A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements

Shahan Derkarabetian; James Starrett; Nobuo Tsurusaki; Darrell Ubick; Stephanie Castillo; Marshal Hedin

doi:10.3897/zookeys.760.24937

Joel Ledford, Shahan Derkarabetian, Carles Ribera, James Starrett, Jason E. Bond, Charles Griswold, Marshal Hedin (2021)
Phylogenomics and biogeography of leptonetid spiders (Araneae : Leptonetidae). Invertebrate Systematics 35: 332.

DOI: 10.1071/IS20065

Jesús A. Cruz-López, Rodrigo Monjaraz-Ruedas, Pío A. Colmenares, Oscar F. Francke (2021)
Historical biogeography of a neglected family of armoured harvestmen (Opiliones : Laniatores : Icaleptidae) with the first record and a new genus for tropical Mesoamerica. Invertebrate Systematics 35: 493.

DOI: 10.1071/IS20008

Y Miles Zhang, Jason L Williams, Andrea Lucky, Wiegmann Brian (2019)
Understanding UCEs: A Comprehensive Primer on Using Ultraconserved Elements for Arthropod Phylogenomics. Insect Systematics and Diversity 3: .

DOI: 10.1093/isd/ixz016

Sarah L. Boyer, Shannon R. Dohr, Madison S. Tuffield, Yoonjin Shu, Ciara D. Moore, Katherine M. Hahn, Rainah S. Ward, Phuong Nguyen, Rina Morisawa, Gonzalo Giribet (2022)
Diversity and distribution of the New Zealand endemic mite harvestman genus. Invertebrate Systematics 36: 372.

DOI: 10.1071/IS21044

Marshal Hedin, Shahan Derkarabetian, Adan Alfaro, Martín J. Ramírez, Jason E. Bond (2019)
Phylogenomic analysis and revised classification of atypoid mygalomorph spiders (Araneae, Mygalomorphae), with notes on arachnid ultraconserved element loci. PeerJ 7: e6864.

DOI: 10.7717/peerj.6864

Ligia R. Benavides, Julia G. Cosgrove, Mark S. Harvey, Gonzalo Giribet (2019)
Phylogenomic interrogation resolves the backbone of the Pseudoscorpiones tree of life. Molecular Phylogenetics and Evolution 139: 106509.

DOI: 10.1016/j.ympev.2019.05.023

Peter F. Cowman, Andrea M. Quattrini, Tom C.L. Bridge, Gregory J. Watkins-Colwell, Nur Fadli, Mila Grinblat, T. Edward Roberts, Catherine S. McFadden, David J. Miller, Andrew H. Baird (2020)
An enhanced target-enrichment bait set for Hexacorallia provides phylogenomic resolution of the staghorn corals (Acroporidae) and close relatives. Molecular Phylogenetics and Evolution 153: 106944.

DOI: 10.1016/j.ympev.2020.106944

Shahan Derkarabetian, James Starrett, Marshal Hedin (2022)
Using natural history to guide supervised machine learning for cryptic species delimitation with genetic data. Frontiers in Zoology 19: .

DOI: 10.1186/s12983-022-00453-0

Juan Moles, Gonzalo Giribet (2021)
A polyvalent and universal tool for genomic studies in gastropod molluscs (Heterobranchia). Molecular Phylogenetics and Evolution 155: 106996.

DOI: 10.1016/j.ympev.2020.106996

Arnaud Faille, Louis Deharveng (2021)
The Coume Ouarnède System, a Hotspot of Subterranean Biodiversity in Pyrenees (France). Diversity 13: 419.

DOI: 10.3390/d13090419

Junxia Zhang, Zhaoyi Li, Jiaxing Lai, Zhisheng Zhang, Feng Zhang (2023)
A novel probe set for the phylogenomics and evolution of RTA spiders . Cladistics 39: 116.

DOI: 10.1111/cla.12523

Vera Opatova, Chris A Hamilton, Marshal Hedin, Laura Montes De Oca, Jiři Král, Jason E Bond, Brian Wiegmann (2020)
Phylogenetic Systematics and Evolution of the Spider Infraorder Mygalomorphae Using Genomic Scale Data. Systematic Biology 69: 671.

DOI: 10.1093/sysbio/syz064

Christian Bartel, Shahan Derkarabetian, Jason A. Dunlop (2022)
A new species of Laniatores (Arachnida: Opiliones) from Eocene Baltic amber with notes on the evolution of Insidiatores. Arachnologische Mitteilungen: Arachnology Letters 64: .

DOI: 10.30963/aramit6406

Shahan Derkarabetian, Stephanie Castillo, Peter K. Koo, Sergey Ovchinnikov, Marshal Hedin (2019)
A demonstration of unsupervised machine learning in species delimitation. Molecular Phylogenetics and Evolution 139: 106562.

DOI: 10.1016/j.ympev.2019.106562

Guilherme Gainett, Prashant P Sharma, Nathália Fernandes, Ricardo Pinto-Da-Rocha, Gonzalo Giribet, Rodrigo Hirata Willemart (2019)
Evolution of a sensory cluster on the legs of Opiliones (Arachnida) informs multi-level phylogenetic relationships. Zoological Journal of the Linnean Society 187: 143.

DOI: 10.1093/zoolinnean/zlz016

Jochen Martens (2021)
Vier Dekaden Weberknechtforschung mit dem 64. Band der ‚Tierwelt Deutschlands‘ – Rückblick, aktueller Stand und Ausblick. Arachnologische Mitteilungen: Arachnology Letters 62: .

DOI: 10.30963/aramit6205

Shahan Derkarabetian, Ligia R. Benavides, Gonzalo Giribet (2019)
Sequence capture phylogenomics of historical ethanol‐preserved museum specimens: Unlocking the rest of the vault. Molecular Ecology Resources 19: 1531.

DOI: 10.1111/1755-0998.13072

Wayne P. Maddison, David R. Maddison, Shahan Derkarabetian, Marshal Hedin (2020)
Sitticine jumping spiders: phylogeny, classification, and chromosomes (Araneae, Salticidae, Sitticini). ZooKeys 925: 1.

DOI: 10.3897/zookeys.925.39691

Erik Ciaccio, Andrew Debray, Marshal Hedin (2022)
Phylogenomics of paleoendemic lampshade spiders (Araneae, Hypochilidae, Hypochilus), with the description of a new species from montane California. ZooKeys 1086: 163.

DOI: 10.3897/zookeys.1086.77190

Gonzalo Giribet, Matthew Shaw, Arianna Lord, Shahan Derkarabetian, Prashant Sharma (2022)
Closing a biogeographic gap: a new pettalid genus from South Australia (Arachnida : Opiliones : Cyphophthalmi : Pettalidae) with a UCE-based phylogeny of Cyphophthalmi. Invertebrate Systematics 36: 1002.

DOI: 10.1071/IS22043

Shahan Derkarabetian, Caitlin M. Baker, Marshal Hedin, Carlos E. Prieto, Gonzalo Giribet (2021)
Phylogenomic re-evaluation of Triaenonychoidea (Opiliones : Laniatores), and systematics of Triaenonychidae, including new families, genera and species. Invertebrate Systematics : .

DOI: 10.1071/IS20047

Christian Bartel, Jason A. Dunlop (2019)
Two laniatorid harvestmen (Opiliones: Cladonychiidae) from Eocene Baltic amber. Arachnologische Mitteilungen: Arachnology Letters 58: 9.

DOI: 10.30963/aramit5804

Caitlin M. Baker, Kate Sheridan, Shahan Derkarabetian, Abel Pérez-González, Sebastian Vélez, Gonzalo Giribet (2020)
Molecular phylogeny and biogeography of the temperate Gondwanan family Triaenonychidae (Opiliones : Laniatores) reveals pre-Gondwanan regionalisation, common vicariance, and rare dispersal. Invertebrate Systematics : .

DOI: 10.1071/IS19069

Wayne P. Maddison, Imara Beattie, Kiran Marathe, Paul Y. C. Ng, Nilani Kanesharatnam, Suresh P. Benjamin, Krushnamegh Kunte (2020)
A phylogenetic and taxonomic review of baviine jumping spiders (Araneae, Salticidae, Baviini). ZooKeys 1004: 27.

DOI: 10.3897/zookeys.1004.57526