Research Article |
Corresponding author: Zhi Wang ( zhiwang00kxy@xmu.edu.cn ) Academic editor: Christopher Glasby
© 2023 Shan Tong, Deyuan Yang, Jian-Wen Qiu, Caihuan Ke, Zhi Wang.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Tong S, Yang D, Qiu J-W, Ke C, Wang Z (2023) Podarkeopsis chinensis sp. nov. (Annelida, Hesionidae) from southeastern China. ZooKeys 1173: 339-355. https://doi.org/10.3897/zookeys.1173.106112
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Podarkeopsis chinensis sp. nov. (Annelida, Hesionidae) is described based on specimens collected from the coast of southeast China. It is the first Podarkeopsis species described from the Indo-Pacific, although there are already nine valid Podarkeopsis species known from other parts of the world. This new species can be distinguished from the other Podarkeopsis species in having a palpostyle as long as the palpophore and double aciculae in both notopodia and neuropodia, and in bearing bifid furcate chaetae which have a smooth base on the shorter tine. A phylogenetic analysis based on the concatenated sequences of five gene fragments (COI, 16S rRNA, 18S rRNA, 28S rRNA, and histone H3) from 18 specimens of P. chinensis sp. nov. showed that they formed a monophyletic clade that is sister to P. levifuscina. K2P genetic distances indicated that the four gene fragments (COI, 16S rRNA, 18S rRNA, and 28S rRNA) of P. chinensis sp. nov. diverged from the corresponding sequences of the closest related species of Podarkeopsis in GenBank and BOLD Systems by 21.1–27.5%, 20.3–23.1%, 0.1–0.2%, and 2.1–3.2%. An identification key is provided for species in the genus Podarkeopsis.
Identification key, Indo-Pacific, molecular phylogeny, morphology, new species, polychaete, systematics
Podarkeopsis Laubier, 1961 is a genus of small-bodied polychaetes in the family Hesionidae and currently comprises nine species (
Type localities of Podarkeopsis species around the world (red spots and numbers, data from
Currently, there are only a few studies with a description or specimen records of Podarkeopsis from Indo-Pacific.
In this study, we describe and illustrate a new species, Podarkeopsis chinensis sp. nov., based on specimens collected from Daya Bay, Guangdong and ZhaoAn Bay, Fujian in southern China. We sequenced five gene fragments (COI, 16S rRNA, 18S rRNA, 28S rRNA, and histone H3) to determine the phylogenetic position of the new species within Podarkeopsis.
Eighteen specimens (holotype: XMU-Pol-2021-105, paratype 1: XMU-Pol-2021-106, paratype 2 MBM287621, paratype 3: XMU-Pol-2021-197, paratype 4: XMU-Pol-2021-201, paratype 5: XMU-Pol-2021-203, paratype 6: XMU-Pol-2021-204, paratype 7: XMU-Pol-2021-205, paratype 8: XMU-Pol-2021-207, paratype 9: XMU-Pol-2021-208, paratype 10: XMU-Pol-2021-209, paratype 11: XMU-Pol-2021-213, paratype 12: XMU-Pol-2021-214, paratype 13: XMU-Pol-2021-215, paratype 14: MBM287622, paratype 15: XMU-Pol-2021-221, paratype 16: XMU-Pol-2021-223, paratype 17: XMU-Pol-2021-224) were collected from the coastal waters of southeast China in 2021 (see Materials examined for details). Sediments were sorted with a 0.5 mm sieve, and the retained materials including the specimens were anaesthetized with 7% MgCl2 solution, transferred to 50% ethanol for preliminary fixation, and then to 100% ethanol for final fixation. Podarkeopsis specimens were picked out under a stereomicroscope M165C in the laboratory, preliminarily identified to species, and preserved for further morphological and molecular analyses. Two specimens of P. chinensis sp. nov. (paratype 2, paratype 14) were deposited in the Marine Biological Museum, Chinese Academy of Sciences (
Selected parapodia of the holotype (
Eighteen specimens of Podarkeopsis chinensis sp. nov. were used for DNA extraction. For each specimen, a few segments were dissected, and genomic DNA was extracted with a DNeasy Blood & Tissue Kit (QIAGEN). Five primer pairs were used to amplify corresponding gene fragments, viz., PolyLCO and PolyHCO for the mitochondrial COI gene fragment (
The sequences of the five gene fragments generated in this study, together with those of all corresponding Podarkeopsis and two Oxydromus species (outgroup) available in GenBank (https://www.ncbi.nlm.nih.gov/Genbank) and BOLD (http://www.barcodinglife.org), were used for phylogenetic analyses (Table
Sequence accession numbers (GenBank and BOLD) and specimen information of Podarkeopsis and Oxydromus used in this study.
Taxon | Origin | Voucher/Sample ID | COI | 16S rRNA | 18S rRNA | 28S rRNA | histone H3 | Reference |
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Oxydromus obscurus | North Carolina, USA | GNM 86189 | KJ855073 | KJ855068 | – | KJ855080 | – |
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Oxydromus microantennatus | Australia | GNM 86192 | KJ855072 | KJ855067 | – | KJ855079 | – |
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Podarkeopsis arenicolus | France | SMNH 83509 | JN571827 | JN571879 | JN571889 | DQ442609 | – |
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Podarkeopsis capensis | Saudi Arabia | Itsastk13-P113 | KT307681 | – | – | – | – |
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*Podarkeopsis glabrus | Washington, USA | 2849_DNA | BBPS549-19 | – | – | – | – | BOLD direct submission |
*Podarkeopsis glabrus | Washington, USA | 2852_DNA | BBPS550-19 | – | – | – | – | BOLD direct submission |
*Podarkeopsis glabrus | Washington, USA | 2854_DNA | BBPS551-19 | – | – | – | – | BOLD direct submission |
*Podarkeopsis glabrus | Washington, USA | 2857_DNA | BBPS552-19 | – | – | – | – | BOLD direct submission |
*Podarkeopsis glabrus | Washington, USA | 2863_DNA | BBPS553-19 | – | – | – | – | BOLD direct submission |
*Podarkeopsis glabrus | California, USA | MBI-SCCWRP-00412 | CMBIA476-11 | – | – | – | – | BOLD direct submission |
Podarkeopsis helgolandicus | Sweden | SE07DNA4 | JN631311 | – | JN631331 | JN631344 | – |
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Podarkeopsis levifuscina | Florida, USA | SERCINVERT2330 | OQ323143 | – | – | – | – | Genbank direct submission |
Podarkeopsis perkinsi | California, USA | SIO-BIC A2339 | JN571828 | JN571881 | JN571892 | JN571901 | – |
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*Podarkeopsis sp. (as Oxydromus angustifrons) | Laizhou Bay, Shandong, China | BIOUG03550-B01 | HZPLY108-12 | – | – | – | – | BOLD direct submission |
*Podarkeopsis sp. (as Oxydromus angustifrons) | Northern Yellow Sea,China | BIOUG06836-E09 | HZPLY627-13 | – | – | – | – | BOLD direct submission |
*Podarkeopsis sp. (as Oxydromus angustifrons) | Laizhou Bay, China | BIOUG06836-E11 | HZPLY629-13 | – | – | – | – | BOLD direct submission |
Podarkeopsis chinensis sp. nov. | Daya Bay, Guangdong, China |
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MZ322693 | MZ330781 | OK044387 | MZ344143 | MZ272434 | This study |
Podarkeopsis chinensis sp. nov. | Daya Bay, Guangdong, China |
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MZ322694 | MZ330782 | OK044388 | – | MZ272435 | This study |
Podarkeopsis chinensis sp. nov. | Daya Bay, Guangdong, China | MBM287621 | MZ873348 | MZ890235 | OK044406 | MZ870391 | MZ695068 | This study |
Podarkeopsis chinensis sp. nov. | Daya Bay, Guangdong, China |
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MZ873349 | MZ890238 | OK044409 | MZ870394 | MZ695069 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820673 | MZ890241 | OK044410 | MZ820369 | MZ889051 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820674 | MZ890243 | OK044412 | MZ820371 | MZ889053 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820675 | MZ890244 | OK044413 | MZ820372 | MZ889054 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820676 | MZ890245 | OK044414 | MZ820373 | MZ889055 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820677 | MZ890247 | OK044415 | MZ820375 | MZ889057 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820678 | MZ890248 | OK044416 | MZ820376 | MZ889058 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820679 | MZ890249 | MZ870412 | MZ820377 | MZ889059 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820680 | MZ890253 | OK044419 | MZ820381 | MZ889063 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820681 | MZ890254 | OK044420 | MZ820382 | MZ889064 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ820682 | MZ890255 | OK044421 | MZ870397 | MZ889065 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China | MBM287622 | MZ820683 | MZ890256 | OK044422 | MZ820383 | MZ889066 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ873355 | MZ890261 | MZ870417 | MZ870398 | MZ889071 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ873357 | MZ890263 | OK044426 | MZ870400 | MZ889073 | This study |
Podarkeopsis chinensis sp. nov. | ZhaoAn Bay, Fujian, China |
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MZ873358 | MZ890264 | OK044427 | MZ870401 | MZ889074 | This study |
K2P genetic distances represent the standard in DNA barcoding literature and therefore facilitate comparisons (
Family Hesionidae Grube, 1850
Subfamily Ophiodrominae Pleijel, 1998
Tribe Ophiodromini Pleijel, 1998
Podarkeopsis galangaui Laubier, 1961.
Banyuls, France.
Holotype
: China; Guangdong, Daya Bay, Guishan Island; 22°49'4"N, 114°47'11"E; 1 April 2021; Deyuan Yang, Zhi Wang leg.; intertidal zone;
Two pairs of eyes arranged in a trapezoid shape. Palps one pair, biarticulated, palpostyle as long as the palpophore. Double aciculae in both notopodia and neuropodia. Notopodial furcate chaetae present, base of the shorter tine smooth.
(based on holotype, unless otherwise stated). Anterior fragment with 1–21 chaetigers. Body cylindrical. Fixed specimens uniformly pale (Fig.
Morphology of Podarkeopsis chinensis sp. nov. A, B, I holotype (
Prostomium twice as wide as long. Eyes two pairs, placed towards the posterior prostomial margin, trapezoidally arranged, anterior pair kidney-shaped, larger than posterior pair, posterior pair oval (Fig.
Parapodia sesquiramous with acicula in cirrophore and without protruding notopodial chaetae in chaetigers 1–3 (Fig.
Parapodia of Podarkeopsis chinensis sp. nov. A–I parapodia of holotype (
Notochaetae 3 types. Furcate chaetae 2 or 3, bifid, base of the shorter tine smooth, longer tine about 2.3 times as long as shorter one (Fig.
Chaetae of Podarkeopsis chinensis sp. nov. A, C, D, F–H holotype (
Examination of the holotype and several paratypes of P. chinensis sp. nov. revealed different numbers of the three kinds of notochaetae. In the holotype, there were 2 or 3 furcate chaetae, 1 or 2 acicular chaetae, and 1 or 2 capillary chaetae. However, several paratypes had 2–4 furcate chaetae, 1–4 acicular chaetae, and 1–3 capillary chaetae. The number of these chaetae may be related to the developmental stages or environmental conditions.
The new species can be distinguished from the other nine species of the genus in having 1) median antenna about half as long as lateral ones, while P. arenicolus, P. brevipalpa, P. galangaui, P. glabrus, and P. helgolandicus have median antenna shorter than half of the lateral ones (
The specific name chinensis is an adjective in the nominative singular, derived from China, where the specimens were collected. The suggested formal Chinese name for this species is “中国健足虫”.
Intertidal, shallow subtidal muddy sediment.
Podarkeopsis chinensis sp. nov. is currently known from Daya Bay, Guangdong and ZhaoAn Bay, Fujian, China. It is expected that this species is widely distributed along the coast of southeast China.
The ML tree and BI tree, reconstructed based on the 3943-bp concatenated sequences, showed consistent topologies clustering the eight analyzed Podarkeopsis species within a single clade with high support values (BS = 100; BPP = 1) (Fig.
Phylogenetic trees of Podarkeopsis based on 3943-bp concatenated sequences of 636 bp COI, 496 bp 16S rRNA, 1554 bp 18S rRNA, 954 bp 28S rRNA and 304 bp histone H3 gene fragments A maximum-likelihood (ML) tree B Bayesian-inference (BI) tree. Vouchers (isolates) and accession numbers of the analyzed species are listed in Table
The average intraspecific K2P genetic distances of Podarkeopsis chinensis sp. nov. were 0.2% for COI and 16S rRNA gene fragments, 0.0% for 18S rRNA gene fragment, 0.1% for 28S rRNA gene fragment, and 0.5% for histone H3 gene fragment (Table
Intraspecific and interspecific K2P genetic distances of the five gene fragments of all available Podarkeopsis species.
Species | N | Species | |||||||
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | ||
COI (585 bp) | |||||||||
1. Podarkeopsi arenicolus | 1 | – | |||||||
2. Podarkeopsi capensis | 1 | 0.005 | – | ||||||
3. Podarkeopsi glabrus | 6 | 0.221 | 0.235 | 0.003 | |||||
4. Podarkeopsi helgolandicus | 1 | 0.227 | 0.224 | 0.265 | – | ||||
5. Podarkeopsi levifuscina | 1 | 0.232 | 0.230 | 0.250 | 0.240 | – | |||
6. Podarkeopsi perkinsi | 1 | 0.227 | 0.223 | 0.233 | 0.237 | 0.227 | – | ||
7. Podarkeopsis sp. (as Oxydromus angustifrons) | 3 | 0.218 | 0.223 | 0.258 | 0.227 | 0.225 | 0.250 | 0.009 | |
8. Podarkeopsi chinensis sp. nov. | 18 | 0.271 | 0.264 | 0.275 | 0.271 | 0.211 | 0.246 | 0.252 | 0.002 |
16S rRNA (389 bp) | |||||||||
1. Podarkeopsi arenicolus | 1 | – | |||||||
2. Podarkeopsi perkinsi | 1 | 0.192 | – | ||||||
3. Podarkeopsi chinensis sp. nov. | 18 | 0.203 | 0.231 | 0.002 | |||||
18S rRNA (854 bp) | |||||||||
1. Podarkeopsi arenicolus | 1 | – | |||||||
2. Podarkeopsi helgolandicus | 1 | 0.001 | – | ||||||
3. Podarkeopsi perkinsi | 1 | 0.002 | 0.001 | – | |||||
4. Podarkeopsi chinensis sp. nov. | 18 | 0.002 | 0.001 | 0.002 | 0.000 | ||||
28S rRNA (682 bp) | |||||||||
1. Podarkeopsi arenicolus | 1 | – | |||||||
2. Podarkeopsi helgolandicus | 1 | 0.019 | – | ||||||
3. Podarkeopsi perkinsi | 1 | 0.032 | 0.028 | – | |||||
4. Podarkeopsi chinensis sp. nov. | 18 | 0.021 | 0.023 | 0.032 | 0.001 | ||||
histone H3 (284 bp) | |||||||||
1. Podarkeopsi chinensis sp. nov. | 18 | 0.005 |
Although Podarkeopsis is a common genus of polychaete in intertidal and subtidal sediments, it has attracted little attention, possibly due to its small size, fragilility, and usually incomplete condition of fixed specimens. This genus can be clearly distinguished from other hesionid genera by several remarkable characteristics, such as having the pharynx with 10 papillae on the anterior edge (vs no papillae as in Oxydromus, Hesione, etc.; ~20 papillae as in Micropodarke) and bearing four pairs of tentacular cirri on both sides of the peristomium (vs three pairs as in Oxydromus, Micropodarke, Syllidia, etc.) (
The genus Podarkeopsis currently includes only nine valid species, and in this study we describe a tenth species, P. chinensis sp. nov., the first Podarkeopsis species described from the Indo-Pacific. Podarkeopsis cincinnata (Verrill, 1881) collected from New England, USA, has three pairs (instead of four as in other species of Podarkeopsis) of slender tentacular cirri on each side and about 12 papillae according to the original description; therefore, it is considered here an invalid species of Podarkeopsis, and its status could not be determined without checking the type material. In addition to P. chinensis sp. nov., we also found some other species of Podarkeopsis from the China seas, which indicated an underestimated species diversity of this genus. Given that many undescribed species of Podarkeopsis and several species in this region are potentially misidentified, we predict that further studies may lead to the discovery of more species.
In addition to the mentioned characteristics, we also noted two, minute teeth on the inner wall of the pharynx in all specimens of P. chinensis sp. nov. examined (Fig.
1 | Median antenna shorter than half of the lateral ones | 2 |
– | Median antenna as long as, or longer than half of the lateral ones | 5 |
2(1) | Lateral antennae as long as palps | P. glabrus (Hartman, 1961); California, USA |
– | Lateral antennae longer than palps | 3 |
3(2) | Palpophore as long as palpostyle | P. galangaui Laubier, 1961; France |
– | Palpophore longer than palpostyle | 4 |
4(3) | Ventral cirri markedly longer than neuropodial lobe; notopodial furcate chaetae with handle smooth | P. brevipalpa (Hartmann-Schröder, 1959); El Salvador |
– | Ventral cirri shorter than neuropodial lobe; notopodial furcate chaetae with handle denticulated | P. helgolandicus (Hilbig & Dittmer, 1979); Helgoland, Germany |
5(1) | Median antenna about 2/3 as long as lateral one | P. perkinsi Hilbig, 1992; California, USA |
– | Median antenna about half as long as lateral ones | 6 |
6(5) | Lateral antennae longer than palps | P. arenicolus (La Greca, 1946); Gulf of Naples |
– | Lateral antennae as long as, or barely longer than palps | 7 |
7(6) | Ventral cirri markedly shorter than neuropodial lobe | 8 |
– | Ventral cirri as long as, or barely shorter than neuropodial lobe; notopodial furcate chaetae with handle smooth | 9 |
8(7) | Median parapodia with double aciculae both in notopodia and neuropodia; notopodial furcate chaetae with handle denticulated | P. guadalupensis Amoureux, 1985; Caribbean Costa Rica |
– | Median parapodia with one acicula in notopodia and double aciculae in neuropodia; notopodial furcate chaetae with handle smooth | P. levifuscina Perkins, 1984; North Carolina, USA |
9(7) | Median parapodia with one acicula, both in notopodia and neuropodia; palpophore longer than palpostyle | P. capensis (Day, 1963); South Africa |
– | Median parapodia with double aciculae, both in notopodia and neuropodia; palpophore as long as palpostyle | Podarkeopsis chinensis sp. nov.; Southeast coast of China |
We thank Prof. Minggang Cai and Prof. Yongzhi Deng from Xiamen University, Mr Rongmao Li and Mr Huorong Chen from the Fisheries Resources Monitoring Center of Fujian Province for providing valuable survey information and logistic support. We also thank Prof. Shiqiang Zhou, Prof. Lizhe Cai, Kang Mei, Xiaoyu Zhao and Jingxiang Lin from Xiamen University, and Yuyao Li from Xiamen University Malaysia for collecting samples, and undergraduates Xiaolong Li, Penglong Liu, Dehao Meng, Haoyu Qi, and Xinghan Wei from Xiamen University and Quan Ma and Shen Zhong from Jimei University for genomic DNA extraction and PCR. We wish to show our sincere gratitude to the reviewers, Dr Pat Hutchings, and Dr Alexandra Rizzo, ZooKeys subject editor, Dr Christopher Glasby, and ZooKeys copy editors, Robert Forsyth and Zdravka Zorkova for their helpful comments and suggestions on the manuscript.
The authors have declared that no competing interests exist.
No ethical statement was reported.
This work was supported by the Postdoctoral Science Foundation of China (2021M691866), the Undergraduate Innovation and Entrepreneurship Training Programs of Xiamen University (202110384077), the MEL Outstanding Postdoctoral Scholarship, Lantau Conservation Fund of Hong Kong (RE-2020-22), Investigation on Marine Environment and Ecological Resources of Fujian Fishing Port Construction Project (2021), and Adjustment Funds Procurement Item of the Guangdong Daya Bay Aquatic Resources Provincial Nature Reserve Special Project (GDJR2021001).
ZW, CK and JWQ designed this project and jointly supervised this work. ZW and DY collected the samples. ST and DY conducted the morphological analyses, molecular experiments and data analyses. ST wrote the manuscript. All authors critically reviewed and approved the manuscript.
Shan Tong https://orcid.org/0009-0008-4206-974X
Deyuan Yang https://orcid.org/0000-0003-3735-9909
Jian-Wen Qiu https://orcid.org/0000-0002-1541-9627
Caihuan Ke https://orcid.org/0000-0002-7288-3565
All of the data that support the findings of this study are available in the main text.