | JX991212 | JX991232 | NA |
SMNHTAU_ Co_34127 | Israel | GQ342476 | JX203654 | GQ342392 | NA |
Preliminary phylogenetic analyses of each gene region using PhyML (
For one or a few representatives of each species and several outgroup taxa (Cladiella, Klyxum), DNA was quantified using a Qubit 2.0 fluorometer and quality-checked (for 260:230 and 260:280 ratios) using a NanoDrop spectrophotometer. DNA samples (300–1000 ng) were sent to Arbor Biosystems (Ann Arbor, MI) for library preparation, target enrichment and sequencing. Libraries were prepared using a Kapa Hyper Prep Kit (Kapa Biosystems) with dual-indexed iTru adaptors. myBaits protocol v. 4 (Arbor Biosystems) was used to target and enrich pools of 8 libraries using the octocoral-v. 2 bait set of
Sequences were processed using the phyluce pipeline (
Subphylum Anthozoa Ehrenberg, 1831
Class Octocorallia Haeckel, 1866
Order Malacalcyonacea McFadden, van Ofwegen & Quattrini, 2022
Family Cladiellidae McFadden, van Ofwegen & Quattrini, 2022
Soft corals with encrusting or capitate growth forms; small (1–2 cm diameter), stalked capitula may be joined basally to form a low mat. Polyps monomorphic, non-retractile but contractile; pinnules with or without terminal branches. Coenenchymal sclerites are spindles and rods, smooth but with low, simple tubercles and areas of thickening forming concentric, raised rings. Polyp sclerites similar, usually arranged ‘en chevron’ in the polyp body, lacking a distinct collaret-and-points arrangement. Tentacles and pinnules contain numerous platelets and flattened rods (i.e., finger- biscuits, see
Metalcyonium verseveldti Benayahu, 1982: 197–201.
The generic name Ofwegenum (gender: neuter) honours the late Dr. Leendert P. van Ofwegen (1953–2021), a close friend and an eminent octocoral taxonomist (
1 | Colonies encrusting, not capitate and without stalk | O. kloogi |
– | Colonies capitate, with stalk | 2 |
2 | Crosses and irregular sclerites up to 0.05 mm, around the polyp mouth | O. coronalucis |
– | No sclerites around the polyp mouth | 3 |
3 | Coenenchymal sclerites up to 0.70 mm long, tentacle sclerites mostly figure-eight platelets | O. verseveldti |
– | Coenenchymal sclerites up to 0.40 mm long, tentacle sclerites mostly flattened rods or bone-shaped platelets up to 0.15 mm long | O. colli |
Holotype. Australia • Queensland, N.E. Bay Great Palm Island; 18.7500°S, 146.6500°N; 6–7 m depth; 22 April 1981; coll. J. Coll; silty bottom, on a dead coral;
Paratypes. Australia • 7 colonies, same data as holotype;
The holotype is a fragment of a colony measuring 14 by 13 mm (Fig.
The tentacles and pinnules contain numerous platelets and flattened rods (i.e., finger-biscuits, see
The ethanol-preserved colony is cream.
The paratype colony
This species is capitate with smaller bud-like capitula occasionally emerging from the stalk. The sclerites of the paratypes correspond to those of the holotype but differ a bit in size. This species has the largest tentacle sclerites among the congeners, up to 0.15 mm long (Figs
Queensland, Australia.
The species is named after the collector of the material, Prof. John Coll of James Cook University, North Queensland, a renowned chemical ecologist who has contributed prominently to the knowledge of soft corals.
Holotype. Oman • Dhofar, Mirbat, Michel’s Reef; 16.9433°N, 54.7300°E; 25–30 m depth; 20 January 2022; coll. C.S. McFadden and K. Samimi-Namin;
Paratype. Oman • same data as holotype; SMNHTAU_Co_39048 (BOMAN–08351).
Oman • Dhofar, Mirbat, Frankincense; 16.9662°N, 54.6900°E; 24–30 m depth; 19 Jan 2022; coll. C.S. McFadden;
The holotype consists of several fragments of a colony; the largest is 10 mm in diameter (Fig.
Morphological details of live Ofwegenum gen. nov. polyps A, B close up of Ofwegenum coronalucis sp. nov., holotype,
Preserved type colonies of Ofwegenum gen. nov. A O. colli sp. nov., holotype
Sclerites of the coenenchyme are spindles and rods up to 0.40 mm long with low, simple tubercles or areas of thickening forming concentric, raised rings (Fig.
The tentacles and pinnules contain numerous platelets and flattened rods (i.e., finger-biscuits) up to 0.10 mm long (Fig.
In life, colonies appear brown with blue-green tentacles. After preservation in ethanol, they are creamy white. Sclerites colourless.
SMNHTAU_Co_38223 comes from the aquarium trade in the U.S. Its commercial source is assumed to be Jakarta, Indonesia (A. Parrin, pers. comm. 12 Aug 2013), but the original collection locality remains unknown. This colony is tentatively assigned as O. aff. coronalucis based on its sclerite features and genetic similarity to this species (Fig.
Ofwegenum coronalucis sp. nov. differs from its congeners in having irregularly shaped sclerites with side notches or side branches around the polyp mouth that reflect light (Figs
Oman.
The species name is from the Latin corona (crown) and lucis (of light), referring to the reflective ring of sclerites around the polyp mouth in the live specimens.
Holotype. La Réunion • Saint-Paul, Cap la Houssaye; 21.0174°S, 55.2376°E; 17 m depth; 8 April 2008; SMNHTAU_Co_34426.
Paratype. La Réunion • 13 colonies/fragments; same data as holotype; SMNHTAU_Co_38229.
The holotype is an encrusting colony, measuring 28 by 25 mm, attached to a calcareous fragment by a thin spreading base (<1 mm thick). The polypary features several narrow grooves (Fig.
The coenenchyme sclerites are spindles and rods up to 0.50 mm long, with low, simple tubercles or areas of thickening forming concentric, raised rings (Fig.
The tentacles and the pinnules contain numerous platelets and flattened rods (i.e., finger-biscuits) up to 0.07 mm long (Fig.
In life the expanded tentacles are pale grey with an underlying bluish tint. The polyps have a blue mouth opening and blue line along the tentacles (Fig.
Paratype SMNHTAU_Co_38229 has slightly longer tentacle sclerites and shorter coenenchymal sclerites compared to the holotype (Fig.
This species features a distinct encrusting growth form and surface grooves on its polypary, most probably indicating a process of colony fission (Fig.
La Réunion.
The species is named after the late Prof. Yoel Kloog, biochemist, former Dean of the Faculty of Life Sciences, Tel Aviv University, in honour of his friendship and lifetime contributions to science.
Holotype. Egypt • Marsa Barieka, northern Red Sea, southern tip of Sinai Peninsula; 27.7500°N, 34.2333°E; 12 m depth; 3 July 1978; coll. Y. Benayahu; SMNHTAU_Co_25554 (previously NS16770).
Paratypes. Egypt • 33 colonies, same data as holotype; SMNHTAU_Co_25544 (previously NS16771) • same data as holotype; RMNH COEL. 13903.
Israel• Eilat, northern Gulf of Aqaba, mesophotic reef across from the Inter University Institute for Marine Sciences (IUI); 60 m depth; 20 September 2005; coll. S. Eibinder; SMNHTAU_Co_33097.
(modified after
The tentacles and pinnules include numerous crosses, flattened rods (i.e., finger-biscuits) and platelets up to 0.10 mm long (Fig.
In life the coenenchyme is uniquely dark blue. The expanded polyps are pale blue, with brown pinnules that reflect the presence of symbiotic algae. The ethanol-preserved colony is creamy yellow, and the tentacles are pale cream.
The paratype colonies and the other material vary in size; some colonies feature two separate polyparies on a common stalk (Fig.
Ofwegenum verseveldti comb. nov. is the only species with tentacle sclerites composed mainly of asymmetrical platelets resembling a figure-eight (Figs
The current findings correspond to the original description of M. verseveldti (see
It should be noted that despite the extensive soft coral research conducted in the Gulf of Aqaba and and other parts of the Red Sea, since the collection of the type material of O. verseveldti comb. nov. it has been found only once at a mesophotic depth on the Eilat reef (see above: SMNHTAU_Co_33097) and is also only infrequently observed by some professional divers in that region. This species should thus be considered as a rare soft coral in the Red Sea.
Northern Red Sea.
Sequences for mtMutS (735 bp), igr1 + COI (909 bp) and 28S rDNA (800 bp) were obtained for seven specimens representing three of the four species of Ofwegenum plus the species from the aquarium trade (SMNHTAU_Co_38223) (Table
All phylogenetic analyses separated Ofwegenum gen. nov. into a well-supported clade that was sister to Klyxum and differed from members of that genus by mean genetic distances (uncorrected p) ranging from 1.0% (± 0.06% SD) at COI to 4.4% (±1.7% SD) at 28S rDNA (Fig.
Phylogenetic relationships among species of Ofwegenum gen. nov. and other genera of the family Cladiellidae A maximum likelihood (ML) analysis of concatenated mtMutS and 28S rDNA barcoding loci. Numbers at nodes: ML bootstrap percentage (10,000 ultrafast bootstrap replicates)/Bayesian posterior probability. Asterisks indicate samples that are included in analysis of conserved elements B maximum likelihood analysis of 1,213 conserved element loci (75% occupancy matrix). All nodes have 100% bootstrap support and SH-aLRT = 100 unless indicated. All Co_ numbers are
A total of 2,509 loci (out of 3,023 targeted loci) was recovered from the assembled contigs, including the seven outgroup taxa (Table
The maximum likelihood analysis recovered an Ofwegenum clade that was strongly supported and genetically distinct from the outgroup taxa (Klyxum spp. and Cladiella australis) (Fig.
The phylogenetic position of Ofwegenum gen. nov. as sister to the genus Klyxum in family Cladiellidae was well supported by both single-locus mitochondrial genes as well as the multi-locus nuclear gene analysis (Fig.
Ofwegenum gen. nov. also shares with other genera of Cladiellidae a relatively invariant mitochondrial genome marked by little to no genetic differentiation among species at the loci commonly used for DNA barcoding (mtMutS, COI) (
Although it is rarely encountered in nature, Ofwegenum is nonetheless present in the commercial aquarium trade. We examined and sequenced a specimen (SMNHTAU_Co_38223) obtained from a supplier in the U.S. that is genetically and morphologically most similar to O. coronalucis (Fig.
Here we established a new genus, Ofwegenum gen. nov., for Metalcyonium verseveldti Benayahu, 1982. We have redescribed the type of that species and establish it as a new combination, O. verseveldti. In addition, we have described three new species of Ofwegenum from shallow-water coral reefs in the Indo-Pacific region, bringing the total number of species in the genus to four. This genus appears to be rare on coral reefs, with each species known from only a few localities, some of which have been extensively explored. The four species have distinct, non-overlapping geographical distributions, and are currently known only from the northern Red Sea (O. verseveldti), Arabian Sea (O. coronalucis), central Indian Ocean (O. kloogi), and northeastern Australia (O. colli) (Fig.
We thank Phil Alderslade, The Commonwealth Scientific and Industrial Research Organization (CSIRO), Hobart, Tasmania, Australia for providing material and S. Horner, Museum and Art Gallery of the Northern Territory, Darwin, Australia for curatorial information. We also thank the Interuniversity Institute for Marine Sciences, Eilat, Israel for use of their facilities, and S. Eibinder, Haifa University, Israel, for collecting the mesophotic samples. Collections in La Réunion were made possible due to a grant to Y. Benayahu from the “Conseil Régional de la Réunion” and “Association Parc Marin de la Réunion”. We thank E. Tessier, B. Cauvin, Y. Clain and the team of guards of the “Association Parc Marin de la Réunion” for help during the field work. We thank C. Bourmaud, J. P. Quod and M. Aknin and D. Huchon for help and advice during the La Réunion expedition. We thank Z. Kuplik for professional curatorial skills, K. Erickson for laboratory assistance, A. Quattrini for assistance with data analysis, V. Wexler for digital editing, and N. Paz for editorial assistance. Daniel Knop provided us with high resolution photos of his aquarium specimen. Environment Authority of Oman is appreciated for granting the collection permits, and we thank M.R. Claereboudt, S. Dobretsov (Sultan Qaboos University, Oman), G. Paulay (Florida Natural History Museum) and S. Wilson (Five Oceans Environmental Services LLC) for their support in Oman. J.H. Ausubel (Rockefeller University), and L. Brown (Lounsbery Foundation) are greatly appreciated for their support and encouragement to the last author. We would like to thank O. Breedy and J. Reimer for their constructive comments and suggestions, which helped improve the manuscript.
The authors have declared that no competing interests exist.
No ethical statement was reported.
This research received support from BSF–2019624 to Y. Benayahu and NSF DEB–1929319 and DEB–1856245 to C.S. McFadden. The research at
Conceptualization: YB, CSM. Formal analysis: KSN, YB, CSM. Funding acquisition: YB, CSM. Project administration: CSM. Writing – original draft: CSM, YB, KSN. Writing – review and editing: CSM, YB, KSN.
Catherine S. McFadden https://orcid.org/0000-0002-8519-9762
Yehuda Benayahu https://orcid.org/0000-0002-6999-0239
Kaveh Samimi-Namin https://orcid.org/0000-0002-7744-9944
All of the data that support the findings of this study are available in the main text.